RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 FMNL2Q96PY5 1086 aa14.52□□□□□ -0.08
COL20A1-201ENST00000358894 CNPY2Q9Y2B0 182 aa14.52□□□□□ -0.08
COL20A1-201ENST00000358894 NUP62CLQ9H1M0 184 aa14.52□□□□□ -0.08
COL20A1-201ENST00000358894 CEP126Q9P2H0 1117 aa14.52□□□□□ -0.08
COL20A1-201ENST00000358894 CCDC57Q2TAC2 916 aa14.52□□□□□ -0.09
COL20A1-201ENST00000358894 CCDC183Q5T5S1 534 aa14.52□□□□□ -0.09
COL20A1-201ENST00000358894 NBPF6Q5VWK0 638 aa14.52□□□□□ -0.09
COL20A1-201ENST00000358894 NBPF4Q96M43 638 aa14.52□□□□□ -0.09
COL20A1-201ENST00000358894 SH2B1Q9NRF2 756 aaPredicted RBP14.52□□□□□ -0.09
COL20A1-201ENST00000358894 KINO60870 393 aaKnown RBP14.52□□□□□ -0.09
COL20A1-201ENST00000358894 USP48Q86UV5 1035 aa14.52□□□□□ -0.09
COL20A1-201ENST00000358894 IP6K1Q92551 441 aa14.52□□□□□ -0.09
COL20A1-201ENST00000358894 USP44Q9H0E7 712 aa14.52□□□□□ -0.09
COL20A1-201ENST00000358894 AK2P54819 239 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 TRIM29Q14134 588 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 CCDC158Q5M9N0 1113 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 TTC39AQ5SRH9 613 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 ZBTB3Q9H5J0 574 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 SETBP1Q9Y6X0 1596 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 KCNQ3O43525 872 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
COL20A1-201ENST00000358894 LRSAM1Q6UWE0 723 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 ME1P48163 572 aa14.51□□□□□ -0.09
COL20A1-201ENST00000358894 RBM8AQ9Y5S9 174 aaKnown RBP14.51□□□□□ -0.09
COL20A1-201ENST00000358894 KRT32Q14532 448 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 CKAP2LQ8IYA6 745 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 CABLES1Q8TDN4 633 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 PALD1Q9ULE6 856 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 ANKRD13DQ6ZTN6 518 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 SIRT1Q96EB6 747 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 ORAI2Q96SN7 254 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 TSPOAP1O95153 1857 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 DDX46Q7L014 1031 aaKnown RBP14.5□□□□□ -0.09
COL20A1-201ENST00000358894 GAS2L3Q86XJ1 694 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 CNNM1Q9NRU3 951 aa14.5□□□□□ -0.09
COL20A1-201ENST00000358894 ZSCAN22P10073 491 aaPredicted RBP14.49□□□□□ -0.09
COL20A1-201ENST00000358894 NFATC2IPQ8NCF5 419 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 GUCY1B3Q02153 619 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 STK11IPQ8N1F8 1099 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 LINS1Q8NG48 757 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 KLHDC4Q8TBB5 520 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 KIF6Q6ZMV9 814 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 LRRC2Q9BYS8 371 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 LMTK2Q8IWU2 1503 aa14.49□□□□□ -0.09
COL20A1-201ENST00000358894 ALDH1L1O75891 902 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 ATP2B1P20020 1258 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 MAP3K11Q16584 847 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 PNPLA6Q8IY17 1366 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 IFNL2Q8IZJ0 200 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 STK38Q15208 465 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 ARHGEF10O15013 1369 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 GOLIM4O00461 696 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 AKAP17AQ02040 695 aaKnown RBP14.48□□□□□ -0.09
COL20A1-201ENST00000358894 SNRKQ9NRH2 765 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 KIDINS220Q9ULH0 1771 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 RNMTO43148 476 aaKnown RBP14.48□□□□□ -0.09
COL20A1-201ENST00000358894 RBSNQ9H1K0 784 aa14.48□□□□□ -0.09
COL20A1-201ENST00000358894 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
COL20A1-201ENST00000358894 DNM1Q05193 864 aaKnown RBP14.47□□□□□ -0.09
COL20A1-201ENST00000358894 NMIQ13287 307 aaPredicted RBP14.47□□□□□ -0.09
COL20A1-201ENST00000358894 LRRC7Q96NW7 1537 aa14.47□□□□□ -0.09
COL20A1-201ENST00000358894 IFIT1P09914 478 aaKnown RBP14.47□□□□□ -0.09
COL20A1-201ENST00000358894 CCT2P78371 535 aaKnown RBP14.47□□□□□ -0.09
COL20A1-201ENST00000358894 RRP12Q5JTH9 1297 aaKnown RBP14.47□□□□□ -0.09
COL20A1-201ENST00000358894 RASSF8Q8NHQ8 419 aa14.47□□□□□ -0.09
COL20A1-201ENST00000358894 CDK12Q9NYV4 1490 aaPredicted RBP14.47□□□□□ -0.09
COL20A1-201ENST00000358894 UNC5CLQ8IV45 518 aa14.47□□□□□ -0.09
COL20A1-201ENST00000358894 BICC1Q9H694 974 aaKnown RBP14.47□□□□□ -0.09
COL20A1-201ENST00000358894 LMBRD1Q9NUN5 540 aa14.47□□□□□ -0.09
COL20A1-201ENST00000358894 ALKQ9UM73 1620 aa14.47□□□□□ -0.09
COL20A1-201ENST00000358894 KAT6BQ8WYB5 2073 aa14.46□□□□□ -0.09
COL20A1-201ENST00000358894 A2ML1A8K2U0 1454 aa14.46□□□□□ -0.09
COL20A1-201ENST00000358894 TULP1O00294 542 aaPredicted RBP14.46□□□□□ -0.09
COL20A1-201ENST00000358894 PTCH1Q13635 1447 aa14.46□□□□□ -0.09
COL20A1-201ENST00000358894 EIF4A1P60842 406 aaKnown RBP14.46□□□□□ -0.09
COL20A1-201ENST00000358894 UBE2HP62256 183 aa14.46□□□□□ -0.09
COL20A1-201ENST00000358894 ZNF830Q96NB3 372 aaPredicted RBP14.46□□□□□ -0.09
COL20A1-201ENST00000358894 SNRPA1P09661 255 aaKnown RBP14.46□□□□□ -0.1
COL20A1-201ENST00000358894 CCDC34Q96HJ3 373 aa14.46□□□□□ -0.1
COL20A1-201ENST00000358894 USP6P35125 1406 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 INTS4Q96HW7 963 aaKnown RBP14.45□□□□□ -0.1
COL20A1-201ENST00000358894 SYT1P21579 422 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 CCAR2Q8N163 923 aaKnown RBP14.45□□□□□ -0.1
COL20A1-201ENST00000358894 ZNF396Q96N95 335 aaPredicted RBP14.45□□□□□ -0.1
COL20A1-201ENST00000358894 TBC1D2BQ9UPU7 963 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 IQSEC2Q5JU85 1478 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 SGSM2O43147 1006 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 ADCY5O95622 1261 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 VPS37DQ86XT2 251 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 SCAND2PQ9GZW5 306 aaPredicted RBP14.45□□□□□ -0.1
COL20A1-201ENST00000358894 CFAP45Q9UL16 551 aa14.45□□□□□ -0.1
COL20A1-201ENST00000358894 IDH1O75874 414 aaKnown RBP14.44□□□□□ -0.1
COL20A1-201ENST00000358894 LMBR1LQ6UX01 489 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 TTC41PQ6P2S7 1318 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 F13A1P00488 732 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 BRF1Q92994 677 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 SNX14Q9Y5W7 946 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 ADGRB1O14514 1584 aa14.44□□□□□ -0.1
COL20A1-201ENST00000358894 IGSF3O75054 1194 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms