RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 NOS1P29475 1434 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 IQCA1Q86XH1 822 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 ANKLE2Q86XL3 938 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 CTCFLQ8NI51 663 aaPredicted RBP9.57□□□□□ -0.88
SHPRH-203ENST00000367505 NAA15Q9BXJ9 866 aaKnown RBP9.57□□□□□ -0.88
SHPRH-203ENST00000367505 RAI14Q9P0K7 980 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 CCDC102BQ68D86 513 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 TRMT1Q9NXH9 659 aaKnown RBP9.57□□□□□ -0.88
SHPRH-203ENST00000367505 TFIP11Q9UBB9 837 aaKnown RBP9.57□□□□□ -0.88
SHPRH-203ENST00000367505 GOLGA8BA8MQT2 603 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 TSG101Q99816 390 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 FAM177BA6PVY3 158 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 RAPGEF3O95398 923 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 SSRP1Q08945 709 aaKnown RBP9.57□□□□□ -0.88
SHPRH-203ENST00000367505 KCNG4Q8TDN1 519 aa9.57□□□□□ -0.88
SHPRH-203ENST00000367505 CETN2P41208 172 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 PPP1R42Q7Z4L9 355 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.56□□□□□ -0.883e-9■■■■■ 73.7
SHPRH-203ENST00000367505 CCDC8Q9H0W5 538 aaPredicted RBP9.56□□□□□ -0.88
SHPRH-203ENST00000367505 TCOF1Q13428 1488 aaKnown RBP9.56□□□□□ -0.88
SHPRH-203ENST00000367505 ENOX2Q16206 610 aaKnown RBP9.56□□□□□ -0.88
SHPRH-203ENST00000367505 SLC26A8Q96RN1 970 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 PTPRKQ15262 1439 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 EZRP15311 586 aaKnown RBP9.56□□□□□ -0.88
SHPRH-203ENST00000367505 TTF1Q15361 905 aaPredicted RBP9.56□□□□□ -0.88
SHPRH-203ENST00000367505 KLHL10Q6JEL2 608 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 WAPLQ7Z5K2 1190 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 RHPN1Q8TCX5 695 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 SMARCC1Q92922 1105 aaPredicted RBP9.56□□□□□ -0.88
SHPRH-203ENST00000367505 BMP15O95972 392 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 CACNA2D4Q7Z3S7 1137 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 PRDM10Q9NQV6 1147 aa9.56□□□□□ -0.88
SHPRH-203ENST00000367505 HMGB2P26583 209 aaKnown RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 IFIT5Q13325 482 aaKnown RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 TAX1BP1Q86VP1 789 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 NUP88Q99567 741 aaPredicted RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 DCTPP1Q9H773 170 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 SSBP05455 408 aaKnown RBP eCLIP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 MYD88Q99836 296 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 DUOX2Q9NRD8 1548 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 GIMAP6Q6P9H5 292 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 PANK2Q9BZ23 570 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 ORC3Q9UBD5 711 aaPredicted RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 NPC1L1Q9UHC9 1359 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 LUZP1Q86V48 1076 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 FAM114A1Q8IWE2 563 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 ALS2CR12Q96Q35 445 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 PRDM11Q9NQV5 511 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 USP16Q9Y5T5 823 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 NPHP3Q7Z494 1330 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 GOLGA8AA7E2F4 631 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 TIGD1Q96MW7 591 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 F13A1P00488 732 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 GBP2P32456 591 aaPredicted RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 MRPL50Q8N5N7 158 aaKnown RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 DDX54Q8TDD1 881 aaKnown RBP9.55□□□□□ -0.88
SHPRH-203ENST00000367505 ARFGAP3Q9NP61 516 aa9.55□□□□□ -0.88
SHPRH-203ENST00000367505 GTPBP4Q9BZE4 634 aaKnown RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 SEC63Q9UGP8 760 aaKnown RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 CFAP43Q8NDM7 1665 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 TUBBP07437 444 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 ZFYP08048 801 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 SAMD1Q6SPF0 538 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 STK11IPQ8N1F8 1099 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 CTAGE1Q96RT6 745 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 ZBTB40Q9NUA8 1239 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 PODXL2Q9NZ53 605 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 RNF123Q5XPI4 1314 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 IFIT3O14879 490 aaKnown RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 POLR3GO15318 223 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 SKILP12757 684 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 AMPD3Q01432 767 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 GUCY1B3Q02153 619 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 SPAG1Q07617 926 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 SOS1Q07889 1333 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 ATP8B2P98198 1209 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 IDI1Q13907 227 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 GIMAP7Q8NHV1 300 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 NCOA7Q8NI08 942 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 CD109Q6YHK3 1445 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 A0A087WZG4 1122 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 PRIM1P49642 420 aaKnown RBP9.54□□□□□ -0.88
SHPRH-203ENST00000367505 STRN4Q9NRL3 753 aa9.54□□□□□ -0.88
SHPRH-203ENST00000367505 TERF1P54274 439 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 GNG11P61952 73 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 TTC41PQ6P2S7 1318 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 CCT2P78371 535 aaKnown RBP9.53□□□□□ -0.88
SHPRH-203ENST00000367505 ATP2B2Q01814 1243 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 TMEM266Q2M3C6 531 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 CAVIN4Q5BKX8 364 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 WWC2Q6AWC2 1192 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 ZNF652Q9Y2D9 606 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 ALDH1L1O75891 902 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 IVLP07476 585 aa9.53□□□□□ -0.88
SHPRH-203ENST00000367505 CKAP4Q07065 602 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms