RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 RSPH1Q8WYR4 309 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 ZNF512BQ96KM6 892 aaPredicted RBP12.11□□□□□ -0.47
SCNM1-202ENST00000368905 CDC5LQ99459 802 aaKnown RBP12.11□□□□□ -0.47
SCNM1-202ENST00000368905 COL4A3BPQ9Y5P4 624 aa12.11□□□□□ -0.47
SCNM1-202ENST00000368905 CENPQQ7L2Z9 268 aaPredicted RBP12.1□□□□□ -0.47
SCNM1-202ENST00000368905 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
SCNM1-202ENST00000368905 NEUROD6Q96NK8 337 aa12.1□□□□□ -0.47
SCNM1-202ENST00000368905 VGLL3A8MV65 326 aa12.1□□□□□ -0.47
SCNM1-202ENST00000368905 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
SCNM1-202ENST00000368905 PSMC1P62191 440 aaKnown RBP12.1□□□□□ -0.47
SCNM1-202ENST00000368905 RASSF7Q02833 373 aa12.1□□□□□ -0.47
SCNM1-202ENST00000368905 PARP9Q8IXQ6 854 aa12.1□□□□□ -0.47
SCNM1-202ENST00000368905 DRC7Q8IY82 874 aa12.1□□□□□ -0.47
SCNM1-202ENST00000368905 RBM28Q9NW13 759 aaKnown RBP12.1□□□□□ -0.47
SCNM1-202ENST00000368905 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
SCNM1-202ENST00000368905 MAN1A1P33908 653 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 TERF1P54274 439 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 SATB1Q01826 763 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 TCP11L2Q8N4U5 519 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 GLMNQ92990 594 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 PIF1Q9H611 641 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 IFT122Q9HBG6 1241 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 IQSEC2Q5JU85 1478 aa12.09□□□□□ -0.47
SCNM1-202ENST00000368905 PRC1O43663 620 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 ATG7O95352 703 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 U2AF1L5P0DN76 240 aaPredicted RBP12.08□□□□□ -0.48
SCNM1-202ENST00000368905 U2AF1Q01081 240 aaKnown RBP eCLIP12.08□□□□□ -0.48
SCNM1-202ENST00000368905 PDE3AQ14432 1141 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 CCDC174Q6PII3 467 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 LSM14AQ8ND56 463 aaKnown RBP12.08□□□□□ -0.48
SCNM1-202ENST00000368905 DDX27Q96GQ7 796 aaKnown RBP12.08□□□□□ -0.48
SCNM1-202ENST00000368905 AGBL1Q96MI9 1066 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 SMC3Q9UQE7 1217 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 TNRQ92752 1358 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 ATP7BP35670 1465 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 S100BP04271 92 aaPredicted RBP12.08□□□□□ -0.48
SCNM1-202ENST00000368905 FLT3P36888 993 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 EPAS1Q99814 870 aa12.08□□□□□ -0.48
SCNM1-202ENST00000368905 IPO8O15397 1037 aaKnown RBP12.07□□□□□ -0.48
SCNM1-202ENST00000368905 DHX8Q14562 1220 aaKnown RBP12.07□□□□□ -0.48
SCNM1-202ENST00000368905 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
SCNM1-202ENST00000368905 PPP1R12AO14974 1030 aaPredicted RBP12.06□□□□□ -0.48
SCNM1-202ENST00000368905 TIMM44O43615 452 aa12.06□□□□□ -0.48
SCNM1-202ENST00000368905 GJC2Q5T442 439 aaPredicted RBP12.06□□□□□ -0.48
SCNM1-202ENST00000368905 PAIP2Q9BPZ3 127 aaKnown RBP12.06□□□□□ -0.48
SCNM1-202ENST00000368905 LRRC27Q9C0I9 530 aa12.06□□□□□ -0.48
SCNM1-202ENST00000368905 CWC25Q9NXE8 425 aaPredicted RBP12.06□□□□□ -0.48
SCNM1-202ENST00000368905 ANAPC4Q9UJX5 808 aa12.06□□□□□ -0.48
SCNM1-202ENST00000368905 ISY1Q9ULR0 285 aaKnown RBP12.06□□□□□ -0.48
SCNM1-202ENST00000368905 RPUSD2Q8IZ73 545 aaKnown RBP12.06□□□□□ -0.48
SCNM1-202ENST00000368905 SETD1AO15047 1707 aaKnown RBP12.05□□□□□ -0.48
SCNM1-202ENST00000368905 KIF20BQ96Q89 1820 aa12.05□□□□□ -0.48
SCNM1-202ENST00000368905 FYB1O15117 783 aa12.05□□□□□ -0.48
SCNM1-202ENST00000368905 MSH5O43196 834 aa12.05□□□□□ -0.48
SCNM1-202ENST00000368905 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
SCNM1-202ENST00000368905 ZSCAN30Q86W11 494 aa12.05□□□□□ -0.48
SCNM1-202ENST00000368905 MAPK8IP3Q9UPT6 1336 aa12.05□□□□□ -0.48
SCNM1-202ENST00000368905 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 PCDH12Q9NPG4 1184 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 FAM135BQ49AJ0 1406 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 CD163L1Q9NR16 1453 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 ADGRB2O60241 1585 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 KDM2BQ8NHM5 1336 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 CDC37Q16543 378 aaPredicted RBP12.04□□□□□ -0.48
SCNM1-202ENST00000368905 CC2D1AQ6P1N0 951 aaPredicted RBP12.04□□□□□ -0.48
SCNM1-202ENST00000368905 CABP1Q9NZU7 370 aa12.04□□□□□ -0.48
SCNM1-202ENST00000368905 SETD1BQ9UPS6 1966 aaKnown RBP12.04□□□□□ -0.48
SCNM1-202ENST00000368905 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 PDE4AP27815 886 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 L1TD1Q5T7N2 865 aaKnown RBP12.03□□□□□ -0.48
SCNM1-202ENST00000368905 RNF187Q5TA31 235 aaPredicted RBP12.03□□□□□ -0.48
SCNM1-202ENST00000368905 HSCBQ8IWL3 235 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 BANK1Q8NDB2 785 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 RNF217Q8TC41 542 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 TMC2Q8TDI7 906 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 ITFG2Q969R8 447 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
SCNM1-202ENST00000368905 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 DIAPH1O60610 1272 aaKnown RBP12.03□□□□□ -0.48
SCNM1-202ENST00000368905 HMMRO75330 724 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 MARSP56192 900 aaKnown RBP12.03□□□□□ -0.48
SCNM1-202ENST00000368905 BORCS6Q96GS4 357 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 SEZ6LQ9BYH1 1024 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 BACH2Q9BYV9 841 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 ZHX3Q9H4I2 956 aa12.03□□□□□ -0.48
SCNM1-202ENST00000368905 TECPR2O15040 1411 aa12.02□□□□□ -0.48
SCNM1-202ENST00000368905 ZNF142P52746 1687 aaPredicted RBP12.02□□□□□ -0.49
SCNM1-202ENST00000368905 TMEM88BA6NKF7 163 aa12.02□□□□□ -0.49
SCNM1-202ENST00000368905 WASLO00401 505 aaPredicted RBP12.02□□□□□ -0.49
SCNM1-202ENST00000368905 LDHCP07864 332 aa12.02□□□□□ -0.49
SCNM1-202ENST00000368905 KCTD2Q14681 263 aa12.02□□□□□ -0.49
SCNM1-202ENST00000368905 TBC1D2BQ9UPU7 963 aa12.02□□□□□ -0.49
SCNM1-202ENST00000368905 RRP7AQ9Y3A4 280 aaKnown RBP12.02□□□□□ -0.49
SCNM1-202ENST00000368905 CEP170BQ9Y4F5 1589 aaPredicted RBP12.02□□□□□ -0.49
SCNM1-202ENST00000368905 PNPLA6Q8IY17 1366 aa12.02□□□□□ -0.49
SCNM1-202ENST00000368905 IL16Q14005 1332 aa12.01□□□□□ -0.49
SCNM1-202ENST00000368905 BCAR3O75815 825 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms