RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TNNT1P13805 278 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 CCDC112Q8NEF3 446 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 PRIMPOLQ96LW4 560 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 SDF4Q9BRK5 362 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 CCDC94Q9BW85 323 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-203ENST00000358528 DNAJC25Q9H1X3 360 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 U2AF2P26368 475 aaKnown RBP eCLIP7.79□□□□□ -1.162e-12■■■■□ 24.2
CSDE1-203ENST00000358528 LRMPQ12912 555 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 ZSCAN31Q96LW9 406 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-203ENST00000358528 FAM227BQ96M60 508 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 MAP3K2Q9Y2U5 619 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 NDUFB9Q9Y6M9 179 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 METP08581 1390 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 COL3A1P02461 1466 aaPredicted RBP7.79□□□□□ -1.16
CSDE1-203ENST00000358528 NRXN1Q9ULB1 1477 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 PRR36Q9H6K5 1346 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 ATP10DQ9P241 1426 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 ZNF165P49910 485 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 TERF1P54274 439 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 TYRO3Q06418 890 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 CCDC73Q6ZRK6 1079 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 KLHDC4Q8TBB5 520 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 OSBPL3Q9H4L5 887 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 CLIP2Q9UDT6 1046 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 RAD50Q92878 1312 aa7.79□□□□□ -1.16
CSDE1-203ENST00000358528 A0A0G2JS52 829 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 PIP4K2AP48426 406 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-203ENST00000358528 NEXNQ0ZGT2 675 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 GNL2Q13823 731 aaKnown RBP7.78□□□□□ -1.16
CSDE1-203ENST00000358528 INO80Q9ULG1 1556 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-203ENST00000358528 LIG1P18858 919 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 PSME1Q06323 249 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 CDC37L1Q7L3B6 337 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 BCL2L12Q9HB09 334 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 PPP6R1Q9UPN7 881 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 AMOTL2Q9Y2J4 779 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 ADGRB2O60241 1585 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 KIF24Q5T7B8 1368 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 KCNQ3O43525 872 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 NRDCO43847 1150 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 TPM3P06753 285 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 CSB-PGBD3P0DP91 1061 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 ME1P48163 572 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 CCT2P78371 535 aaKnown RBP7.78□□□□□ -1.16
CSDE1-203ENST00000358528 NMIQ13287 307 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-203ENST00000358528 HOMER1Q86YM7 354 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 STK11IPQ8N1F8 1099 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 LGR6Q9HBX8 967 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 SH2B1Q9NRF2 756 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-203ENST00000358528 ME3Q16798 604 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 IL17REQ8NFR9 667 aa7.78□□□□□ -1.16
CSDE1-203ENST00000358528 EDC3Q96F86 508 aaKnown RBP7.78□□□□□ -1.16
CSDE1-203ENST00000358528 KIAA0232Q92628 1395 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 A0A087WWV3 80 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 KINO60870 393 aaKnown RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 SMC2O95347 1197 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 CDK11BP21127 795 aaKnown RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 FAM200AQ8TCP9 573 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 ERCC4Q92889 916 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 NRBP1Q9UHY1 535 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 HDAC5Q9UQL6 1122 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 ZC3H13Q5T200 1668 aaKnown RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 DDX58O95786 925 aaKnown RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 CREB3L3Q68CJ9 461 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 LARP1Q6PKG0 1096 aaKnown RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 MTMR6Q9Y217 621 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 PTPRMP28827 1452 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 RGS12O14924 1447 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 MAPK8IP2Q13387 824 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 RAB11FIP4Q86YS3 637 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 LRRC59Q96AG4 307 aaKnown RBP7.77□□□□□ -1.17
CSDE1-203ENST00000358528 KIDINS220Q9ULH0 1771 aa7.77□□□□□ -1.17
CSDE1-203ENST00000358528 ERICH4A6NGS2 130 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 ISM2Q6H9L7 571 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 TTC6Q86TZ1 520 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 FAM177A1Q8N128 213 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-203ENST00000358528 CCAR2Q8N163 923 aaKnown RBP7.76□□□□□ -1.17
CSDE1-203ENST00000358528 SYTL4Q96C24 671 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-203ENST00000358528 SCAND2PQ9GZW5 306 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-203ENST00000358528 ERC1Q8IUD2 1116 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 ZBTB9Q96C00 473 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 EVI5LQ96CN4 794 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 CHMP4AQ9BY43 222 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 LSG1Q9H089 658 aaKnown RBP7.76□□□□□ -1.17
CSDE1-203ENST00000358528 CD163L1Q9NR16 1453 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 BIN1O00499 593 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 ESCO1Q5FWF5 840 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 SSH3Q8TE77 659 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 MAP2P11137 1827 aaKnown RBP7.76□□□□□ -1.17
CSDE1-203ENST00000358528 DEPDC5O75140 1603 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 MROH1Q8NDA8 1641 aa7.76□□□□□ -1.17
CSDE1-203ENST00000358528 JAK2O60674 1132 aa7.75□□□□□ -1.17
CSDE1-203ENST00000358528 ANKRD1Q15327 319 aa7.75□□□□□ -1.17
CSDE1-203ENST00000358528 CHST3Q7LGC8 479 aa7.75□□□□□ -1.17
CSDE1-203ENST00000358528 BRF1Q92994 677 aa7.75□□□□□ -1.17
CSDE1-203ENST00000358528 HYPKQ9NX55 129 aa7.75□□□□□ -1.17
CSDE1-203ENST00000358528 TPCN1Q9ULQ1 816 aa7.75□□□□□ -1.17
CSDE1-203ENST00000358528 NEXMIFQ5QGS0 1516 aa7.75□□□□□ -1.17
CSDE1-203ENST00000358528 CCDC129Q6ZRS4 1044 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms