RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 HSPA1LP34931 641 aa18.63■□□□□ 0.57
RTN3-205ENST00000356000 SUFUQ9UMX1 484 aa18.63■□□□□ 0.57
RTN3-205ENST00000356000 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
RTN3-205ENST00000356000 UNC13BO14795 1591 aa18.63■□□□□ 0.57
RTN3-205ENST00000356000 ZBTB7BO15156 539 aaPredicted RBP18.62■□□□□ 0.57
RTN3-205ENST00000356000 ZNF75DP51815 510 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 REXO1L1PQ8IX06 675 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 L2HGDHQ9H9P8 463 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 USP27XA6NNY8 438 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 NPHP1O15259 732 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 HSP90AB3PQ58FF7 597 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 SRCIN1Q9C0H9 1055 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 ELP1O95163 1332 aa18.62■□□□□ 0.57
RTN3-205ENST00000356000 TMCO3Q6UWJ1 677 aa18.61■□□□□ 0.57
RTN3-205ENST00000356000 SIRT2Q8IXJ6 389 aa18.61■□□□□ 0.57
RTN3-205ENST00000356000 AK7Q96M32 723 aa18.61■□□□□ 0.57
RTN3-205ENST00000356000 EXOC4Q96A65 974 aa18.6■□□□□ 0.57
RTN3-205ENST00000356000 MCTP2Q6DN12 878 aa18.6■□□□□ 0.57
RTN3-205ENST00000356000 TXNDC2Q86VQ3 553 aa18.6■□□□□ 0.57
RTN3-205ENST00000356000 ARGLU1Q9NWB6 273 aaPredicted RBP18.6■□□□□ 0.57
RTN3-205ENST00000356000 KIF2AO00139 706 aaPredicted RBP18.59■□□□□ 0.57
RTN3-205ENST00000356000 OAS2P29728 719 aaKnown RBP18.59■□□□□ 0.57
RTN3-205ENST00000356000 ACTN2P35609 894 aa18.59■□□□□ 0.57
RTN3-205ENST00000356000 NBPF20Q3BBV1 942 aa18.59■□□□□ 0.57
RTN3-205ENST00000356000 FILIP1Q7Z7B0 1213 aa18.59■□□□□ 0.57
RTN3-205ENST00000356000 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
RTN3-205ENST00000356000 XIRP1Q702N8 1843 aaKnown RBP18.59■□□□□ 0.57
RTN3-205ENST00000356000 NEMFO60524 1076 aa18.59■□□□□ 0.57
RTN3-205ENST00000356000 RTL1A6NKG5 1358 aa18.59■□□□□ 0.57
RTN3-205ENST00000356000 KCNA6P17658 529 aa18.58■□□□□ 0.57
RTN3-205ENST00000356000 E2F4Q16254 413 aa18.58■□□□□ 0.57
RTN3-205ENST00000356000 CEP89Q96ST8 783 aa18.58■□□□□ 0.57
RTN3-205ENST00000356000 ZCCHC17Q9NP64 241 aaKnown RBP18.58■□□□□ 0.57
RTN3-205ENST00000356000 KCND1Q9NSA2 647 aa18.58■□□□□ 0.57
RTN3-205ENST00000356000 ADGRB2O60241 1585 aa18.58■□□□□ 0.57
RTN3-205ENST00000356000 CCDC189A1A4V9 331 aa18.58■□□□□ 0.56
RTN3-205ENST00000356000 IVLP07476 585 aa18.58■□□□□ 0.56
RTN3-205ENST00000356000 TDO2P48775 406 aa18.58■□□□□ 0.56
RTN3-205ENST00000356000 LUZP1Q86V48 1076 aa18.58■□□□□ 0.56
RTN3-205ENST00000356000 LRRC8AQ8IWT6 810 aa18.58■□□□□ 0.56
RTN3-205ENST00000356000 PPM1EQ8WY54 764 aa18.58■□□□□ 0.56
RTN3-205ENST00000356000 TRIM5Q9C035 493 aa18.58■□□□□ 0.56
RTN3-205ENST00000356000 CCDC144BQ3MJ40 725 aa18.57■□□□□ 0.56
RTN3-205ENST00000356000 ARHGAP29Q52LW3 1261 aa18.57■□□□□ 0.56
RTN3-205ENST00000356000 CCDC93Q567U6 631 aa18.57■□□□□ 0.56
RTN3-205ENST00000356000 CCDC144CPQ8IYA2 1237 aa18.57■□□□□ 0.56
RTN3-205ENST00000356000 PIK3R4Q99570 1358 aa18.57■□□□□ 0.56
RTN3-205ENST00000356000 TMED8Q6PL24 325 aaPredicted RBP18.57■□□□□ 0.56
RTN3-205ENST00000356000 MRVI1Q9Y6F6 885 aa18.57■□□□□ 0.56
RTN3-205ENST00000356000 SDSP20132 328 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 CDC25BP30305 580 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 DNAJC21Q5F1R6 531 aaKnown RBP18.56■□□□□ 0.56
RTN3-205ENST00000356000 CLIP2Q9UDT6 1046 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 EIF3CLB5ME19 914 aaKnown RBP18.56■□□□□ 0.56
RTN3-205ENST00000356000 ERC2O15083 957 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 EIF3CQ99613 913 aaKnown RBP18.56■□□□□ 0.56
RTN3-205ENST00000356000 C1orf115Q9H7X2 142 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 MYOM2P54296 1465 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 PLEKHG1Q9ULL1 1385 aa18.56■□□□□ 0.56
RTN3-205ENST00000356000 CPP00450 1065 aa18.55■□□□□ 0.56
RTN3-205ENST00000356000 RAI14Q9P0K7 980 aa18.55■□□□□ 0.56
RTN3-205ENST00000356000 ALDH1L2Q3SY69 923 aa18.55■□□□□ 0.56
RTN3-205ENST00000356000 MMS22LQ6ZRQ5 1243 aa18.55■□□□□ 0.56
RTN3-205ENST00000356000 TPRNQ4KMQ1 711 aa18.54■□□□□ 0.56
RTN3-205ENST00000356000 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
RTN3-205ENST00000356000 LRRN4CLQ8ND94 238 aa18.54■□□□□ 0.56
RTN3-205ENST00000356000 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
RTN3-205ENST00000356000 TYRO3Q06418 890 aa18.54■□□□□ 0.56
RTN3-205ENST00000356000 SMC1AQ14683 1233 aaKnown RBP18.54■□□□□ 0.56
RTN3-205ENST00000356000 TDRD7Q8NHU6 1098 aaKnown RBP18.54■□□□□ 0.56
RTN3-205ENST00000356000 CBX8Q9HC52 389 aa18.54■□□□□ 0.56
RTN3-205ENST00000356000 ADAM21Q9UKJ8 722 aa18.54■□□□□ 0.56
RTN3-205ENST00000356000 CASTP20810 708 aaKnown RBP18.53■□□□□ 0.56
RTN3-205ENST00000356000 MAP2K2P36507 400 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 ORC3Q9UBD5 711 aaPredicted RBP18.53■□□□□ 0.56
RTN3-205ENST00000356000 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 RPS6KA5O75582 802 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
RTN3-205ENST00000356000 LMAN1P49257 510 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 CORO7P57737 925 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 ANKRD20A12PQ8NF67 263 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.53■□□□□ 0.563e-6■■■□□ 16.3
RTN3-205ENST00000356000 IQGAP3Q86VI3 1631 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 RGS12O14924 1447 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 TBC1D8O95759 1140 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 HOMEZQ8IX15 550 aa18.53■□□□□ 0.56
RTN3-205ENST00000356000 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
RTN3-205ENST00000356000 SASH3O75995 380 aa18.52■□□□□ 0.56
RTN3-205ENST00000356000 SKILP12757 684 aa18.52■□□□□ 0.56
RTN3-205ENST00000356000 RPAINQ86UA6 219 aa18.52■□□□□ 0.56
RTN3-205ENST00000356000 ZSCAN16Q9H4T2 348 aaPredicted RBP18.52■□□□□ 0.56
RTN3-205ENST00000356000 FIBPO43427 364 aa18.52■□□□□ 0.55
RTN3-205ENST00000356000 ZNF853P0CG23 659 aa18.52■□□□□ 0.55
RTN3-205ENST00000356000 LEKR1Q6ZMV7 388 aa18.52■□□□□ 0.55
RTN3-205ENST00000356000 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
RTN3-205ENST00000356000 GOLIM4O00461 696 aa18.51■□□□□ 0.55
RTN3-205ENST00000356000 MCCP23508 829 aa18.51■□□□□ 0.55
RTN3-205ENST00000356000 LTKP29376 864 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms