RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 UBR3Q6ZT12 1888 aa11.33□□□□□ -0.6
SMARCAL1-202ENST00000358207 MPNDQ8N594 471 aa11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 CFAP53Q96M91 514 aa11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 CALCOCO1Q9P1Z2 691 aa11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 SSFA2P28290 1259 aa11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 NOP2P46087 812 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 NOLC1Q14978 699 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 CAVIN1Q6NZI2 390 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 COG3Q96JB2 828 aa11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 CTNNA3Q9UI47 895 aa11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 KIAA1551Q9HCM1 1747 aa11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
SMARCAL1-202ENST00000358207 PTMSP20962 102 aa11.31□□□□□ -0.6
SMARCAL1-202ENST00000358207 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-202ENST00000358207 TMX1Q9H3N1 280 aa11.31□□□□□ -0.6
SMARCAL1-202ENST00000358207 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
SMARCAL1-202ENST00000358207 MFAP1P55081 439 aaKnown RBP11.31□□□□□ -0.6
SMARCAL1-202ENST00000358207 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
SMARCAL1-202ENST00000358207 FOXD4L1Q9NU39 408 aa11.31□□□□□ -0.6
SMARCAL1-202ENST00000358207 NLRP6P59044 892 aa11.3□□□□□ -0.6
SMARCAL1-202ENST00000358207 THUMPD2Q9BTF0 503 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-202ENST00000358207 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
SMARCAL1-202ENST00000358207 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
SMARCAL1-202ENST00000358207 RIOK3O14730 519 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-202ENST00000358207 HSP90B1P14625 803 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-202ENST00000358207 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
SMARCAL1-202ENST00000358207 CHRNA2Q15822 529 aa11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 RSPH14Q9UHP6 348 aa11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 EP400Q96L91 3159 aa11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 CTIFO43310 598 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 BAG4O95429 457 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 FKBP5Q13451 457 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 EZH2Q15910 746 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 IP6K1Q92551 441 aa11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 CCDC9Q9Y3X0 531 aaKnown RBP11.29□□□□□ -0.6
SMARCAL1-202ENST00000358207 EVA1CP58658 441 aa11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 ZC3H6P61129 1189 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 BANK1Q8NDB2 785 aa11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 RBM27Q9P2N5 1060 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 DIAPH1O60610 1272 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 BCAR3O75815 825 aa11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 HNRNPH2P55795 449 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 FAM43BQ6ZT52 329 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 MORC2Q9Y6X9 1032 aaPredicted RBP11.28□□□□□ -0.6
SMARCAL1-202ENST00000358207 DHX16O60231 1041 aaKnown RBP11.27□□□□□ -0.6
SMARCAL1-202ENST00000358207 RAD51AP2Q09MP3 1159 aa11.27□□□□□ -0.6
SMARCAL1-202ENST00000358207 LMOD3Q0VAK6 560 aa11.27□□□□□ -0.6
SMARCAL1-202ENST00000358207 NBPF14Q5TI25 921 aa11.27□□□□□ -0.6
SMARCAL1-202ENST00000358207 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.6
SMARCAL1-202ENST00000358207 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 DDB1Q16531 1140 aa11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 CLEC17AQ6ZS10 378 aa11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 INSRP06213 1382 aa11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 C4BP0C0L5 1744 aa11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 PRKAR2BP31323 418 aa11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 EGFL6Q8IUX8 553 aa11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 PDZRN3Q9UPQ7 1066 aa11.27□□□□□ -0.61
SMARCAL1-202ENST00000358207 SCN11AQ9UI33 1791 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 RNF214Q8ND24 703 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 SGIP1Q9BQI5 828 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 SPTLC3Q9NUV7 552 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 NPC1L1Q9UHC9 1359 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 TNNT3P45378 269 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 GTF2A1P52655 376 aaPredicted RBP11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 SNX21Q969T3 373 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 LMBRD1Q9NUN5 540 aa11.26□□□□□ -0.61
SMARCAL1-202ENST00000358207 GYS2P54840 703 aa11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 NFATC2IPQ8NCF5 419 aa11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 CLUAP1Q96AJ1 413 aa11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 TTC12Q9H892 705 aaPredicted RBP11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 MEGF6O75095 1541 aa11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 USHBP1Q8N6Y0 703 aa11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 UBR2Q8IWV8 1755 aa11.25□□□□□ -0.61
SMARCAL1-202ENST00000358207 GOLGA6L22H0YM25 854 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 TRIM37O94972 964 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 APBA3O96018 575 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 MYCBPQ99417 103 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 NCAPGQ9BPX3 1015 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 ST7Q9NRC1 585 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 STRN4Q9NRL3 753 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 SLC27A3Q5K4L6 730 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 SIPA1L3O60292 1781 aaPredicted RBP11.24□□□□□ -0.61
SMARCAL1-202ENST00000358207 KCNQ2O43526 872 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms