RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 RTL1A6NKG5 1358 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 STARD3NLO95772 234 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 SDSP20132 328 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 CWC27Q6UX04 472 aaKnown RBP11.07□□□□□ -0.64
CALD1-202ENST00000361901 PLEKHM2Q8IWE5 1019 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 GRM8O00222 908 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 KIF1BPQ96EK5 621 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 BOLA2Q9H3K6 86 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 DDB1Q16531 1140 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 BMP2KLQ5H9B9 411 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 TBC1D2BQ9UPU7 963 aa11.07□□□□□ -0.64
CALD1-202ENST00000361901 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
CALD1-202ENST00000361901 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
CALD1-202ENST00000361901 RHPN1Q8TCX5 695 aa11.06□□□□□ -0.64
CALD1-202ENST00000361901 FSD1Q9BTV5 496 aa11.06□□□□□ -0.64
CALD1-202ENST00000361901 ERC2O15083 957 aa11.06□□□□□ -0.64
CALD1-202ENST00000361901 ZFP91Q96JP5 570 aaPredicted RBP11.06□□□□□ -0.64
CALD1-202ENST00000361901 ST18O60284 1047 aa11.06□□□□□ -0.64
CALD1-202ENST00000361901 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
CALD1-202ENST00000361901 TTC22Q5TAA0 569 aa11.06□□□□□ -0.64
CALD1-202ENST00000361901 SHPRHQ149N8 1683 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 NEK4P51957 841 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 PDE1AP54750 535 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 RGPD8O14715 1765 aaPredicted RBP11.05□□□□□ -0.64
CALD1-202ENST00000361901 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 CNTROBQ8N137 903 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 USP32Q8NFA0 1604 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 DNAJC10Q8IXB1 793 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 BICC1Q9H694 974 aaKnown RBP11.05□□□□□ -0.64
CALD1-202ENST00000361901 ASAP1Q9ULH1 1129 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 KDRP35968 1356 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 CRB1P82279 1406 aa11.05□□□□□ -0.64
CALD1-202ENST00000361901 WDR17Q8IZU2 1322 aa11.04□□□□□ -0.64
CALD1-202ENST00000361901 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
CALD1-202ENST00000361901 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
CALD1-202ENST00000361901 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
CALD1-202ENST00000361901 CCDC57Q2TAC2 916 aa11.04□□□□□ -0.64
CALD1-202ENST00000361901 TTLL7Q6ZT98 887 aa11.04□□□□□ -0.64
CALD1-202ENST00000361901 TBC1D2Q9BYX2 928 aa11.04□□□□□ -0.64
CALD1-202ENST00000361901 BABAM1Q9NWV8 329 aa11.04□□□□□ -0.64
CALD1-202ENST00000361901 PTMSP20962 102 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 SSH2Q76I76 1423 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 TBC1D32Q96NH3 1257 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 UPF3BQ9BZI7 483 aaKnown RBP11.03□□□□□ -0.64
CALD1-202ENST00000361901 TAF3Q5VWG9 929 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
CALD1-202ENST00000361901 CNNM1Q9NRU3 951 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 IGSF3O75054 1194 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 KCNQ4P56696 695 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 SUCLG2Q96I99 432 aa11.03□□□□□ -0.64
CALD1-202ENST00000361901 TNS3Q68CZ2 1445 aa11.02□□□□□ -0.64
CALD1-202ENST00000361901 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.64
CALD1-202ENST00000361901 BEND3Q5T5X7 828 aa11.02□□□□□ -0.64
CALD1-202ENST00000361901 ERC1Q8IUD2 1116 aa11.02□□□□□ -0.64
CALD1-202ENST00000361901 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
CALD1-202ENST00000361901 TRMT112Q9UI30 125 aaKnown RBP11.02□□□□□ -0.65
CALD1-202ENST00000361901 PATL2C9JE40 543 aaKnown RBP11.02□□□□□ -0.65
CALD1-202ENST00000361901 FKBP4Q02790 459 aaKnown RBP eCLIP11.02□□□□□ -0.65
CALD1-202ENST00000361901 CWC25Q9NXE8 425 aaPredicted RBP11.02□□□□□ -0.65
CALD1-202ENST00000361901 HOXB7P09629 217 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 CSPP1Q1MSJ5 1256 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 RUFY2Q8WXA3 655 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 FAM89AQ96GI7 184 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 CARD10Q9BWT7 1032 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 RAB11FIP3O75154 756 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 ALDH1L1O75891 902 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 MCM4P33991 863 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
CALD1-202ENST00000361901 MST1RQ04912 1400 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 WASHC4Q2M389 1173 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 GBP4Q96PP9 640 aa11.01□□□□□ -0.65
CALD1-202ENST00000361901 GSPT1P15170 499 aaKnown RBP11□□□□□ -0.65
CALD1-202ENST00000361901 SNRKQ9NRH2 765 aa11□□□□□ -0.65
CALD1-202ENST00000361901 NDUFB9Q9Y6M9 179 aa11□□□□□ -0.65
CALD1-202ENST00000361901 LETM1O95202 739 aaPredicted RBP11□□□□□ -0.65
CALD1-202ENST00000361901 SOS1Q07889 1333 aaPredicted RBP11□□□□□ -0.65
CALD1-202ENST00000361901 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
CALD1-202ENST00000361901 KIF20AO95235 890 aa10.99□□□□□ -0.65
CALD1-202ENST00000361901 HSP90B1P14625 803 aaKnown RBP10.99□□□□□ -0.65
CALD1-202ENST00000361901 CHAF1AQ13111 956 aaPredicted RBP10.99□□□□□ -0.65
CALD1-202ENST00000361901 CERS3Q8IU89 383 aa10.99□□□□□ -0.65
CALD1-202ENST00000361901 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
CALD1-202ENST00000361901 METTL22Q9BUU2 404 aaPredicted RBP10.99□□□□□ -0.65
CALD1-202ENST00000361901 GLRX3O76003 335 aaKnown RBP10.99□□□□□ -0.65
CALD1-202ENST00000361901 GCKRQ14397 625 aa10.99□□□□□ -0.65
CALD1-202ENST00000361901 CCDC173Q0VFZ6 552 aa10.99□□□□□ -0.65
CALD1-202ENST00000361901 TOMM22Q9NS69 142 aa10.99□□□□□ -0.65
CALD1-202ENST00000361901 ECHDC1Q9NTX5 307 aa10.99□□□□□ -0.65
CALD1-202ENST00000361901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.99□□□□□ -0.652e-7■■■□□ 15.9
CALD1-202ENST00000361901 ZKSCAN1P17029 563 aaPredicted RBP10.98□□□□□ -0.65
CALD1-202ENST00000361901 CHMP5Q9NZZ3 219 aa10.98□□□□□ -0.65
CALD1-202ENST00000361901 NEURL1BA8MQ27 555 aa10.98□□□□□ -0.65
CALD1-202ENST00000361901 DMTNQ08495 405 aa10.98□□□□□ -0.65
CALD1-202ENST00000361901 PHF14O94880 888 aa10.98□□□□□ -0.65
CALD1-202ENST00000361901 PIGBQ92521 554 aa10.98□□□□□ -0.65
CALD1-202ENST00000361901 GTPBP4Q9BZE4 634 aaKnown RBP10.98□□□□□ -0.65
CALD1-202ENST00000361901 CCDC66A2RUB6 948 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms