RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 V9GY48 417 aaPredicted RBP8.03□□□□□ -1.12
RPL39-201ENST00000361575 TTC24A2A3L6 582 aaPredicted RBP8.02□□□□□ -1.13
RPL39-201ENST00000361575 LDHBP07195 334 aaKnown RBP8.02□□□□□ -1.13
RPL39-201ENST00000361575 MZF1P28698 734 aaPredicted RBP8.02□□□□□ -1.13
RPL39-201ENST00000361575 MAPK8P45983 427 aa8.02□□□□□ -1.13
RPL39-201ENST00000361575 PLCB3Q01970 1234 aa8.02□□□□□ -1.13
RPL39-201ENST00000361575 DNM1Q05193 864 aaKnown RBP8.02□□□□□ -1.13
RPL39-201ENST00000361575 TMEM214Q6NUQ4 689 aaKnown RBP8.02□□□□□ -1.13
RPL39-201ENST00000361575 INSM2Q96T92 566 aaPredicted RBP8.02□□□□□ -1.13
RPL39-201ENST00000361575 CFHR5Q9BXR6 569 aa8.02□□□□□ -1.13
RPL39-201ENST00000361575 BACH2Q9BYV9 841 aa8.02□□□□□ -1.13
RPL39-201ENST00000361575 NIF3L1Q9GZT8 377 aa8.02□□□□□ -1.13
RPL39-201ENST00000361575 PRPF40AO75400 957 aaKnown RBP8.01□□□□□ -1.13
RPL39-201ENST00000361575 GPC1P35052 558 aa8.01□□□□□ -1.13
RPL39-201ENST00000361575 PLA2G4AP47712 749 aa8.01□□□□□ -1.13
RPL39-201ENST00000361575 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
RPL39-201ENST00000361575 ENOX2Q16206 610 aaKnown RBP8.01□□□□□ -1.13
RPL39-201ENST00000361575 TSNAXIP1Q2TAA8 658 aa8.01□□□□□ -1.13
RPL39-201ENST00000361575 TREML1Q86YW5 311 aa8.01□□□□□ -1.13
RPL39-201ENST00000361575 DUSP9Q99956 384 aaKnown RBP8.01□□□□□ -1.13
RPL39-201ENST00000361575 PARP2Q9UGN5 583 aa8.01□□□□□ -1.13
RPL39-201ENST00000361575 SPINT1O43278 529 aa8□□□□□ -1.13
RPL39-201ENST00000361575 CTSOP43234 321 aaPredicted RBP8□□□□□ -1.13
RPL39-201ENST00000361575 PDE3BQ13370 1112 aa8□□□□□ -1.13
RPL39-201ENST00000361575 CYP4X1Q8N118 509 aa8□□□□□ -1.13
RPL39-201ENST00000361575 GGNBP2Q9H3C7 697 aa8□□□□□ -1.13
RPL39-201ENST00000361575 DMGDHQ9UI17 866 aaKnown RBP8□□□□□ -1.13
RPL39-201ENST00000361575 ZNF280CQ8ND82 737 aa7.99□□□□□ -1.13
RPL39-201ENST00000361575 GPR152Q8TDT2 470 aa7.99□□□□□ -1.13
RPL39-201ENST00000361575 PNMA6FA0A0J9YX94 578 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 A6NHS1 94 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 SPATA31C2B4DYI2 1134 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 OPLAHO14841 1288 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 ATP4AP20648 1035 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 DAB2P98082 770 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 ORC1Q13415 861 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 TMC4Q7Z404 712 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 NUDT16Q96DE0 195 aaKnown RBP7.98□□□□□ -1.13
RPL39-201ENST00000361575 PLA2G2EQ9NZK7 142 aa7.98□□□□□ -1.13
RPL39-201ENST00000361575 PRR20EP86478 221 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 PRR20CP86479 221 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 PRR20DP86480 221 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 PRR20BP86481 221 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 PRR20AP86496 221 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 HDLBPQ00341 1268 aaKnown RBP7.97□□□□□ -1.13
RPL39-201ENST00000361575 GNASQ5JWF2 1037 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 SLC27A3Q5K4L6 730 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 LINC00528Q8N1L1 170 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 HSH2DQ96JZ2 352 aa7.97□□□□□ -1.13
RPL39-201ENST00000361575 TSEN34Q9BSV6 310 aaKnown RBP7.97□□□□□ -1.13
RPL39-201ENST00000361575 TGFBR3LH3BV60 316 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 MICAL2O94851 1124 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 USP5P45974 858 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 PHKA2P46019 1235 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 RNF217Q8TC41 542 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 RHPN1Q8TCX5 695 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 SUSD3Q96L08 255 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 ZDHHC3Q9NYG2 299 aa7.96□□□□□ -1.14
RPL39-201ENST00000361575 GRNP28799 593 aaKnown RBP7.95□□□□□ -1.14
RPL39-201ENST00000361575 C8orf37Q96NL8 207 aa7.95□□□□□ -1.14
RPL39-201ENST00000361575 CSRNP1Q96S65 589 aa7.95□□□□□ -1.14
RPL39-201ENST00000361575 USP20Q9Y2K6 914 aa7.95□□□□□ -1.14
RPL39-201ENST00000361575 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
RPL39-201ENST00000361575 RAD51AP2Q09MP3 1159 aa7.94□□□□□ -1.14
RPL39-201ENST00000361575 POU4F2Q12837 409 aa7.94□□□□□ -1.14
RPL39-201ENST00000361575 TRIP4Q15650 581 aaPredicted RBP7.94□□□□□ -1.14
RPL39-201ENST00000361575 IER5Q5VY09 327 aa7.94□□□□□ -1.14
RPL39-201ENST00000361575 C9orf131Q5VYM1 1079 aa7.94□□□□□ -1.14
RPL39-201ENST00000361575 NBPF10Q6P3W6 841 aaKnown RBP7.94□□□□□ -1.14
RPL39-201ENST00000361575 METTL16Q86W50 562 aaKnown RBP7.94□□□□□ -1.14
RPL39-201ENST00000361575 AIDAQ96BJ3 306 aa7.94□□□□□ -1.14
RPL39-201ENST00000361575 POLMQ9NP87 494 aaPredicted RBP7.94□□□□□ -1.14
RPL39-201ENST00000361575 USP35Q9P2H5 1018 aa7.94□□□□□ -1.14
RPL39-201ENST00000361575 EIF1AYO14602 144 aaKnown RBP7.93□□□□□ -1.14
RPL39-201ENST00000361575 SCAMP3O14828 347 aaKnown RBP7.93□□□□□ -1.14
RPL39-201ENST00000361575 CAPN5O15484 640 aaPredicted RBP7.93□□□□□ -1.14
RPL39-201ENST00000361575 IDH3AP50213 366 aa7.93□□□□□ -1.14
RPL39-201ENST00000361575 XPCQ01831 940 aaPredicted RBP7.93□□□□□ -1.14
RPL39-201ENST00000361575 NBPF1Q3BBV0 1214 aa7.93□□□□□ -1.14
RPL39-201ENST00000361575 SORBS3O60504 671 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 CTSHP09668 335 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 INPP5BP32019 993 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 ATP2B2Q01814 1243 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 PSMD2Q13200 908 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 C8orf34Q49A92 452 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 ALG1LQ6GMV1 187 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 PRICKLE2Q7Z3G6 844 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 ZIC5Q96T25 663 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 GPC6Q9Y625 555 aaPredicted RBP7.92□□□□□ -1.14
RPL39-201ENST00000361575 KCNMB2Q9Y691 235 aa7.92□□□□□ -1.14
RPL39-201ENST00000361575 GNA15P30679 374 aa7.91□□□□□ -1.14
RPL39-201ENST00000361575 FGD1P98174 961 aa7.91□□□□□ -1.14
RPL39-201ENST00000361575 FANCCQ00597 558 aa7.91□□□□□ -1.14
RPL39-201ENST00000361575 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
RPL39-201ENST00000361575 FOXD3Q9UJU5 478 aaPredicted RBP7.91□□□□□ -1.14
RPL39-201ENST00000361575 ZC3H6P61129 1189 aaKnown RBP7.9□□□□□ -1.14
RPL39-201ENST00000361575 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
RPL39-201ENST00000361575 BTLAQ7Z6A9 289 aa7.9□□□□□ -1.14
RPL39-201ENST00000361575 TMEM87AQ8NBN3 555 aa7.9□□□□□ -1.14
RPL39-201ENST00000361575 FBF1Q8TES7 1133 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms