RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
TRAPPC2-201ENST00000359680 OVOS2A0A0J9YW53 1432 aa11.83□□□□□ -0.52
TRAPPC2-201ENST00000359680 OVOS2Q6IE36 1432 aa11.83□□□□□ -0.52
TRAPPC2-201ENST00000359680 PXDNLA1KZ92 1463 aa11.83□□□□□ -0.52
TRAPPC2-201ENST00000359680 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 TYRO3Q06418 890 aa11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 GOLGA6L4A6NEF3 574 aa11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 SRGAP3O43295 1099 aa11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 CAMK4Q16566 473 aa11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 CCDC186Q7Z3E2 898 aa11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 LUZP1Q86V48 1076 aa11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 TNMDQ9H2S6 317 aa11.82□□□□□ -0.52
TRAPPC2-201ENST00000359680 SMTNL1A8MU46 457 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 DTNBO60941 627 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 LARP1BQ659C4 914 aaKnown RBP11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 C16orf45Q96MC5 204 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 MRVI1Q9Y6F6 885 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 ACEP12821 1306 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 PDIA4P13667 645 aaKnown RBP11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 POLA2Q14181 598 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 SYCP1Q15431 976 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 TTC6Q86TZ1 520 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 TRIM5Q9C035 493 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 OGFRQ9NZT2 677 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 MAP3K5Q99683 1374 aa11.81□□□□□ -0.52
TRAPPC2-201ENST00000359680 GLRX3O76003 335 aaKnown RBP11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 NCBP1Q09161 790 aaKnown RBP11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 OS9Q13438 667 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 SIRT1Q96EB6 747 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 TM6SF1Q9BZW5 370 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 NRXN3Q9Y4C0 1643 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 ELP1O95163 1332 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 HTATSF1O43719 755 aaKnown RBP11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 TNNT1P13805 278 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 ZKSCAN1P17029 563 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 LIG1P18858 919 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 PDCP20941 246 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 ADCK5Q3MIX3 580 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 ANO6Q4KMQ2 910 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 CKAP2LQ8IYA6 745 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 NALCNQ8IZF0 1738 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 TTC41PQ6P2S7 1318 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 LRMPQ12912 555 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 ME3Q16798 604 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 FERMT3Q86UX7 667 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 NECAB1Q8N987 351 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 CBX8Q9HC52 389 aa11.8□□□□□ -0.52
TRAPPC2-201ENST00000359680 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 KCNJ4P48050 445 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 PTH1RQ03431 593 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 HDGFL1Q5TGJ6 251 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 SCAND2PQ9GZW5 306 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 CGNQ9P2M7 1197 aaKnown RBP11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 PAXBP1Q9Y5B6 917 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 FLT4P35916 1363 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 KDRP35968 1356 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 ZNF771Q7L3S4 317 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 DDX19AQ9NUU7 478 aaKnown RBP11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 DACT1Q9NYF0 836 aa11.79□□□□□ -0.52
TRAPPC2-201ENST00000359680 CCDC171Q6TFL3 1326 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 AMPHP49418 695 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 ZNF75DP51815 510 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 TPD52L1Q16890 204 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 CDC37L1Q7L3B6 337 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 TECPR2O15040 1411 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 USP6P35125 1406 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 IGSF3O75054 1194 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 SPATA32Q96LK8 384 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 EYA1Q99502 592 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 PHAXQ9H814 394 aaKnown RBP11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 NRBP1Q9UHY1 535 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
TRAPPC2-201ENST00000359680 NPHP3Q7Z494 1330 aa11.77□□□□□ -0.52
TRAPPC2-201ENST00000359680 LRRC37A3O60309 1634 aa11.77□□□□□ -0.52
TRAPPC2-201ENST00000359680 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.52
TRAPPC2-201ENST00000359680 CLASRPQ8N2M8 674 aaKnown RBP11.77□□□□□ -0.52
TRAPPC2-201ENST00000359680 CRYBG1Q9Y4K1 1723 aa11.77□□□□□ -0.52
TRAPPC2-201ENST00000359680 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
TRAPPC2-201ENST00000359680 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
TRAPPC2-201ENST00000359680 A0A0U1RQG5 324 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC2-201ENST00000359680 PLA2G4DQ86XP0 818 aa11.77□□□□□ -0.53
TRAPPC2-201ENST00000359680 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
TRAPPC2-201ENST00000359680 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
TRAPPC2-201ENST00000359680 TPCN1Q9ULQ1 816 aa11.77□□□□□ -0.53
TRAPPC2-201ENST00000359680 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
TRAPPC2-201ENST00000359680 CEP170BQ9Y4F5 1589 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC2-201ENST00000359680 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms