RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.19
SMC5-201ENST00000361138 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
SMC5-201ENST00000361138 TMX4Q9H1E5 349 aaPredicted RBP16.2■□□□□ 0.18
SMC5-201ENST00000361138 GOLGA6L7A0A1B0GV03 622 aa16.2■□□□□ 0.18
SMC5-201ENST00000361138 TUBB4AP04350 444 aa16.2■□□□□ 0.18
SMC5-201ENST00000361138 NUP133Q8WUM0 1156 aa16.2■□□□□ 0.18
SMC5-201ENST00000361138 C14orf93Q9H972 538 aaKnown RBP16.2■□□□□ 0.18
SMC5-201ENST00000361138 ECHDC1Q9NTX5 307 aa16.2■□□□□ 0.18
SMC5-201ENST00000361138 NLRP2Q9NX02 1062 aa16.2■□□□□ 0.18
SMC5-201ENST00000361138 ZNF500O60304 480 aaPredicted RBP16.2■□□□□ 0.18
SMC5-201ENST00000361138 SPATA31E1Q6ZUB1 1445 aa16.19■□□□□ 0.18
SMC5-201ENST00000361138 RIOK3O14730 519 aaKnown RBP16.19■□□□□ 0.18
SMC5-201ENST00000361138 CCDC8Q9H0W5 538 aaPredicted RBP16.19■□□□□ 0.18
SMC5-201ENST00000361138 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
SMC5-201ENST00000361138 GNG11P61952 73 aa16.19■□□□□ 0.18
SMC5-201ENST00000361138 CNNM3Q8NE01 707 aa16.19■□□□□ 0.18
SMC5-201ENST00000361138 IVLP07476 585 aa16.19■□□□□ 0.18
SMC5-201ENST00000361138 CCT2P78371 535 aaKnown RBP16.19■□□□□ 0.18
SMC5-201ENST00000361138 GPATCH11Q8N954 259 aa16.19■□□□□ 0.18
SMC5-201ENST00000361138 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
SMC5-201ENST00000361138 RAI14Q9P0K7 980 aa16.19■□□□□ 0.18
SMC5-201ENST00000361138 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
SMC5-201ENST00000361138 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 G3V3G9 751 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 GTF2A1P52655 376 aaPredicted RBP16.18■□□□□ 0.18
SMC5-201ENST00000361138 EVA1CP58658 441 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 DCAF8Q5TAQ9 597 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 SRRTQ9BXP5 876 aaKnown RBP16.18■□□□□ 0.18
SMC5-201ENST00000361138 DNAI1Q9UI46 699 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 RAD21O60216 631 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 U2AF2P26368 475 aaKnown RBP eCLIP16.18■□□□□ 0.189e-8■■■■□ 23
SMC5-201ENST00000361138 CT47A1Q5JQC4 288 aaPredicted RBP16.18■□□□□ 0.18
SMC5-201ENST00000361138 CCDC12Q8WUD4 166 aaPredicted RBP16.18■□□□□ 0.18
SMC5-201ENST00000361138 DNAAF4Q8WXU2 420 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 SMARCC1Q92922 1105 aaPredicted RBP16.18■□□□□ 0.18
SMC5-201ENST00000361138 CEP85Q6P2H3 762 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 CNNM1Q9NRU3 951 aa16.18■□□□□ 0.18
SMC5-201ENST00000361138 ZFP91Q96JP5 570 aaPredicted RBP16.17■□□□□ 0.18
SMC5-201ENST00000361138 ARFGAP3Q9NP61 516 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 DUOX2Q9NRD8 1548 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 CTR9Q6PD62 1173 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 MICALCLQ6ZW33 695 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 NEK1Q96PY6 1258 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 TANGO6Q9C0B7 1094 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 AOPEPQ8N6M6 819 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 KIF6Q6ZMV9 814 aa16.17■□□□□ 0.18
SMC5-201ENST00000361138 ZBTB7BO15156 539 aaPredicted RBP16.16■□□□□ 0.18
SMC5-201ENST00000361138 AK2P54819 239 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 C8orf58Q8NAV2 365 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 CPLX3Q8WVH0 158 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 KLHL10Q6JEL2 608 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 MTMR7Q9Y216 660 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
SMC5-201ENST00000361138 PLCD4Q9BRC7 762 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 WDR62O43379 1518 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 LUZP1Q86V48 1076 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 NUP88Q99567 741 aaPredicted RBP16.16■□□□□ 0.18
SMC5-201ENST00000361138 CCDC61Q9Y6R9 512 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.16■□□□□ 0.18
SMC5-201ENST00000361138 RHPN1Q8TCX5 695 aa16.16■□□□□ 0.18
SMC5-201ENST00000361138 RBM33Q96EV2 1170 aaKnown RBP16.16■□□□□ 0.18
SMC5-201ENST00000361138 SPA17Q15506 151 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 CARD14Q9BXL6 1004 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 NPC1L1Q9UHC9 1359 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 UBASH3AP57075 661 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 C17orf53Q8N3J3 647 aaPredicted RBP16.15■□□□□ 0.18
SMC5-201ENST00000361138 GABPB1Q06547 395 aaPredicted RBP16.15■□□□□ 0.18
SMC5-201ENST00000361138 WAPLQ7Z5K2 1190 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 NUP153P49790 1475 aaKnown RBP16.15■□□□□ 0.18
SMC5-201ENST00000361138 VAMP4O75379 141 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 ISM2Q6H9L7 571 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 CCDC57Q2TAC2 916 aa16.15■□□□□ 0.18
SMC5-201ENST00000361138 PIK3R4Q99570 1358 aa16.14■□□□□ 0.17
SMC5-201ENST00000361138 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
SMC5-201ENST00000361138 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
SMC5-201ENST00000361138 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
SMC5-201ENST00000361138 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.17
SMC5-201ENST00000361138 YEATS4O95619 227 aa16.14■□□□□ 0.17
SMC5-201ENST00000361138 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
SMC5-201ENST00000361138 ERO1AQ96HE7 468 aa16.14■□□□□ 0.17
SMC5-201ENST00000361138 GOLGA8BA8MQT2 603 aa16.13■□□□□ 0.17
SMC5-201ENST00000361138 SYT1P21579 422 aa16.13■□□□□ 0.17
SMC5-201ENST00000361138 ADGRL1O94910 1474 aa16.13■□□□□ 0.17
SMC5-201ENST00000361138 POGZQ7Z3K3 1410 aa16.13■□□□□ 0.17
SMC5-201ENST00000361138 CHMLP26374 656 aa16.13■□□□□ 0.17
SMC5-201ENST00000361138 RNF187Q5TA31 235 aaPredicted RBP16.13■□□□□ 0.17
SMC5-201ENST00000361138 TAF4BQ92750 862 aa16.13■□□□□ 0.17
SMC5-201ENST00000361138 RBM8AQ9Y5S9 174 aaKnown RBP16.13■□□□□ 0.17
SMC5-201ENST00000361138 POLR3DP05423 398 aaPredicted RBP16.12■□□□□ 0.17
SMC5-201ENST00000361138 GAS2L3Q86XJ1 694 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 SYT10Q6XYQ8 523 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 GOLGA1Q92805 767 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 UBAC1Q9BSL1 405 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 CEP126Q9P2H0 1117 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 DHX37Q8IY37 1157 aaKnown RBP16.12■□□□□ 0.17
SMC5-201ENST00000361138 TSPYL6Q8N831 410 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 KDM5CP41229 1560 aa16.12■□□□□ 0.17
SMC5-201ENST00000361138 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms