RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 BICDL1Q6ZP65 573 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 SSH3Q8TE77 659 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 BICC1Q9H694 974 aaKnown RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 MS4A1P11836 297 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 LINC00116Q8NCU8 138 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 ATP6V1AP38606 617 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 BARGINQ6ZT62 677 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 METTL22Q9BUU2 404 aaPredicted RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 CCDC8Q9H0W5 538 aaPredicted RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 C9orf78Q9NZ63 289 aaPredicted RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 ALS2Q96Q42 1657 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 CRKLP46109 303 aaKnown RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 RFX5P48382 616 aaPredicted RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 EAF2Q96CJ1 260 aaPredicted RBP3.58□□□□□ -1.84
LTN1-201ENST00000361371 H7C1W4 665 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 GNAI3P08754 354 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 LRRC24Q50LG9 513 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 HYPKQ9NX55 129 aa3.58□□□□□ -1.84
LTN1-201ENST00000361371 GRM8O00222 908 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 HCLS1P14317 486 aaPredicted RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 BCL2L12Q9HB09 334 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 ROBO1Q9Y6N7 1651 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 UBN2Q6ZU65 1347 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 TRIM37O94972 964 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 PTPN12Q05209 780 aaKnown RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 RHPN1Q8TCX5 695 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 POLA2Q14181 598 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 HELBQ8NG08 1087 aaPredicted RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 PLBD2Q8NHP8 589 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 SALL3Q9BXA9 1300 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 ALDH1L1O75891 902 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 TCIRG1Q13488 830 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 SUSD4Q5VX71 490 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 PDGFDQ9GZP0 370 aaPredicted RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 PALLDQ8WX93 1383 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 MFAP1P55081 439 aaKnown RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 TIMM10P62072 90 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 FAM161AQ3B820 660 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 ITSN1Q15811 1721 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 XIRP1Q702N8 1843 aaKnown RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 KIF20BQ96Q89 1820 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 PHF14O94880 888 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 USPL1Q5W0Q7 1092 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 PI16Q6UXB8 463 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 GIGYF2Q6Y7W6 1299 aaKnown RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 ISCA1Q9BUE6 129 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 ONECUT3O60422 494 aaPredicted RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 PDE1AP54750 535 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 DZIP3Q86Y13 1208 aaKnown RBP3.57□□□□□ -1.84
LTN1-201ENST00000361371 SEC31BQ9NQW1 1179 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 CCDC87Q9NVE4 849 aa3.57□□□□□ -1.84
LTN1-201ENST00000361371 SPATA31A6Q5VVP1 1343 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 AHDC1Q5TGY3 1603 aaPredicted RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 SDSP20132 328 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 FOXO4P98177 505 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 COL18A1P39060 1754 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 TNS2Q63HR2 1409 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 COL16A1Q07092 1604 aaPredicted RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 FAM208AQ9UK61 1670 aaKnown RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 GCC1Q96CN9 775 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 DBNDD2Q9BQY9 259 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 CHMP3Q9Y3E7 222 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 LMO7Q8WWI1 1683 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 MAP2P11137 1827 aaKnown RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 CAMTA2O94983 1202 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 MTX1Q13505 466 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 TRPC5Q9UL62 973 aaPredicted RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 ANKRD26Q9UPS8 1709 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 FAM196AQ6ZSG2 479 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 THRAP3Q9Y2W1 955 aaKnown RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 CD2BP2O95400 341 aaKnown RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 DDX58O95786 925 aaKnown RBP3.56□□□□□ -1.84
LTN1-201ENST00000361371 TFCP2Q12800 502 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 ATG9AQ7Z3C6 839 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 TAF6LQ9Y6J9 622 aa3.56□□□□□ -1.84
LTN1-201ENST00000361371 KIF1AQ12756 1690 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 TBC1D9Q6ZT07 1266 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 DEFB132Q7Z7B7 95 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 NLRP10Q86W26 655 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 VSIG10Q8N0Z9 540 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 GREM2Q9H772 168 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 SNRKQ9NRH2 765 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 CCNL1Q9UK58 526 aaPredicted RBP3.55□□□□□ -1.84
LTN1-201ENST00000361371 STARD3NLO95772 234 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 ANTXR1Q9H6X2 564 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 TRMT112Q9UI30 125 aaKnown RBP3.55□□□□□ -1.84
LTN1-201ENST00000361371 EP400Q96L91 3159 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 MAP3K15Q6ZN16 1313 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 GNPATO15228 680 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 NEXNQ0ZGT2 675 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 TTLL11Q8NHH1 800 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 ARHGEF1Q92888 912 aaKnown RBP3.55□□□□□ -1.84
LTN1-201ENST00000361371 CDCA7Q9BWT1 371 aaPredicted RBP3.55□□□□□ -1.84
LTN1-201ENST00000361371 SCARF1Q14162 830 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 ZNF827Q17R98 1081 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 TTC22Q5TAA0 569 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 SPRYD3Q8NCJ5 442 aa3.55□□□□□ -1.84
LTN1-201ENST00000361371 DBNLQ9UJU6 430 aaKnown RBP3.55□□□□□ -1.84
LTN1-201ENST00000361371 NOP58Q9Y2X3 529 aaKnown RBP3.55□□□□□ -1.84
LTN1-201ENST00000361371 IBTKQ9P2D0 1353 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms