RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PGPEP1Q9NXJ5 209 aa12.05□□□□□ -0.48
YBX3-204ENST00000366290 EMILIN1Q9Y6C2 1016 aa12.05□□□□□ -0.48
YBX3-204ENST00000366290 MBD5Q9P267 1494 aa12.04□□□□□ -0.48
YBX3-204ENST00000366290 ZBTB7CA1YPR0 619 aa12.04□□□□□ -0.48
YBX3-204ENST00000366290 BRD1O95696 1058 aa12.04□□□□□ -0.48
YBX3-204ENST00000366290 TIMP2P16035 220 aa12.04□□□□□ -0.48
YBX3-204ENST00000366290 SEC13P55735 322 aa12.04□□□□□ -0.48
YBX3-204ENST00000366290 ZNF775Q96BV0 537 aaPredicted RBP12.04□□□□□ -0.48
YBX3-204ENST00000366290 AGLP35573 1532 aa12.04□□□□□ -0.48
YBX3-204ENST00000366290 BMP1P13497 986 aa12.03□□□□□ -0.48
YBX3-204ENST00000366290 TRIM46Q7Z4K8 759 aa12.03□□□□□ -0.48
YBX3-204ENST00000366290 INO80Q9ULG1 1556 aaPredicted RBP12.03□□□□□ -0.48
YBX3-204ENST00000366290 SFI1A8K8P3 1242 aa12.02□□□□□ -0.49
YBX3-204ENST00000366290 CEBPAP49715 358 aaPredicted RBP12.02□□□□□ -0.49
YBX3-204ENST00000366290 SWI5Q1ZZU3 235 aa12.02□□□□□ -0.49
YBX3-204ENST00000366290 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.49
YBX3-204ENST00000366290 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
YBX3-204ENST00000366290 HNRNPMP52272 730 aaKnown RBP eCLIP12.01□□□□□ -0.49
YBX3-204ENST00000366290 WDR4P57081 412 aaKnown RBP12.01□□□□□ -0.49
YBX3-204ENST00000366290 TRIM47Q96LD4 638 aa12.01□□□□□ -0.49
YBX3-204ENST00000366290 ATP7AQ04656 1500 aa12.01□□□□□ -0.49
YBX3-204ENST00000366290 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
YBX3-204ENST00000366290 CYP2U1Q7Z449 544 aa12□□□□□ -0.49
YBX3-204ENST00000366290 CLP1Q92989 425 aaKnown RBP12□□□□□ -0.49
YBX3-204ENST00000366290 SLAIN2Q9P270 581 aa12□□□□□ -0.49
YBX3-204ENST00000366290 ZNF644Q9H582 1327 aaPredicted RBP12□□□□□ -0.49
YBX3-204ENST00000366290 RTEL1-TNFRSF6BF6WH68 1400 aa12□□□□□ -0.49
YBX3-204ENST00000366290 PLXNC1O60486 1568 aa12□□□□□ -0.49
YBX3-204ENST00000366290 SNRPBP14678 240 aaKnown RBP11.99□□□□□ -0.49
YBX3-204ENST00000366290 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.99□□□□□ -0.49
YBX3-204ENST00000366290 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
YBX3-204ENST00000366290 CAMSAP2Q08AD1 1489 aa11.99□□□□□ -0.49
YBX3-204ENST00000366290 ARHGEF5Q12774 1597 aa11.99□□□□□ -0.49
YBX3-204ENST00000366290 MIA2Q96PC5 1412 aa11.98□□□□□ -0.49
YBX3-204ENST00000366290 TMEM229AB2RXF0 380 aa11.98□□□□□ -0.49
YBX3-204ENST00000366290 STAU1O95793 577 aaKnown RBP11.98□□□□□ -0.49
YBX3-204ENST00000366290 B4GALNT3Q6L9W6 998 aa11.98□□□□□ -0.49
YBX3-204ENST00000366290 ITPKCQ96DU7 683 aa11.98□□□□□ -0.49
YBX3-204ENST00000366290 CCDC141Q6ZP82 1450 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 MYOM3Q5VTT5 1437 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 SCNN1DP51172 638 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 GDF10P55107 478 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 KCNA1Q09470 495 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 ZFAND3Q9H8U3 227 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 SENP2Q9HC62 589 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 ZNF358Q9NW07 568 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 STRCQ7RTU9 1775 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
YBX3-204ENST00000366290 PATL2C9JE40 543 aaKnown RBP11.96□□□□□ -0.49
YBX3-204ENST00000366290 M0R2N6 131 aa11.96□□□□□ -0.49
YBX3-204ENST00000366290 ZIC2O95409 532 aaPredicted RBP11.96□□□□□ -0.49
YBX3-204ENST00000366290 PODXL2Q9NZ53 605 aa11.96□□□□□ -0.49
YBX3-204ENST00000366290 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
YBX3-204ENST00000366290 GNRH1P01148 92 aa11.95□□□□□ -0.5
YBX3-204ENST00000366290 CBLBQ13191 982 aa11.95□□□□□ -0.5
YBX3-204ENST00000366290 TSEN2Q8NCE0 465 aaKnown RBP11.95□□□□□ -0.5
YBX3-204ENST00000366290 ETNK1Q9HBU6 452 aa11.95□□□□□ -0.5
YBX3-204ENST00000366290 A2MP01023 1474 aa11.95□□□□□ -0.5
YBX3-204ENST00000366290 PREX1Q8TCU6 1659 aa11.94□□□□□ -0.5
YBX3-204ENST00000366290 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
YBX3-204ENST00000366290 ADH1AP07327 375 aa11.94□□□□□ -0.5
YBX3-204ENST00000366290 ATP2B4P23634 1241 aa11.94□□□□□ -0.5
YBX3-204ENST00000366290 SSFA2P28290 1259 aa11.94□□□□□ -0.5
YBX3-204ENST00000366290 PHLDB3Q6NSJ2 640 aa11.94□□□□□ -0.5
YBX3-204ENST00000366290 KIFC2Q96AC6 838 aa11.94□□□□□ -0.5
YBX3-204ENST00000366290 HINFPQ9BQA5 517 aa11.94□□□□□ -0.5
YBX3-204ENST00000366290 LGR5O75473 907 aa11.93□□□□□ -0.5
YBX3-204ENST00000366290 INHAP05111 366 aa11.93□□□□□ -0.5
YBX3-204ENST00000366290 RAB6BQ9NRW1 208 aa11.93□□□□□ -0.5
YBX3-204ENST00000366290 MAST1Q9Y2H9 1570 aa11.92□□□□□ -0.5
YBX3-204ENST00000366290 PRMT3O60678 531 aa11.92□□□□□ -0.5
YBX3-204ENST00000366290 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
YBX3-204ENST00000366290 Q6ZVU0 165 aa11.92□□□□□ -0.5
YBX3-204ENST00000366290 ZFP42Q96MM3 310 aa11.92□□□□□ -0.5
YBX3-204ENST00000366290 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
YBX3-204ENST00000366290 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
YBX3-204ENST00000366290 BACH1O14867 736 aa11.91□□□□□ -0.5
YBX3-204ENST00000366290 ESCO1Q5FWF5 840 aa11.91□□□□□ -0.5
YBX3-204ENST00000366290 KDF1Q8NAX2 398 aaPredicted RBP11.91□□□□□ -0.5
YBX3-204ENST00000366290 PRIMPOLQ96LW4 560 aa11.91□□□□□ -0.5
YBX3-204ENST00000366290 SERTAD1Q9UHV2 236 aa11.91□□□□□ -0.5
YBX3-204ENST00000366290 DHX29Q7Z478 1369 aaKnown RBP11.91□□□□□ -0.5
YBX3-204ENST00000366290 MROH2AA6NES4 1674 aa11.91□□□□□ -0.5
YBX3-204ENST00000366290 C3P01024 1663 aa11.91□□□□□ -0.5
YBX3-204ENST00000366290 OCLNQ16625 522 aa11.9□□□□□ -0.5
YBX3-204ENST00000366290 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
YBX3-204ENST00000366290 FGD6Q6ZV73 1430 aa11.89□□□□□ -0.51
YBX3-204ENST00000366290 LCE2AQ5TA79 106 aaPredicted RBP11.89□□□□□ -0.51
YBX3-204ENST00000366290 TNS4Q8IZW8 715 aa11.89□□□□□ -0.51
YBX3-204ENST00000366290 MEIOBQ8N635 442 aa11.89□□□□□ -0.51
YBX3-204ENST00000366290 AGBL1Q96MI9 1066 aa11.89□□□□□ -0.51
YBX3-204ENST00000366290 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
YBX3-204ENST00000366290 PTPN23Q9H3S7 1636 aa11.89□□□□□ -0.51
YBX3-204ENST00000366290 SHANK2Q9UPX8 1470 aa11.89□□□□□ -0.51
YBX3-204ENST00000366290 FAM135AQ9P2D6 1515 aa11.88□□□□□ -0.51
YBX3-204ENST00000366290 IL2RAP01589 272 aa11.88□□□□□ -0.51
YBX3-204ENST00000366290 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
YBX3-204ENST00000366290 PURBQ96QR8 312 aaKnown RBP11.88□□□□□ -0.51
YBX3-204ENST00000366290 IVNS1ABPQ9Y6Y0 642 aa11.88□□□□□ -0.51
YBX3-204ENST00000366290 UHRF1BP1Q6BDS2 1440 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms