RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 BLOC1S2Q6QNY1 142 aa13.21□□□□□ -0.3
NUDCD3-202ENST00000355451 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.3
NUDCD3-202ENST00000355451 AFG3L2Q9Y4W6 797 aa13.21□□□□□ -0.3
NUDCD3-202ENST00000355451 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 AMPD3Q01432 767 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 CCDC155Q8N6L0 562 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 TBCAO75347 108 aaKnown RBP13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 DACT3Q96B18 629 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 PHAXQ9H814 394 aaKnown RBP13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 RFC4P35249 363 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 TERF1P54274 439 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 BANK1Q8NDB2 785 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 CCDC12Q8WUD4 166 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 HAUS2Q9NVX0 235 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 ZNF530Q6P9A1 599 aaPredicted RBP13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 MAATS1Q7Z4T9 603 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 ZNF408Q9H9D4 720 aa13.2□□□□□ -0.3
NUDCD3-202ENST00000355451 GJC1P36383 396 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 TXNDC2Q86VQ3 553 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 MCM10Q7L590 875 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 CATIPQ7Z7H3 387 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 EEF2P13639 858 aaKnown RBP13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 CCDC65Q8IXS2 484 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 CCDC114Q96M63 670 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 TCP11L1Q9NUJ3 509 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 GOLGA1Q92805 767 aa13.19□□□□□ -0.3
NUDCD3-202ENST00000355451 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 ACRBPQ8NEB7 543 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 SARNPP82979 210 aaKnown RBP13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 PPP2R5CQ13362 524 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 MSANTD4Q8NCY6 345 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 CNGA1P29973 690 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 SLC8A3P57103 927 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 BAG3O95817 575 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 BRDTQ58F21 947 aaPredicted RBP13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 UBXN4Q92575 508 aa13.18□□□□□ -0.3
NUDCD3-202ENST00000355451 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 IFI16Q16666 785 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 ITM2BQ9Y287 266 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 SLC5A1P13866 664 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 CCDC50Q8IVM0 306 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 FAM114A2Q9NRY5 505 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 PTCD1O75127 700 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 NUP62CLQ9H1M0 184 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 ATP2A1O14983 1001 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 PDIA4P13667 645 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 RBM26Q5T8P6 1007 aaKnown RBP13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 IDEP14735 1019 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 CUX2O14529 1486 aa13.17□□□□□ -0.3
NUDCD3-202ENST00000355451 ERCC3P19447 782 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 PLCB3Q01970 1234 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 CKAP4Q07065 602 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 PLCB4Q15147 1175 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 PNISRQ8TF01 805 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 KRT13P13646 458 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 ZNF569Q5MCW4 686 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.16□□□□□ -0.37e-11■■■■■ 33.5
NUDCD3-202ENST00000355451 KRT32Q14532 448 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 DIXDC1Q155Q3 683 aa13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 CWC27Q6UX04 472 aaKnown RBP13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
NUDCD3-202ENST00000355451 FAM114A1Q8IWE2 563 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 MPNDQ8N594 471 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 CCDC7Q96M83 1385 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 YEATS4O95619 227 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 IPO4Q8TEX9 1081 aaKnown RBP13.15□□□□□ -0.3
NUDCD3-202ENST00000355451 KIF5BP33176 963 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 TMEM110-MUSTN1A8MSY1 372 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 AKNAD1Q5T1N1 836 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 CCDC83Q8IWF9 413 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 WDR33Q9C0J8 1336 aaKnown RBP13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 DAPK3O43293 454 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 GGNBP2Q9H3C7 697 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 SLC4A2P04920 1241 aa13.14□□□□□ -0.31
NUDCD3-202ENST00000355451 RBM10P98175 930 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms