RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
PHGDH-202ENST00000369409 C9orf78Q9NZ63 289 aaPredicted RBP20.98■□□□□ 0.95
PHGDH-202ENST00000369409 KCNQ2O43526 872 aa20.97■□□□□ 0.95
PHGDH-202ENST00000369409 SBF2Q86WG5 1849 aa20.96■□□□□ 0.95
PHGDH-202ENST00000369409 PNMA6EA0A0J9YXQ4 647 aa20.96■□□□□ 0.95
PHGDH-202ENST00000369409 COL5A3P25940 1745 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-202ENST00000369409 NEURL1BA8MQ27 555 aa20.96■□□□□ 0.95
PHGDH-202ENST00000369409 ZNF330Q9Y3S2 320 aaPredicted RBP20.96■□□□□ 0.95
PHGDH-202ENST00000369409 PALLDQ8WX93 1383 aa20.95■□□□□ 0.94
PHGDH-202ENST00000369409 ATP8B2P98198 1209 aa20.95■□□□□ 0.94
PHGDH-202ENST00000369409 RREB1Q92766 1687 aa20.95■□□□□ 0.94
PHGDH-202ENST00000369409 IBTKQ9P2D0 1353 aaPredicted RBP20.95■□□□□ 0.94
PHGDH-202ENST00000369409 GRM8O00222 908 aa20.94■□□□□ 0.94
PHGDH-202ENST00000369409 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
PHGDH-202ENST00000369409 BACH2Q9BYV9 841 aa20.94■□□□□ 0.94
PHGDH-202ENST00000369409 ZNF831Q5JPB2 1677 aa20.94■□□□□ 0.94
PHGDH-202ENST00000369409 ZBTB3Q9H5J0 574 aa20.93■□□□□ 0.94
PHGDH-202ENST00000369409 ANKRD36CQ5JPF3 1778 aa20.93■□□□□ 0.94
PHGDH-202ENST00000369409 UTYO14607 1347 aa20.93■□□□□ 0.94
PHGDH-202ENST00000369409 GCKRQ14397 625 aa20.92■□□□□ 0.94
PHGDH-202ENST00000369409 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
PHGDH-202ENST00000369409 BRWD3Q6RI45 1802 aa20.92■□□□□ 0.94
PHGDH-202ENST00000369409 ATP5J2-PTCD1G3V325 749 aa20.92■□□□□ 0.94
PHGDH-202ENST00000369409 APBB1O00213 710 aa20.92■□□□□ 0.94
PHGDH-202ENST00000369409 FAM182BQ5T319 152 aa20.92■□□□□ 0.94
PHGDH-202ENST00000369409 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
PHGDH-202ENST00000369409 MYH14Q7Z406 1995 aaKnown RBP20.91■□□□□ 0.94
PHGDH-202ENST00000369409 LOC102724428A0A0B4J2F2 783 aa20.91■□□□□ 0.94
PHGDH-202ENST00000369409 SIK1P57059 783 aa20.91■□□□□ 0.94
PHGDH-202ENST00000369409 C8orf34Q49A92 452 aa20.91■□□□□ 0.94
PHGDH-202ENST00000369409 PPP1R42Q7Z4L9 355 aa20.91■□□□□ 0.94
PHGDH-202ENST00000369409 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
PHGDH-202ENST00000369409 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
PHGDH-202ENST00000369409 ATP6V1AP38606 617 aa20.9■□□□□ 0.94
PHGDH-202ENST00000369409 SSH3Q8TE77 659 aa20.9■□□□□ 0.94
PHGDH-202ENST00000369409 ZBTB47Q9UFB7 747 aaPredicted RBP20.9■□□□□ 0.94
PHGDH-202ENST00000369409 EXOC6BQ9Y2D4 811 aa20.9■□□□□ 0.94
PHGDH-202ENST00000369409 SEPT12Q8IYM1 358 aa20.9■□□□□ 0.94
PHGDH-202ENST00000369409 SUCLG2Q96I99 432 aa20.9■□□□□ 0.94
PHGDH-202ENST00000369409 HDAC5Q9UQL6 1122 aa20.9■□□□□ 0.94
PHGDH-202ENST00000369409 NUP98P52948 1817 aa20.89■□□□□ 0.94
PHGDH-202ENST00000369409 SRGAP3O43295 1099 aa20.89■□□□□ 0.93
PHGDH-202ENST00000369409 ONECUT3O60422 494 aaPredicted RBP20.89■□□□□ 0.93
PHGDH-202ENST00000369409 KIF6Q6ZMV9 814 aa20.89■□□□□ 0.93
PHGDH-202ENST00000369409 BCL11AQ9H165 835 aa20.89■□□□□ 0.93
PHGDH-202ENST00000369409 POLA2Q14181 598 aa20.88■□□□□ 0.93
PHGDH-202ENST00000369409 PTF1AQ7RTS3 328 aa20.88■□□□□ 0.93
PHGDH-202ENST00000369409 SMARCA5O60264 1052 aaPredicted RBP20.88■□□□□ 0.93
PHGDH-202ENST00000369409 ITPK1Q13572 414 aa20.88■□□□□ 0.93
PHGDH-202ENST00000369409 MTX1Q13505 466 aa20.87■□□□□ 0.93
PHGDH-202ENST00000369409 KAZALD1Q96I82 304 aa20.87■□□□□ 0.93
PHGDH-202ENST00000369409 LY75O60449 1722 aa20.86■□□□□ 0.93
PHGDH-202ENST00000369409 ARXQ96QS3 562 aa20.86■□□□□ 0.93
PHGDH-202ENST00000369409 BICC1Q9H694 974 aaKnown RBP20.86■□□□□ 0.93
PHGDH-202ENST00000369409 UBE3BQ7Z3V4 1068 aa20.86■□□□□ 0.93
PHGDH-202ENST00000369409 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
PHGDH-202ENST00000369409 CCDC87Q9NVE4 849 aa20.86■□□□□ 0.93
PHGDH-202ENST00000369409 MAP3K15Q6ZN16 1313 aa20.85■□□□□ 0.93
PHGDH-202ENST00000369409 A0A087WZG4 1122 aa20.85■□□□□ 0.93
PHGDH-202ENST00000369409 IL6STP40189 918 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-202ENST00000369409 CRKLP46109 303 aaKnown RBP20.85■□□□□ 0.93
PHGDH-202ENST00000369409 CWC25Q9NXE8 425 aaPredicted RBP20.85■□□□□ 0.93
PHGDH-202ENST00000369409 INTS5Q6P9B9 1019 aaKnown RBP20.84■□□□□ 0.93
PHGDH-202ENST00000369409 LRRCC1Q9C099 1032 aa20.84■□□□□ 0.93
PHGDH-202ENST00000369409 TAF1LQ8IZX4 1826 aa20.83■□□□□ 0.93
PHGDH-202ENST00000369409 C16orf71Q8IYS4 520 aaPredicted RBP20.83■□□□□ 0.92
PHGDH-202ENST00000369409 CCDC191Q8NCU4 936 aa20.83■□□□□ 0.92
PHGDH-202ENST00000369409 BCORQ6W2J9 1755 aa20.82■□□□□ 0.92
PHGDH-202ENST00000369409 SURF6O75683 361 aaKnown RBP20.82■□□□□ 0.92
PHGDH-202ENST00000369409 TCIRG1Q13488 830 aa20.82■□□□□ 0.92
PHGDH-202ENST00000369409 EPHA10Q5JZY3 1008 aa20.82■□□□□ 0.92
PHGDH-202ENST00000369409 NPM2Q86SE8 214 aaKnown RBP20.82■□□□□ 0.92
PHGDH-202ENST00000369409 OTUD7AQ8TE49 926 aaPredicted RBP20.82■□□□□ 0.92
PHGDH-202ENST00000369409 ISCA1Q9BUE6 129 aa20.82■□□□□ 0.92
PHGDH-202ENST00000369409 COL15A1P39059 1388 aa20.82■□□□□ 0.92
PHGDH-202ENST00000369409 CASP7P55210 303 aa20.81■□□□□ 0.92
PHGDH-202ENST00000369409 PLEKHM2Q8IWE5 1019 aa20.81■□□□□ 0.92
PHGDH-202ENST00000369409 GIGYF2Q6Y7W6 1299 aaKnown RBP20.81■□□□□ 0.92
PHGDH-202ENST00000369409 DZIP3Q86Y13 1208 aaKnown RBP20.81■□□□□ 0.92
PHGDH-202ENST00000369409 EIF5P55010 431 aaKnown RBP20.8■□□□□ 0.92
PHGDH-202ENST00000369409 HLFQ16534 295 aa20.8■□□□□ 0.92
PHGDH-202ENST00000369409 TUBGCP6Q96RT7 1819 aa20.8■□□□□ 0.92
PHGDH-202ENST00000369409 H7C1W4 665 aa20.79■□□□□ 0.92
PHGDH-202ENST00000369409 RTL5Q5HYW3 569 aaPredicted RBP20.79■□□□□ 0.92
PHGDH-202ENST00000369409 LINC00116Q8NCU8 138 aa20.79■□□□□ 0.92
PHGDH-202ENST00000369409 TBC1D2BQ9UPU7 963 aa20.79■□□□□ 0.92
PHGDH-202ENST00000369409 RAB11FIP3O75154 756 aa20.79■□□□□ 0.92
PHGDH-202ENST00000369409 KCNQ4P56696 695 aa20.79■□□□□ 0.92
PHGDH-202ENST00000369409 BMP2KLQ5H9B9 411 aa20.79■□□□□ 0.92
PHGDH-202ENST00000369409 PA2G4Q9UQ80 394 aaKnown RBP20.79■□□□□ 0.92
PHGDH-202ENST00000369409 ZNF772Q68DY9 489 aaPredicted RBP20.78■□□□□ 0.92
PHGDH-202ENST00000369409 HSP90AB4PQ58FF6 505 aa20.77■□□□□ 0.92
PHGDH-202ENST00000369409 HSP90AB3PQ58FF7 597 aa20.77■□□□□ 0.92
PHGDH-202ENST00000369409 NOP58Q9Y2X3 529 aaKnown RBP20.77■□□□□ 0.92
PHGDH-202ENST00000369409 MYH3P11055 1940 aa20.77■□□□□ 0.92
PHGDH-202ENST00000369409 TRIM28Q13263 835 aaKnown RBP20.77■□□□□ 0.92
PHGDH-202ENST00000369409 OS9Q13438 667 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-202ENST00000369409 RABL6Q3YEC7 729 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-202ENST00000369409 IL1RAPL2Q9NP60 686 aa20.77■□□□□ 0.92
PHGDH-202ENST00000369409 SCN7AQ01118 1682 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms