RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 USP31Q70CQ4 1352 aa19.08■□□□□ 0.64
SYNCRIP-202ENST00000369622 SPC24Q8NBT2 197 aa19.08■□□□□ 0.64
SYNCRIP-202ENST00000369622 DNAJC2Q99543 621 aaKnown RBP19.08■□□□□ 0.64
SYNCRIP-202ENST00000369622 CHPF2Q9P2E5 772 aa19.08■□□□□ 0.64
SYNCRIP-202ENST00000369622 LGR6Q9HBX8 967 aa19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 ST7Q9NRC1 585 aa19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 CEP170BQ9Y4F5 1589 aaPredicted RBP19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 KCNQ3O43525 872 aa19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 CHAF1AQ13111 956 aaPredicted RBP19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 OGFRQ9NZT2 677 aa19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 STAP2Q9UGK3 403 aa19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 CNPY2Q9Y2B0 182 aa19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 ADAMTS13Q76LX8 1427 aa19.07■□□□□ 0.64
SYNCRIP-202ENST00000369622 FIBPO43427 364 aa19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 PEAK1Q9H792 1746 aa19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 WDR33Q9C0J8 1336 aaKnown RBP19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 ADCY5O95622 1261 aa19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 RASEFQ8IZ41 740 aa19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 INTS4Q96HW7 963 aaKnown RBP19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 RGS22Q8NE09 1264 aa19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 PYCARDQ9ULZ3 195 aa19.06■□□□□ 0.64
SYNCRIP-202ENST00000369622 HSPA4P34932 840 aa19.05■□□□□ 0.64
SYNCRIP-202ENST00000369622 CNTROBQ8N137 903 aa19.05■□□□□ 0.64
SYNCRIP-202ENST00000369622 SSH3Q8TE77 659 aa19.05■□□□□ 0.64
SYNCRIP-202ENST00000369622 AK2P54819 239 aa19.05■□□□□ 0.64
SYNCRIP-202ENST00000369622 DIAPH3Q9NSV4 1193 aa19.05■□□□□ 0.64
SYNCRIP-202ENST00000369622 AGLP35573 1532 aa19.05■□□□□ 0.64
SYNCRIP-202ENST00000369622 CASTP20810 708 aaKnown RBP19.04■□□□□ 0.64
SYNCRIP-202ENST00000369622 KIF1BPQ96EK5 621 aa19.04■□□□□ 0.64
SYNCRIP-202ENST00000369622 SNX14Q9Y5W7 946 aa19.04■□□□□ 0.64
SYNCRIP-202ENST00000369622 SMC3Q9UQE7 1217 aa19.04■□□□□ 0.64
SYNCRIP-202ENST00000369622 CHMP3Q9Y3E7 222 aa19.04■□□□□ 0.64
SYNCRIP-202ENST00000369622 MAP3K5Q99683 1374 aa19.04■□□□□ 0.64
SYNCRIP-202ENST00000369622 CCDC66A2RUB6 948 aa19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 TEFQ10587 303 aa19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 LMOD2Q6P5Q4 547 aa19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 ANKRD7Q92527 254 aa19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 V9GYY5 206 aaPredicted RBP19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 NCBP1Q09161 790 aaKnown RBP19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 MPRIPQ6WCQ1 1025 aa19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 C9orf78Q9NZ63 289 aaPredicted RBP19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 KDRP35968 1356 aa19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 PA2G4Q9UQ80 394 aaKnown RBP19.03■□□□□ 0.64
SYNCRIP-202ENST00000369622 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.02■□□□□ 0.64
SYNCRIP-202ENST00000369622 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
SYNCRIP-202ENST00000369622 SGSM2O43147 1006 aa19.02■□□□□ 0.64
SYNCRIP-202ENST00000369622 CCDC83Q8IWF9 413 aa19.02■□□□□ 0.64
SYNCRIP-202ENST00000369622 PI4K2BQ8TCG2 481 aa19.02■□□□□ 0.64
SYNCRIP-202ENST00000369622 AKAP12Q02952 1782 aa19.02■□□□□ 0.64
SYNCRIP-202ENST00000369622 RAB11FIP3O75154 756 aa19.02■□□□□ 0.63
SYNCRIP-202ENST00000369622 VPS37CA5D8V6 355 aaPredicted RBP19.01■□□□□ 0.63
SYNCRIP-202ENST00000369622 TERF2Q15554 542 aa19.01■□□□□ 0.63
SYNCRIP-202ENST00000369622 PRPF40BQ6NWY9 871 aaKnown RBP19.01■□□□□ 0.63
SYNCRIP-202ENST00000369622 NRKQ7Z2Y5 1582 aa19.01■□□□□ 0.63
SYNCRIP-202ENST00000369622 PHF14O94880 888 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 SYT1P21579 422 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 JAKMIP1Q96N16 626 aaKnown RBP19■□□□□ 0.63
SYNCRIP-202ENST00000369622 CTNNA3Q9UI47 895 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 HCLS1P14317 486 aaPredicted RBP19■□□□□ 0.63
SYNCRIP-202ENST00000369622 AIMP1Q12904 312 aaKnown RBP19■□□□□ 0.63
SYNCRIP-202ENST00000369622 CLASRPQ8N2M8 674 aaKnown RBP19■□□□□ 0.63
SYNCRIP-202ENST00000369622 LRRC59Q96AG4 307 aaKnown RBP19■□□□□ 0.63
SYNCRIP-202ENST00000369622 FEZ1Q99689 392 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 LIMCH1Q9UPQ0 1083 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 NPHP1O15259 732 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 STX6O43752 255 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 KCNA6P17658 529 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 TNNT3P45378 269 aaPredicted RBP19■□□□□ 0.63
SYNCRIP-202ENST00000369622 RUFY3Q7L099 469 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 TEX2Q8IWB9 1127 aa19■□□□□ 0.63
SYNCRIP-202ENST00000369622 RAD50Q92878 1312 aa18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 NBPF6Q5VWK0 638 aa18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 NBPF4Q96M43 638 aa18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 LARGE1O95461 756 aa18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 IFIT2P09913 472 aaKnown RBP18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 C16orf45Q96MC5 204 aaPredicted RBP18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 SETD1BQ9UPS6 1966 aaKnown RBP18.99■□□□□ 0.63
SYNCRIP-202ENST00000369622 ZSCAN22P10073 491 aaPredicted RBP18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 GABPB1Q06547 395 aaPredicted RBP18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 PTH1RQ03431 593 aa18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 NECAB1Q8N987 351 aa18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 LSG1Q9H089 658 aaKnown RBP18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 PLEKHG1Q9ULL1 1385 aa18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 EIF4A1P60842 406 aaKnown RBP18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 CWF19L2Q2TBE0 894 aaKnown RBP18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 ADCK5Q3MIX3 580 aa18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 ZNF530Q6P9A1 599 aaPredicted RBP18.98■□□□□ 0.63
SYNCRIP-202ENST00000369622 DIP2BQ9P265 1576 aa18.97■□□□□ 0.63
SYNCRIP-202ENST00000369622 BEND3Q5T5X7 828 aa18.97■□□□□ 0.63
SYNCRIP-202ENST00000369622 GIMAP6Q6P9H5 292 aa18.97■□□□□ 0.63
SYNCRIP-202ENST00000369622 ZNF592Q92610 1267 aa18.97■□□□□ 0.63
SYNCRIP-202ENST00000369622 TCEANC2Q96MN5 208 aa18.97■□□□□ 0.63
SYNCRIP-202ENST00000369622 SIL1Q9H173 461 aa18.97■□□□□ 0.63
SYNCRIP-202ENST00000369622 SSH2Q76I76 1423 aa18.97■□□□□ 0.63
SYNCRIP-202ENST00000369622 GJB2P29033 226 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms