RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 SWT1Q5T5J6 900 aaKnown RBP5.06□□□□□ -1.6
CNGA1-201ENST00000358519 USP31Q70CQ4 1352 aa5.06□□□□□ -1.6
CNGA1-201ENST00000358519 CAMTA1Q9Y6Y1 1673 aa5.06□□□□□ -1.6
CNGA1-201ENST00000358519 TLL1O43897 1013 aa5.06□□□□□ -1.6
CNGA1-201ENST00000358519 GTF2E1P29083 439 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-201ENST00000358519 CNGB1Q14028 1251 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-201ENST00000358519 ZNF326Q5BKZ1 582 aaKnown RBP5.06□□□□□ -1.6
CNGA1-201ENST00000358519 KIAA1211Q6ZU35 1233 aa5.06□□□□□ -1.6
CNGA1-201ENST00000358519 NUDT18Q6ZVK8 323 aa5.06□□□□□ -1.6
CNGA1-201ENST00000358519 PPP1R1BQ9UD71 204 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-201ENST00000358519 NAP1L2Q9ULW6 460 aaPredicted RBP5.06□□□□□ -1.6
CNGA1-201ENST00000358519 PTPRUQ92729 1446 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 ADGRF5Q8IZF2 1346 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 MYH16Q9H6N6 1097 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 ZHX1Q9UKY1 873 aaPredicted RBP5.05□□□□□ -1.6
CNGA1-201ENST00000358519 CD2BP2O95400 341 aaKnown RBP5.05□□□□□ -1.6
CNGA1-201ENST00000358519 CT47B1P0C2W7 299 aaPredicted RBP5.05□□□□□ -1.6
CNGA1-201ENST00000358519 C1QTNF8P60827 252 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 TAF7LQ5H9L4 462 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 PLA2G2CQ5R387 149 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 SMAP1Q8IYB5 467 aaPredicted RBP5.05□□□□□ -1.6
CNGA1-201ENST00000358519 PNISRQ8TF01 805 aaKnown RBP5.05□□□□□ -1.6
CNGA1-201ENST00000358519 GZF1Q9H116 711 aaPredicted RBP5.05□□□□□ -1.6
CNGA1-201ENST00000358519 KNSTRNQ9Y448 316 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 PPIP5K1Q6PFW1 1433 aa5.05□□□□□ -1.6
CNGA1-201ENST00000358519 RTL1A6NKG5 1358 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 MRE11P49959 708 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 R3HDM1Q15032 1099 aaKnown RBP5.04□□□□□ -1.6
CNGA1-201ENST00000358519 DDX12PQ92771 950 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 SLC6A16Q9GZN6 736 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 SLKQ9H2G2 1235 aaPredicted RBP5.04□□□□□ -1.6
CNGA1-201ENST00000358519 CHMP4BQ9H444 224 aaKnown RBP5.04□□□□□ -1.6
CNGA1-201ENST00000358519 ADGRL3Q9HAR2 1447 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 RGPD1P0DJD0 1748 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 PLIN1O60240 522 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 CANXP27824 592 aaKnown RBP5.04□□□□□ -1.6
CNGA1-201ENST00000358519 GSK3AP49840 483 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 CCDC27Q2M243 656 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 HDGFL2Q7Z4V5 671 aaPredicted RBP5.04□□□□□ -1.6
CNGA1-201ENST00000358519 RBM27Q9P2N5 1060 aaKnown RBP5.04□□□□□ -1.6
CNGA1-201ENST00000358519 AMOTL2Q9Y2J4 779 aa5.04□□□□□ -1.6
CNGA1-201ENST00000358519 BCL9LQ86UU0 1499 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 SOS1Q07889 1333 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-201ENST00000358519 PLEKHG3A1L390 1219 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 RIPK4P57078 832 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 KRT27Q7Z3Y8 459 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 TRIM44Q96DX7 344 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-201ENST00000358519 CFAP53Q96M91 514 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 MAP7D2Q96T17 732 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 CD163L1Q9NR16 1453 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 ALS2Q96Q42 1657 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 TTC24A2A3L6 582 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-201ENST00000358519 UNC5CLQ8IV45 518 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 ZNF784Q8NCA9 323 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-201ENST00000358519 CRBNQ96SW2 442 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 FAM13BQ9NYF5 915 aa5.03□□□□□ -1.6
CNGA1-201ENST00000358519 TRPM3Q9HCF6 1732 aaPredicted RBP5.03□□□□□ -1.6
CNGA1-201ENST00000358519 KDM2BQ8NHM5 1336 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 SEPT12Q8IYM1 358 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 TMC1Q8TDI8 760 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 CHMP4AQ9BY43 222 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 ANTXR1Q9H6X2 564 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 GRPEL1Q9HAV7 217 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 OVOS2A0A0G2JMS6 1433 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 SLIT3O75094 1523 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 GDF11O95390 407 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 BECN1Q14457 450 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 NBPF14Q5TI25 921 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 ZNF428Q96B54 188 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 COL3A1P02461 1466 aaPredicted RBP5.02□□□□□ -1.61
CNGA1-201ENST00000358519 MARF1Q9Y4F3 1742 aaKnown RBP5.02□□□□□ -1.61
CNGA1-201ENST00000358519 SSH2Q76I76 1423 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 SOS2Q07890 1332 aaPredicted RBP5.02□□□□□ -1.61
CNGA1-201ENST00000358519 IL16Q14005 1332 aa5.02□□□□□ -1.61
CNGA1-201ENST00000358519 N4BP2Q86UW6 1770 aaPredicted RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 PIK3C2AO00443 1686 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 H3BM21 787 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 NCLP19338 710 aaKnown RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 HAP1P54257 671 aaPredicted RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 CFAP70Q5T0N1 1121 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 CENPQQ7L2Z9 268 aaPredicted RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 DDX17Q92841 729 aaKnown RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 SPON1Q9HCB6 807 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 PRDM10Q9NQV6 1147 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 KDM2AQ9Y2K7 1162 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 CCDC9Q9Y3X0 531 aaKnown RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 OFD1O75665 1012 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 CHGAP10645 457 aaKnown RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 TERF1P54274 439 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 DMTNQ08495 405 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 CAMK2BQ13554 666 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 NBPF1Q3BBV0 1214 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 RGL3Q3MIN7 710 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 UTP14CQ5TAP6 766 aaKnown RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 IPO4Q8TEX9 1081 aaKnown RBP5.01□□□□□ -1.61
CNGA1-201ENST00000358519 USP19O94966 1318 aa5.01□□□□□ -1.61
CNGA1-201ENST00000358519 CRYBG1Q9Y4K1 1723 aa5□□□□□ -1.61
CNGA1-201ENST00000358519 WASLO00401 505 aaPredicted RBP5□□□□□ -1.61
CNGA1-201ENST00000358519 ACTN4O43707 911 aaKnown RBP5□□□□□ -1.61
CNGA1-201ENST00000358519 TRAK2O60296 914 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms