RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 NCBP3Q53F19 620 aaKnown RBP6.99□□□□□ -1.29
VPS13B-203ENST00000358544 EVCP57679 992 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 NAIPQ13075 1403 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 MYH11P35749 1972 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 CARMIL2Q6F5E8 1435 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 GCOM1H8Y6P7 765 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-203ENST00000358544 SRGAP3O43295 1099 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 F13A1P00488 732 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 MYZAPP0CAP1 466 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 BCCIPQ9P287 314 aaKnown RBP eCLIP6.99□□□□□ -1.293e-8■■■■■ 27.3
VPS13B-203ENST00000358544 PRRC2BQ5JSZ5 2229 aaKnown RBP6.99□□□□□ -1.29
VPS13B-203ENST00000358544 BUB1BO60566 1050 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-203ENST00000358544 USO1O60763 962 aaKnown RBP6.99□□□□□ -1.29
VPS13B-203ENST00000358544 CABP2Q9NPB3 220 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 KIF5BP33176 963 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 AP1ARQ63HQ0 302 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 TRIM22Q8IYM9 498 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 LMBRD1Q9NUN5 540 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 SWAP70Q9UH65 585 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 RRP15Q9Y3B9 282 aaKnown RBP6.99□□□□□ -1.29
VPS13B-203ENST00000358544 ARHGAP25P42331 645 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 SEPT6Q14141 434 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 CPLX3Q8WVH0 158 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 GGNBP2Q9H3C7 697 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 TCHHQ07283 1943 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 MAPKBP1O60336 1514 aa6.99□□□□□ -1.29
VPS13B-203ENST00000358544 IGF1RP08069 1367 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 SLC4A2P04920 1241 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 TUBB2AQ13885 445 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 HLTFQ14527 1009 aaKnown RBP eCLIP6.98□□□□□ -1.294e-7■■■■■ 26.9
VPS13B-203ENST00000358544 ZGPATQ8N5A5 531 aaKnown RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 RBM42Q9BTD8 480 aaKnown RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 TUBB2BQ9BVA1 445 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 RAD50Q92878 1312 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 CCDC129Q6ZRS4 1044 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 AOPEPQ8N6M6 819 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 CAPZA3Q96KX2 299 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 PHAXQ9H814 394 aaKnown RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 KIF3BO15066 747 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 AKAP6Q13023 2319 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 DDX58O95786 925 aaKnown RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 PAFAH1B1P43034 410 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 PIP4K2BP78356 416 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 SYCP1Q15431 976 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 CCDC30Q5VVM6 783 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 LMNTD2Q8IXW0 634 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 CSB-PGBD3P0DP91 1061 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 DDX54Q8TDD1 881 aaKnown RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 SUDS3Q9H7L9 328 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 MRVI1Q9Y6F6 885 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 PPP2R5AQ15172 486 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 CDK5RAP3Q96JB5 506 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 CEP63Q96MT8 703 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 MATR3P43243 847 aaKnown RBP eCLIP6.98□□□□□ -1.292e-6■■■■□ 23.9
VPS13B-203ENST00000358544 WASF1Q92558 559 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 CCDC113Q9H0I3 377 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 TFIP11Q9UBB9 837 aaKnown RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 TMPOP42166 694 aaKnown RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 MMS22LQ6ZRQ5 1243 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 GCKP35557 465 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 IRX5P78411 483 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-203ENST00000358544 NEUROD6Q96NK8 337 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 TANGO6Q9C0B7 1094 aa6.98□□□□□ -1.29
VPS13B-203ENST00000358544 ATAD2Q6PL18 1390 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 ANKRD36BQ8N2N9 1353 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 MRPS27Q92552 414 aaKnown RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 CFTRP13569 1480 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 TSNAXIP1Q2TAA8 658 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 NAA15Q9BXJ9 866 aaKnown RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 GGT6Q6P531 493 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 USP26Q9BXU7 913 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 JRKLQ9Y4A0 524 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 DNM1Q05193 864 aaKnown RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 INTS4Q96HW7 963 aaKnown RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 TDRD9Q8NDG6 1382 aaKnown RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 ARID1BQ8NFD5 2236 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 DNA2P51530 1060 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 LACTBP83111 547 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 SAMD15Q9P1V8 674 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 CEP131Q9UPN4 1083 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 CTNNA3Q9UI47 895 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 CEP83Q9Y592 693 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 SSBP05455 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 ARID4AP29374 1257 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 KARSQ15046 597 aaKnown RBP6.97□□□□□ -1.29
VPS13B-203ENST00000358544 FBF1Q8TES7 1133 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 UBASH3AP57075 661 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 CCDC6Q16204 474 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 ZSCAN25Q6NSZ9 544 aa6.97□□□□□ -1.29
VPS13B-203ENST00000358544 ANAPC15P60006 121 aa6.96□□□□□ -1.29
VPS13B-203ENST00000358544 SEPT11Q9NVA2 429 aaKnown RBP6.96□□□□□ -1.29
VPS13B-203ENST00000358544 SDSP20132 328 aa6.96□□□□□ -1.29
VPS13B-203ENST00000358544 LARP6Q9BRS8 491 aaKnown RBP6.96□□□□□ -1.29
VPS13B-203ENST00000358544 STMN4Q9H169 189 aaPredicted RBP6.96□□□□□ -1.29
VPS13B-203ENST00000358544 NCOR1O75376 2440 aa6.96□□□□□ -1.29
VPS13B-203ENST00000358544 TIAM1Q13009 1591 aa6.96□□□□□ -1.29
VPS13B-203ENST00000358544 NDUFAB1O14561 156 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 FCHSD2O94868 740 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 C1orf141Q5JVX7 400 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 SIL1Q9H173 461 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms