RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 IGKV5-2P06315 115 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 ZNF790Q6PG37 636 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 KLHDC4Q8TBB5 520 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 HYPKQ9NX55 129 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 ERBB4Q15303 1308 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 KDM6AO15550 1401 aaPredicted RBP30.26■■■□□ 2.43
HDGF-201ENST00000357325 HSP90AB4PQ58FF6 505 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 CLASRPQ8N2M8 674 aaKnown RBP30.26■■■□□ 2.43
HDGF-201ENST00000357325 C19orf44Q9H6X5 657 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 DDX21Q9NR30 783 aaKnown RBP eCLIP30.26■■■□□ 2.43
HDGF-201ENST00000357325 OVOS2A0A0G2JMS6 1433 aa30.26■■■□□ 2.43
HDGF-201ENST00000357325 USP42Q9H9J4 1324 aaKnown RBP30.25■■■□□ 2.43
HDGF-201ENST00000357325 GRM8O00222 908 aa30.25■■■□□ 2.43
HDGF-201ENST00000357325 SASH1O94885 1247 aa30.24■■■□□ 2.43
HDGF-201ENST00000357325 LINS1Q8NG48 757 aa30.24■■■□□ 2.43
HDGF-201ENST00000357325 JARID2Q92833 1246 aaPredicted RBP30.24■■■□□ 2.43
HDGF-201ENST00000357325 PTH1RQ03431 593 aa30.23■■■□□ 2.43
HDGF-201ENST00000357325 CHRNA2Q15822 529 aa30.23■■■□□ 2.43
HDGF-201ENST00000357325 RAPGEF4Q8WZA2 1011 aa30.23■■■□□ 2.43
HDGF-201ENST00000357325 GLRX3O76003 335 aaKnown RBP30.23■■■□□ 2.43
HDGF-201ENST00000357325 AACSQ86V21 672 aa30.23■■■□□ 2.43
HDGF-201ENST00000357325 SIL1Q9H173 461 aa30.23■■■□□ 2.43
HDGF-201ENST00000357325 NPHP3Q7Z494 1330 aa30.23■■■□□ 2.43
HDGF-201ENST00000357325 SLC52A2Q9HAB3 445 aa30.22■■■□□ 2.43
HDGF-201ENST00000357325 TLR7Q9NYK1 1049 aaKnown RBP30.22■■■□□ 2.43
HDGF-201ENST00000357325 TTC41PQ6P2S7 1318 aa30.22■■■□□ 2.43
HDGF-201ENST00000357325 ECHDC1Q9NTX5 307 aa30.22■■■□□ 2.43
HDGF-201ENST00000357325 MEGF6O75095 1541 aa30.22■■■□□ 2.43
HDGF-201ENST00000357325 CCDC8Q9H0W5 538 aaPredicted RBP30.21■■■□□ 2.43
HDGF-201ENST00000357325 TMEM63CQ9P1W3 806 aa30.21■■■□□ 2.43
HDGF-201ENST00000357325 C5P01031 1676 aa30.21■■■□□ 2.43
HDGF-201ENST00000357325 PHKG2P15735 406 aa30.21■■■□□ 2.43
HDGF-201ENST00000357325 NASPP49321 788 aaPredicted RBP30.21■■■□□ 2.43
HDGF-201ENST00000357325 ZNF445P59923 1031 aa30.21■■■□□ 2.43
HDGF-201ENST00000357325 RIC3Q7Z5B4 369 aa30.21■■■□□ 2.43
HDGF-201ENST00000357325 EAF2Q96CJ1 260 aaPredicted RBP30.21■■■□□ 2.43
HDGF-201ENST00000357325 INTS4Q96HW7 963 aaKnown RBP30.21■■■□□ 2.43
HDGF-201ENST00000357325 ZNF496Q96IT1 587 aaPredicted RBP30.21■■■□□ 2.43
HDGF-201ENST00000357325 CRYBG1Q9Y4K1 1723 aa30.21■■■□□ 2.43
HDGF-201ENST00000357325 IFIT2P09913 472 aaKnown RBP30.2■■■□□ 2.43
HDGF-201ENST00000357325 ADAMTS7Q9UKP4 1686 aa30.2■■■□□ 2.42
HDGF-201ENST00000357325 EPHA10Q5JZY3 1008 aa30.2■■■□□ 2.42
HDGF-201ENST00000357325 DDX54Q8TDD1 881 aaKnown RBP30.2■■■□□ 2.42
HDGF-201ENST00000357325 XAGE3Q8WTP9 111 aa30.2■■■□□ 2.42
HDGF-201ENST00000357325 TTC14Q96N46 770 aa30.2■■■□□ 2.42
HDGF-201ENST00000357325 AK2P54819 239 aa30.19■■■□□ 2.42
HDGF-201ENST00000357325 GDPD2Q9HCC8 539 aa30.19■■■□□ 2.42
HDGF-201ENST00000357325 USP16Q9Y5T5 823 aa30.19■■■□□ 2.42
HDGF-201ENST00000357325 ALS2Q96Q42 1657 aa30.19■■■□□ 2.42
HDGF-201ENST00000357325 PRIM1P49642 420 aaKnown RBP30.19■■■□□ 2.42
HDGF-201ENST00000357325 COPS6Q7L5N1 327 aa30.19■■■□□ 2.42
HDGF-201ENST00000357325 DIAPH3Q9NSV4 1193 aa30.18■■■□□ 2.42
HDGF-201ENST00000357325 ADCK5Q3MIX3 580 aa30.18■■■□□ 2.42
HDGF-201ENST00000357325 RUFY3Q7L099 469 aa30.18■■■□□ 2.42
HDGF-201ENST00000357325 RBSNQ9H1K0 784 aa30.18■■■□□ 2.42
HDGF-201ENST00000357325 UTYO14607 1347 aa30.17■■■□□ 2.42
HDGF-201ENST00000357325 COL9A3Q14050 684 aaPredicted RBP30.17■■■□□ 2.42
HDGF-201ENST00000357325 KIAA1211Q6ZU35 1233 aa30.17■■■□□ 2.42
HDGF-201ENST00000357325 DDX58O95786 925 aaKnown RBP30.16■■■□□ 2.42
HDGF-201ENST00000357325 CSB-PGBD3P0DP91 1061 aa30.16■■■□□ 2.42
HDGF-201ENST00000357325 MYD88Q99836 296 aa30.16■■■□□ 2.42
HDGF-201ENST00000357325 EPB41L2O43491 1005 aaKnown RBP30.15■■■□□ 2.42
HDGF-201ENST00000357325 LARGE1O95461 756 aa30.15■■■□□ 2.42
HDGF-201ENST00000357325 TATP17735 454 aaPredicted RBP30.15■■■□□ 2.42
HDGF-201ENST00000357325 FAM227BQ96M60 508 aa30.15■■■□□ 2.42
HDGF-201ENST00000357325 NEURL1BA8MQ27 555 aa30.15■■■□□ 2.42
HDGF-201ENST00000357325 CYP27B1O15528 508 aa30.15■■■□□ 2.42
HDGF-201ENST00000357325 MST1RQ04912 1400 aa30.15■■■□□ 2.42
HDGF-201ENST00000357325 TMEM94Q12767 1356 aa30.14■■■□□ 2.42
HDGF-201ENST00000357325 CASTP20810 708 aaKnown RBP30.14■■■□□ 2.42
HDGF-201ENST00000357325 PRPF40BQ6NWY9 871 aaKnown RBP30.14■■■□□ 2.42
HDGF-201ENST00000357325 KIF1AQ12756 1690 aa30.14■■■□□ 2.42
HDGF-201ENST00000357325 RPAP1Q9BWH6 1393 aaPredicted RBP30.14■■■□□ 2.41
HDGF-201ENST00000357325 ATF3P18847 181 aa30.13■■■□□ 2.41
HDGF-201ENST00000357325 SCN11AQ9UI33 1791 aa30.13■■■□□ 2.41
HDGF-201ENST00000357325 SYCE3A1L190 88 aa30.13■■■□□ 2.41
HDGF-201ENST00000357325 G3BP1Q13283 466 aaKnown RBP eCLIP30.13■■■□□ 2.417e-7■■□□□ 12.2
HDGF-201ENST00000357325 LRP10Q7Z4F1 713 aa30.13■■■□□ 2.41
HDGF-201ENST00000357325 ERC1Q8IUD2 1116 aa30.12■■■□□ 2.41
HDGF-201ENST00000357325 ESPNB1AK53 854 aa30.12■■■□□ 2.41
HDGF-201ENST00000357325 GCKRQ14397 625 aa30.12■■■□□ 2.41
HDGF-201ENST00000357325 BOLA2Q9H3K6 86 aa30.12■■■□□ 2.41
HDGF-201ENST00000357325 GADD45BO75293 160 aaPredicted RBP30.11■■■□□ 2.41
HDGF-201ENST00000357325 CLCN1P35523 988 aa30.11■■■□□ 2.41
HDGF-201ENST00000357325 LARP1Q6PKG0 1096 aaKnown RBP30.11■■■□□ 2.41
HDGF-201ENST00000357325 IFNL2Q8IZJ0 200 aa30.1■■■□□ 2.41
HDGF-201ENST00000357325 TRIM44Q96DX7 344 aaPredicted RBP30.1■■■□□ 2.41
HDGF-201ENST00000357325 EDC3Q96F86 508 aaKnown RBP30.1■■■□□ 2.41
HDGF-201ENST00000357325 NMIQ13287 307 aaPredicted RBP30.09■■■□□ 2.41
HDGF-201ENST00000357325 EVI5LQ96CN4 794 aa30.09■■■□□ 2.41
HDGF-201ENST00000357325 COL18A1P39060 1754 aa30.09■■■□□ 2.41
HDGF-201ENST00000357325 GPATCH3Q96I76 525 aa30.08■■■□□ 2.41
HDGF-201ENST00000357325 JAKMIP1Q96N16 626 aaKnown RBP30.08■■■□□ 2.41
HDGF-201ENST00000357325 METTL22Q9BUU2 404 aaPredicted RBP30.08■■■□□ 2.41
HDGF-201ENST00000357325 STRCP1A6NGW2 1772 aa30.07■■■□□ 2.4
HDGF-201ENST00000357325 TPRNQ4KMQ1 711 aa30.07■■■□□ 2.4
HDGF-201ENST00000357325 PPP1R9BQ96SB3 815 aa30.07■■■□□ 2.4
HDGF-201ENST00000357325 ATP5J2-PTCD1G3V325 749 aa30.07■■■□□ 2.4
HDGF-201ENST00000357325 PTCD1O75127 700 aaKnown RBP30.07■■■□□ 2.4
HDGF-201ENST00000357325 LIMCH1Q9UPQ0 1083 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms