RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 GNAI2P04899 355 aa17.65■□□□□ 0.42
NIPAL3-203ENST00000358028 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
NIPAL3-203ENST00000358028 ERVV-2B6SEH9 535 aa17.64■□□□□ 0.41
NIPAL3-203ENST00000358028 NBPF14Q5TI25 921 aa17.64■□□□□ 0.41
NIPAL3-203ENST00000358028 C16orf71Q8IYS4 520 aaPredicted RBP17.64■□□□□ 0.41
NIPAL3-203ENST00000358028 PALLDQ8WX93 1383 aa17.64■□□□□ 0.41
NIPAL3-203ENST00000358028 RNMTO43148 476 aaKnown RBP17.63■□□□□ 0.41
NIPAL3-203ENST00000358028 TUBGCP6Q96RT7 1819 aa17.63■□□□□ 0.41
NIPAL3-203ENST00000358028 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
NIPAL3-203ENST00000358028 GNAI3P08754 354 aa17.63■□□□□ 0.41
NIPAL3-203ENST00000358028 CABP4P57796 275 aa17.63■□□□□ 0.41
NIPAL3-203ENST00000358028 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
NIPAL3-203ENST00000358028 UBR2Q8IWV8 1755 aa17.62■□□□□ 0.41
NIPAL3-203ENST00000358028 KCNQ4P56696 695 aa17.62■□□□□ 0.41
NIPAL3-203ENST00000358028 OTUD7AQ8TE49 926 aaPredicted RBP17.62■□□□□ 0.41
NIPAL3-203ENST00000358028 ANO8Q9HCE9 1232 aaPredicted RBP17.62■□□□□ 0.41
NIPAL3-203ENST00000358028 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
NIPAL3-203ENST00000358028 CASZ1Q86V15 1759 aa17.62■□□□□ 0.41
NIPAL3-203ENST00000358028 EIF4A1P60842 406 aaKnown RBP17.61■□□□□ 0.41
NIPAL3-203ENST00000358028 NFATC2IPQ8NCF5 419 aa17.61■□□□□ 0.41
NIPAL3-203ENST00000358028 LRRC4BQ9NT99 713 aa17.61■□□□□ 0.41
NIPAL3-203ENST00000358028 APBB1O00213 710 aa17.61■□□□□ 0.41
NIPAL3-203ENST00000358028 HOXB7P09629 217 aa17.61■□□□□ 0.41
NIPAL3-203ENST00000358028 SLC52A2Q9HAB3 445 aa17.61■□□□□ 0.41
NIPAL3-203ENST00000358028 CIZ1Q9ULV3 898 aaPredicted RBP17.61■□□□□ 0.41
NIPAL3-203ENST00000358028 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
NIPAL3-203ENST00000358028 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
NIPAL3-203ENST00000358028 ATG3Q9NT62 314 aa17.6■□□□□ 0.41
NIPAL3-203ENST00000358028 COL5A3P25940 1745 aaPredicted RBP17.59■□□□□ 0.41
NIPAL3-203ENST00000358028 MCM4P33991 863 aa17.59■□□□□ 0.41
NIPAL3-203ENST00000358028 KIF2CQ99661 725 aa17.59■□□□□ 0.41
NIPAL3-203ENST00000358028 DDIT3P35638 169 aa17.58■□□□□ 0.41
NIPAL3-203ENST00000358028 ATP8B2P98198 1209 aa17.58■□□□□ 0.41
NIPAL3-203ENST00000358028 TJP1Q07157 1748 aa17.58■□□□□ 0.41
NIPAL3-203ENST00000358028 TEFQ10587 303 aa17.58■□□□□ 0.41
NIPAL3-203ENST00000358028 CHMP4AQ9BY43 222 aa17.58■□□□□ 0.41
NIPAL3-203ENST00000358028 SMARCC1Q92922 1105 aaPredicted RBP17.58■□□□□ 0.4
NIPAL3-203ENST00000358028 PHAXQ9H814 394 aaKnown RBP17.58■□□□□ 0.4
NIPAL3-203ENST00000358028 CCNL1Q9UK58 526 aaPredicted RBP17.58■□□□□ 0.4
NIPAL3-203ENST00000358028 C4BP0C0L5 1744 aa17.57■□□□□ 0.4
NIPAL3-203ENST00000358028 QSER1Q2KHR3 1735 aa17.57■□□□□ 0.4
NIPAL3-203ENST00000358028 BTBD11A6QL63 1104 aa17.57■□□□□ 0.4
NIPAL3-203ENST00000358028 SLC27A3Q5K4L6 730 aa17.57■□□□□ 0.4
NIPAL3-203ENST00000358028 L1TD1Q5T7N2 865 aaKnown RBP17.57■□□□□ 0.4
NIPAL3-203ENST00000358028 CICQ96RK0 1608 aaPredicted RBP17.57■□□□□ 0.4
NIPAL3-203ENST00000358028 KCPQ6ZWJ8 1503 aa17.57■□□□□ 0.4
NIPAL3-203ENST00000358028 SDSP20132 328 aa17.56■□□□□ 0.4
NIPAL3-203ENST00000358028 OSBPL3Q9H4L5 887 aa17.56■□□□□ 0.4
NIPAL3-203ENST00000358028 DDX11L8A8MPP1 907 aa17.56■□□□□ 0.4
NIPAL3-203ENST00000358028 KCNQ3O43525 872 aa17.56■□□□□ 0.4
NIPAL3-203ENST00000358028 EIF2S2P20042 333 aaKnown RBP17.56■□□□□ 0.4
NIPAL3-203ENST00000358028 LRRFIP2Q9Y608 721 aaKnown RBP17.56■□□□□ 0.4
NIPAL3-203ENST00000358028 LOC102724428A0A0B4J2F2 783 aa17.55■□□□□ 0.4
NIPAL3-203ENST00000358028 PNMA6EA0A0J9YXQ4 647 aa17.55■□□□□ 0.4
NIPAL3-203ENST00000358028 SIK1P57059 783 aa17.55■□□□□ 0.4
NIPAL3-203ENST00000358028 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
NIPAL3-203ENST00000358028 USP44Q9H0E7 712 aa17.55■□□□□ 0.4
NIPAL3-203ENST00000358028 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
NIPAL3-203ENST00000358028 UBR3Q6ZT12 1888 aa17.55■□□□□ 0.4
NIPAL3-203ENST00000358028 UBTFL1P0CB47 393 aaPredicted RBP17.54■□□□□ 0.4
NIPAL3-203ENST00000358028 SLC39A6Q13433 755 aa17.54■□□□□ 0.4
NIPAL3-203ENST00000358028 ZNF827Q17R98 1081 aa17.54■□□□□ 0.4
NIPAL3-203ENST00000358028 IL27Q8NEV9 243 aa17.54■□□□□ 0.4
NIPAL3-203ENST00000358028 LRRCC1Q9C099 1032 aa17.54■□□□□ 0.4
NIPAL3-203ENST00000358028 CHPF2Q9P2E5 772 aa17.54■□□□□ 0.4
NIPAL3-203ENST00000358028 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
NIPAL3-203ENST00000358028 PDE1AP54750 535 aa17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 SLC4A9Q96Q91 983 aa17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 SALL3Q9BXA9 1300 aa17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 PTMSP20962 102 aa17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
NIPAL3-203ENST00000358028 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
NIPAL3-203ENST00000358028 ITPK1Q13572 414 aa17.52■□□□□ 0.4
NIPAL3-203ENST00000358028 SLC15A2Q16348 729 aa17.52■□□□□ 0.4
NIPAL3-203ENST00000358028 BRPF3Q9ULD4 1205 aa17.52■□□□□ 0.4
NIPAL3-203ENST00000358028 K7ELQ4 463 aaPredicted RBP17.51■□□□□ 0.39
NIPAL3-203ENST00000358028 USP26Q9BXU7 913 aa17.51■□□□□ 0.39
NIPAL3-203ENST00000358028 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
NIPAL3-203ENST00000358028 ATP6V1AP38606 617 aa17.51■□□□□ 0.39
NIPAL3-203ENST00000358028 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
NIPAL3-203ENST00000358028 AKT1S1Q96B36 256 aa17.51■□□□□ 0.39
NIPAL3-203ENST00000358028 STK32BQ9NY57 414 aa17.51■□□□□ 0.39
NIPAL3-203ENST00000358028 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
NIPAL3-203ENST00000358028 RABEP1Q15276 862 aa17.5■□□□□ 0.39
NIPAL3-203ENST00000358028 BEND3Q5T5X7 828 aa17.5■□□□□ 0.39
NIPAL3-203ENST00000358028 LINC00116Q8NCU8 138 aa17.5■□□□□ 0.39
NIPAL3-203ENST00000358028 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
NIPAL3-203ENST00000358028 ADCY9O60503 1353 aa17.49■□□□□ 0.39
NIPAL3-203ENST00000358028 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
NIPAL3-203ENST00000358028 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
NIPAL3-203ENST00000358028 MX1P20591 662 aa17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 POLA2Q14181 598 aa17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 GBP4Q96PP9 640 aa17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 TRAK2O60296 914 aa17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 GIGYF1O75420 1035 aaPredicted RBP17.48■□□□□ 0.39
NIPAL3-203ENST00000358028 RAB3GAP1Q15042 981 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms