RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 HSPA5P11021 654 aaKnown RBP21.45■■□□□ 1.02
IFT20-202ENST00000357896 LBX1P52954 281 aa21.45■■□□□ 1.02
IFT20-202ENST00000357896 CCDC93Q567U6 631 aa21.45■■□□□ 1.02
IFT20-202ENST00000357896 EAPPQ56P03 285 aaPredicted RBP21.45■■□□□ 1.02
IFT20-202ENST00000357896 PNMA8AQ86V59 439 aaPredicted RBP21.45■■□□□ 1.02
IFT20-202ENST00000357896 HACL1Q9UJ83 578 aa21.45■■□□□ 1.02
IFT20-202ENST00000357896 CLEC11AQ9Y240 323 aa21.45■■□□□ 1.02
IFT20-202ENST00000357896 COL11A2P13942 1736 aaPredicted RBP21.45■■□□□ 1.02
IFT20-202ENST00000357896 SCN7AQ01118 1682 aa21.44■■□□□ 1.02
IFT20-202ENST00000357896 CAMTA2O94983 1202 aa21.44■■□□□ 1.02
IFT20-202ENST00000357896 C7orf43Q8WVR3 580 aa21.44■■□□□ 1.02
IFT20-202ENST00000357896 FMNL2Q96PY5 1086 aa21.44■■□□□ 1.02
IFT20-202ENST00000357896 SLX4Q8IY92 1834 aa21.43■■□□□ 1.02
IFT20-202ENST00000357896 MAP2K1Q02750 393 aaPredicted RBP21.43■■□□□ 1.02
IFT20-202ENST00000357896 DEFB115Q30KQ5 88 aa21.43■■□□□ 1.02
IFT20-202ENST00000357896 AMER1Q5JTC6 1135 aaPredicted RBP21.43■■□□□ 1.02
IFT20-202ENST00000357896 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
IFT20-202ENST00000357896 RASSF10A6NK89 507 aa21.42■■□□□ 1.02
IFT20-202ENST00000357896 GNAT3A8MTJ3 354 aa21.42■■□□□ 1.02
IFT20-202ENST00000357896 SLC34A2O95436 690 aa21.42■■□□□ 1.02
IFT20-202ENST00000357896 A1BGP04217 495 aa21.42■■□□□ 1.02
IFT20-202ENST00000357896 NPR1P16066 1061 aa21.42■■□□□ 1.02
IFT20-202ENST00000357896 EPHX2P34913 555 aa21.42■■□□□ 1.02
IFT20-202ENST00000357896 NBPF5PQ86XG9 351 aaPredicted RBP21.42■■□□□ 1.02
IFT20-202ENST00000357896 FKBP4Q02790 459 aaKnown RBP eCLIP21.41■■□□□ 1.02
IFT20-202ENST00000357896 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
IFT20-202ENST00000357896 DZIP3Q86Y13 1208 aaKnown RBP21.41■■□□□ 1.02
IFT20-202ENST00000357896 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
IFT20-202ENST00000357896 IL17REQ8NFR9 667 aa21.41■■□□□ 1.02
IFT20-202ENST00000357896 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
IFT20-202ENST00000357896 CNTROBQ8N137 903 aa21.4■■□□□ 1.02
IFT20-202ENST00000357896 GAS2L2Q8NHY3 880 aa21.4■■□□□ 1.02
IFT20-202ENST00000357896 ABHD8Q96I13 439 aa21.4■■□□□ 1.02
IFT20-202ENST00000357896 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
IFT20-202ENST00000357896 ZNF277Q9NRM2 450 aaPredicted RBP21.39■■□□□ 1.01
IFT20-202ENST00000357896 WDR33Q9C0J8 1336 aaKnown RBP21.38■■□□□ 1.01
IFT20-202ENST00000357896 ZNF541Q9H0D2 1346 aa21.38■■□□□ 1.01
IFT20-202ENST00000357896 KLRG2A4D1S0 409 aaPredicted RBP21.38■■□□□ 1.01
IFT20-202ENST00000357896 TPTE2Q6XPS3 522 aa21.38■■□□□ 1.01
IFT20-202ENST00000357896 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
IFT20-202ENST00000357896 HSPA8P11142 646 aaKnown RBP21.37■■□□□ 1.01
IFT20-202ENST00000357896 ABT1Q9ULW3 272 aaKnown RBP21.37■■□□□ 1.01
IFT20-202ENST00000357896 FZD9O00144 591 aa21.36■■□□□ 1.01
IFT20-202ENST00000357896 ALDH1B1P30837 517 aa21.36■■□□□ 1.01
IFT20-202ENST00000357896 TRIM26Q12899 539 aaPredicted RBP21.36■■□□□ 1.01
IFT20-202ENST00000357896 MAP1SQ66K74 1059 aaPredicted RBP21.36■■□□□ 1.01
IFT20-202ENST00000357896 GPC2Q8N158 579 aa21.36■■□□□ 1.01
IFT20-202ENST00000357896 RNF123Q5XPI4 1314 aa21.35■■□□□ 1.01
IFT20-202ENST00000357896 BTBD11A6QL63 1104 aa21.35■■□□□ 1.01
IFT20-202ENST00000357896 CACNA1SQ13698 1873 aa21.35■■□□□ 1.01
IFT20-202ENST00000357896 RGL2O15211 777 aa21.34■■□□□ 1.01
IFT20-202ENST00000357896 IARSP41252 1262 aaKnown RBP21.34■■□□□ 1.01
IFT20-202ENST00000357896 FAM161AQ3B820 660 aa21.34■■□□□ 1.01
IFT20-202ENST00000357896 JDP2Q8WYK2 163 aa21.34■■□□□ 1.01
IFT20-202ENST00000357896 BEGAINQ9BUH8 593 aa21.34■■□□□ 1.01
IFT20-202ENST00000357896 U2SURPO15042 1029 aaKnown RBP21.33■■□□□ 1.01
IFT20-202ENST00000357896 SYNE4Q8N205 404 aa21.33■■□□□ 1.01
IFT20-202ENST00000357896 ADAMTSL1Q8N6G6 1762 aa21.33■■□□□ 1
IFT20-202ENST00000357896 ECE1P42892 770 aa21.32■■□□□ 1
IFT20-202ENST00000357896 DDX21Q9NR30 783 aaKnown RBP eCLIP21.32■■□□□ 1
IFT20-202ENST00000357896 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
IFT20-202ENST00000357896 USP16Q9Y5T5 823 aa21.32■■□□□ 1
IFT20-202ENST00000357896 CEMIPQ8WUJ3 1361 aa21.32■■□□□ 1
IFT20-202ENST00000357896 OLFM4Q6UX06 510 aa21.31■■□□□ 1
IFT20-202ENST00000357896 BCORQ6W2J9 1755 aa21.31■■□□□ 1
IFT20-202ENST00000357896 KCNQ3O43525 872 aa21.3■■□□□ 1
IFT20-202ENST00000357896 SNRPA1P09661 255 aaKnown RBP21.3■■□□□ 1
IFT20-202ENST00000357896 GTF2E1P29083 439 aaPredicted RBP21.3■■□□□ 1
IFT20-202ENST00000357896 LMOD1P29536 600 aaPredicted RBP21.3■■□□□ 1
IFT20-202ENST00000357896 MLLT1Q03111 559 aaPredicted RBP21.3■■□□□ 1
IFT20-202ENST00000357896 PSMD1Q99460 953 aa21.3■■□□□ 1
IFT20-202ENST00000357896 SIPA1L3O60292 1781 aaPredicted RBP21.3■■□□□ 1
IFT20-202ENST00000357896 PIP4K2AP48426 406 aaPredicted RBP21.29■■□□□ 1
IFT20-202ENST00000357896 EIF6P56537 245 aaKnown RBP21.29■■□□□ 1
IFT20-202ENST00000357896 CC2D2BQ6DHV5 1058 aa21.29■■□□□ 1
IFT20-202ENST00000357896 CCDC85CA6NKD9 419 aa21.28■■□□□ 1
IFT20-202ENST00000357896 CC2D1BQ5T0F9 858 aaKnown RBP21.28■■□□□ 1
IFT20-202ENST00000357896 PAXIP1Q6ZW49 1069 aaPredicted RBP21.28■■□□□ 1
IFT20-202ENST00000357896 CAPNS2Q96L46 248 aa21.28■■□□□ 1
IFT20-202ENST00000357896 PER1O15534 1290 aaPredicted RBP21.27■■□□□ 1
IFT20-202ENST00000357896 RGS19P49795 217 aa21.27■■□□□ 1
IFT20-202ENST00000357896 GRIPAP1Q4V328 841 aa21.27■■□□□ 1
IFT20-202ENST00000357896 GPR101Q96P66 508 aaPredicted RBP21.27■■□□□ 1
IFT20-202ENST00000357896 GJA3Q9Y6H8 435 aa21.27■■□□□ 1
IFT20-202ENST00000357896 FAM177BA6PVY3 158 aa21.26■□□□□ 0.99
IFT20-202ENST00000357896 USP50Q70EL3 339 aaPredicted RBP21.25■□□□□ 0.99
IFT20-202ENST00000357896 PRAMEF22A3QJZ6 481 aa21.24■□□□□ 0.99
IFT20-202ENST00000357896 CRY2Q49AN0 593 aa21.24■□□□□ 0.99
IFT20-202ENST00000357896 NYXQ9GZU5 481 aa21.24■□□□□ 0.99
IFT20-202ENST00000357896 MAP2K2P36507 400 aa21.23■□□□□ 0.99
IFT20-202ENST00000357896 GRM1Q13255 1194 aa21.23■□□□□ 0.99
IFT20-202ENST00000357896 RTF1Q92541 710 aaKnown RBP21.23■□□□□ 0.99
IFT20-202ENST00000357896 PHACTR3Q96KR7 559 aa21.23■□□□□ 0.99
IFT20-202ENST00000357896 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
IFT20-202ENST00000357896 PCDH10Q9P2E7 1040 aa21.23■□□□□ 0.99
IFT20-202ENST00000357896 COL3A1P02461 1466 aaPredicted RBP21.23■□□□□ 0.99
IFT20-202ENST00000357896 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
IFT20-202ENST00000357896 NBPF26B4DH59 902 aa21.22■□□□□ 0.99
IFT20-202ENST00000357896 CYP4F22Q6NT55 531 aa21.22■□□□□ 0.99
IFT20-202ENST00000357896 NBPF10Q6P3W6 841 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 246.6 ms