RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 PLA2G4AP47712 749 aa22.19■■□□□ 1.14
PRDM1-202ENST00000369091 CLCN6P51797 869 aa22.19■■□□□ 1.14
PRDM1-202ENST00000369091 LMOD3Q0VAK6 560 aa22.19■■□□□ 1.14
PRDM1-202ENST00000369091 HDGFL2Q7Z4V5 671 aaPredicted RBP22.19■■□□□ 1.14
PRDM1-202ENST00000369091 NECAB1Q8N987 351 aa22.19■■□□□ 1.14
PRDM1-202ENST00000369091 H2AFXP16104 143 aaPredicted RBP22.18■■□□□ 1.14
PRDM1-202ENST00000369091 CDC37L1Q7L3B6 337 aa22.18■■□□□ 1.14
PRDM1-202ENST00000369091 TSPYL1Q9H0U9 437 aa22.18■■□□□ 1.14
PRDM1-202ENST00000369091 IL1RAPL2Q9NP60 686 aa22.18■■□□□ 1.14
PRDM1-202ENST00000369091 NUTM1Q86Y26 1132 aa22.18■■□□□ 1.14
PRDM1-202ENST00000369091 CABP1Q9NZU7 370 aa22.18■■□□□ 1.14
PRDM1-202ENST00000369091 USP16Q9Y5T5 823 aa22.18■■□□□ 1.14
PRDM1-202ENST00000369091 PNMA6AP0CW24 399 aaPredicted RBP22.17■■□□□ 1.14
PRDM1-202ENST00000369091 KRT85P78386 507 aa22.17■■□□□ 1.14
PRDM1-202ENST00000369091 FILIP1Q7Z7B0 1213 aa22.17■■□□□ 1.14
PRDM1-202ENST00000369091 HYPKQ9NX55 129 aa22.17■■□□□ 1.14
PRDM1-202ENST00000369091 PTPRCP08575 1304 aa22.17■■□□□ 1.14
PRDM1-202ENST00000369091 FAM193AP78312 1265 aa22.17■■□□□ 1.14
PRDM1-202ENST00000369091 CREBRFQ8IUR6 639 aa22.17■■□□□ 1.14
PRDM1-202ENST00000369091 TFIP11Q9UBB9 837 aaKnown RBP22.17■■□□□ 1.14
PRDM1-202ENST00000369091 CCDC69A6NI79 296 aa22.16■■□□□ 1.14
PRDM1-202ENST00000369091 LSG1Q9H089 658 aaKnown RBP22.16■■□□□ 1.14
PRDM1-202ENST00000369091 SPG7Q9UQ90 795 aa22.16■■□□□ 1.14
PRDM1-202ENST00000369091 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
PRDM1-202ENST00000369091 CCZ1BP86790 482 aa22.16■■□□□ 1.14
PRDM1-202ENST00000369091 CCZ1P86791 482 aaPredicted RBP22.16■■□□□ 1.14
PRDM1-202ENST00000369091 CCAR2Q8N163 923 aaKnown RBP22.16■■□□□ 1.14
PRDM1-202ENST00000369091 CPSF1Q10570 1443 aaKnown RBP22.16■■□□□ 1.14
PRDM1-202ENST00000369091 NR1I2O75469 434 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 GNAI2P04899 355 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 STAP2Q9UGK3 403 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 SGSM2O43147 1006 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 MCM10Q7L590 875 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 TMX1Q9H3N1 280 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 CLSTN2Q9H4D0 955 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 RSPH14Q9UHP6 348 aa22.15■■□□□ 1.14
PRDM1-202ENST00000369091 SYT10Q6XYQ8 523 aa22.14■■□□□ 1.14
PRDM1-202ENST00000369091 GOLGA6L4A6NEF3 574 aa22.14■■□□□ 1.13
PRDM1-202ENST00000369091 CDC25BP30305 580 aa22.14■■□□□ 1.13
PRDM1-202ENST00000369091 ADCK5Q3MIX3 580 aa22.14■■□□□ 1.13
PRDM1-202ENST00000369091 ST5P78524 1137 aa22.13■■□□□ 1.13
PRDM1-202ENST00000369091 A0A087WWV3 80 aa22.13■■□□□ 1.13
PRDM1-202ENST00000369091 TNNT3P45378 269 aaPredicted RBP22.13■■□□□ 1.13
PRDM1-202ENST00000369091 C11orf57Q6ZUT1 292 aaPredicted RBP22.13■■□□□ 1.13
PRDM1-202ENST00000369091 PRAM1Q96QH2 718 aa22.13■■□□□ 1.13
PRDM1-202ENST00000369091 CDK12Q9NYV4 1490 aaPredicted RBP22.13■■□□□ 1.13
PRDM1-202ENST00000369091 TTC21AQ8NDW8 1320 aa22.13■■□□□ 1.13
PRDM1-202ENST00000369091 KIF20BQ96Q89 1820 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 ME3Q16798 604 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 LARP1BQ659C4 914 aaKnown RBP22.12■■□□□ 1.13
PRDM1-202ENST00000369091 KRBA2Q6ZNG9 492 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 PDRG1Q9NUG6 133 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 MIS18AQ9NYP9 233 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 TRIM66O15016 1216 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 ARHGAP29Q52LW3 1261 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 JAKMIP1Q96N16 626 aaKnown RBP22.12■■□□□ 1.13
PRDM1-202ENST00000369091 ZRANB1Q9UGI0 708 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
PRDM1-202ENST00000369091 CWC27Q6UX04 472 aaKnown RBP22.11■■□□□ 1.13
PRDM1-202ENST00000369091 RBM43Q6ZSC3 357 aaKnown RBP22.11■■□□□ 1.13
PRDM1-202ENST00000369091 LCMT1Q9UIC8 334 aa22.11■■□□□ 1.13
PRDM1-202ENST00000369091 NPATQ14207 1427 aa22.11■■□□□ 1.13
PRDM1-202ENST00000369091 GORABQ5T7V8 394 aa22.11■■□□□ 1.13
PRDM1-202ENST00000369091 CHMP4CQ96CF2 233 aa22.11■■□□□ 1.13
PRDM1-202ENST00000369091 SPATA32Q96LK8 384 aa22.11■■□□□ 1.13
PRDM1-202ENST00000369091 DDX19AQ9NUU7 478 aaKnown RBP22.11■■□□□ 1.13
PRDM1-202ENST00000369091 SMARCE1Q969G3 411 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
PRDM1-202ENST00000369091 ELP1O95163 1332 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 GOLGA6L19H0YKK7 550 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 IQCB1Q15051 598 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 RNF20Q5VTR2 975 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 BICD2Q8TD16 824 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 ABCA9Q8IUA7 1624 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 HTATSF1O43719 755 aaKnown RBP22.1■■□□□ 1.13
PRDM1-202ENST00000369091 SEC31AO94979 1220 aaKnown RBP22.1■■□□□ 1.13
PRDM1-202ENST00000369091 C10orf67Q8IYJ2 551 aa22.1■■□□□ 1.13
PRDM1-202ENST00000369091 ZCCHC17Q9NP64 241 aaKnown RBP22.1■■□□□ 1.13
PRDM1-202ENST00000369091 RPGRIP1LQ68CZ1 1315 aa22.09■■□□□ 1.13
PRDM1-202ENST00000369091 MAP2P11137 1827 aaKnown RBP22.09■■□□□ 1.13
PRDM1-202ENST00000369091 SNW1Q13573 536 aaKnown RBP22.09■■□□□ 1.13
PRDM1-202ENST00000369091 RRS1Q15050 365 aaKnown RBP22.09■■□□□ 1.13
PRDM1-202ENST00000369091 CHL1O00533 1208 aa22.09■■□□□ 1.13
PRDM1-202ENST00000369091 NEMFO60524 1076 aa22.09■■□□□ 1.13
PRDM1-202ENST00000369091 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
PRDM1-202ENST00000369091 GYS2P54840 703 aa22.09■■□□□ 1.13
PRDM1-202ENST00000369091 COL9A3Q14050 684 aaPredicted RBP22.09■■□□□ 1.13
PRDM1-202ENST00000369091 LEO1Q8WVC0 666 aaPredicted RBP22.09■■□□□ 1.13
PRDM1-202ENST00000369091 RASSF4Q9H2L5 321 aa22.09■■□□□ 1.13
PRDM1-202ENST00000369091 PGBD1Q96JS3 809 aa22.08■■□□□ 1.13
PRDM1-202ENST00000369091 CDK19Q9BWU1 502 aa22.08■■□□□ 1.13
PRDM1-202ENST00000369091 LRRFIP2Q9Y608 721 aaKnown RBP22.08■■□□□ 1.13
PRDM1-202ENST00000369091 TTC21BQ7Z4L5 1316 aa22.08■■□□□ 1.13
PRDM1-202ENST00000369091 AATKQ6ZMQ8 1374 aa22.08■■□□□ 1.12
PRDM1-202ENST00000369091 PRPF40BQ6NWY9 871 aaKnown RBP22.08■■□□□ 1.12
PRDM1-202ENST00000369091 RGS22Q8NE09 1264 aa22.08■■□□□ 1.12
PRDM1-202ENST00000369091 MRFAP1L1Q96HT8 127 aa22.08■■□□□ 1.12
PRDM1-202ENST00000369091 L2HGDHQ9H9P8 463 aa22.07■■□□□ 1.12
PRDM1-202ENST00000369091 EPB41L2O43491 1005 aaKnown RBP22.07■■□□□ 1.12
PRDM1-202ENST00000369091 ZRANB2O95218 330 aaKnown RBP eCLIP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms