RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SEC24BO95487 1268 aa21.34■■□□□ 1.01
VPS13B-201ENST00000355155 CASP7P55210 303 aa21.34■■□□□ 1.01
VPS13B-201ENST00000355155 TBC1D32Q96NH3 1257 aa21.34■■□□□ 1.01
VPS13B-201ENST00000355155 USP35Q9P2H5 1018 aa21.34■■□□□ 1.01
VPS13B-201ENST00000355155 USP42Q9H9J4 1324 aaKnown RBP21.34■■□□□ 1.01
VPS13B-201ENST00000355155 MYL6BP14649 208 aa21.34■■□□□ 1.01
VPS13B-201ENST00000355155 DDB1Q16531 1140 aa21.34■■□□□ 1.01
VPS13B-201ENST00000355155 GSPT1P15170 499 aaKnown RBP21.33■■□□□ 1.01
VPS13B-201ENST00000355155 CWF19L2Q2TBE0 894 aaKnown RBP21.33■■□□□ 1.01
VPS13B-201ENST00000355155 RABL6Q3YEC7 729 aaPredicted RBP21.33■■□□□ 1.01
VPS13B-201ENST00000355155 NHSQ6T4R5 1651 aa21.33■■□□□ 1
VPS13B-201ENST00000355155 C9orf78Q9NZ63 289 aaPredicted RBP21.33■■□□□ 1
VPS13B-201ENST00000355155 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1
VPS13B-201ENST00000355155 TRIM28Q13263 835 aaKnown RBP21.32■■□□□ 1
VPS13B-201ENST00000355155 ZBTB47Q9UFB7 747 aaPredicted RBP21.32■■□□□ 1
VPS13B-201ENST00000355155 SUCLG2Q96I99 432 aa21.31■■□□□ 1
VPS13B-201ENST00000355155 AIMP1Q12904 312 aaKnown RBP21.31■■□□□ 1
VPS13B-201ENST00000355155 MARCH10Q8NA82 808 aaPredicted RBP21.31■■□□□ 1
VPS13B-201ENST00000355155 MYD88Q99836 296 aa21.3■■□□□ 1
VPS13B-201ENST00000355155 H7C1W4 665 aa21.29■■□□□ 1
VPS13B-201ENST00000355155 PDE1AP54750 535 aa21.29■■□□□ 1
VPS13B-201ENST00000355155 KIF1BPQ96EK5 621 aa21.29■■□□□ 1
VPS13B-201ENST00000355155 SRGAP3O43295 1099 aa21.29■■□□□ 1
VPS13B-201ENST00000355155 STARD3NLO95772 234 aa21.29■■□□□ 1
VPS13B-201ENST00000355155 C16orf71Q8IYS4 520 aaPredicted RBP21.29■■□□□ 1
VPS13B-201ENST00000355155 SLC4A9Q96Q91 983 aa21.29■■□□□ 1
VPS13B-201ENST00000355155 ISCA1Q9BUE6 129 aa21.29■■□□□ 1
VPS13B-201ENST00000355155 CYP19A1P11511 503 aaPredicted RBP21.28■■□□□ 1
VPS13B-201ENST00000355155 EXOC6BQ9Y2D4 811 aa21.28■■□□□ 1
VPS13B-201ENST00000355155 NUTM2BA6NNL0 878 aaPredicted RBP21.28■■□□□ 1
VPS13B-201ENST00000355155 NUTM2EB1AL46 878 aaPredicted RBP21.28■■□□□ 1
VPS13B-201ENST00000355155 A1BGP04217 495 aa21.28■■□□□ 1
VPS13B-201ENST00000355155 ERC1Q8IUD2 1116 aa21.28■■□□□ 1
VPS13B-201ENST00000355155 NUTM2AQ8IVF1 878 aaPredicted RBP21.28■■□□□ 1
VPS13B-201ENST00000355155 CDC45O75419 566 aa21.28■■□□□ 1
VPS13B-201ENST00000355155 CCDC191Q8NCU4 936 aa21.28■■□□□ 1
VPS13B-201ENST00000355155 SMARCA5O60264 1052 aaPredicted RBP21.27■■□□□ 1
VPS13B-201ENST00000355155 RBM25P49756 843 aaKnown RBP21.27■■□□□ 1
VPS13B-201ENST00000355155 UPF2Q9HAU5 1272 aaKnown RBP21.27■■□□□ 1
VPS13B-201ENST00000355155 ATRNO75882 1429 aa21.27■■□□□ 1
VPS13B-201ENST00000355155 BCORQ6W2J9 1755 aa21.27■■□□□ 1
VPS13B-201ENST00000355155 DNAJC10Q8IXB1 793 aa21.27■□□□□ 0.99
VPS13B-201ENST00000355155 RHPN1Q8TCX5 695 aa21.27■□□□□ 0.99
VPS13B-201ENST00000355155 PTCD1O75127 700 aaKnown RBP21.26■□□□□ 0.99
VPS13B-201ENST00000355155 OTUD7AQ8TE49 926 aaPredicted RBP21.26■□□□□ 0.99
VPS13B-201ENST00000355155 TTLL7Q6ZT98 887 aa21.26■□□□□ 0.99
VPS13B-201ENST00000355155 BICC1Q9H694 974 aaKnown RBP21.25■□□□□ 0.99
VPS13B-201ENST00000355155 NUP98P52948 1817 aa21.25■□□□□ 0.99
VPS13B-201ENST00000355155 PRIM1P49642 420 aaKnown RBP21.24■□□□□ 0.99
VPS13B-201ENST00000355155 RFX5P48382 616 aaPredicted RBP21.24■□□□□ 0.99
VPS13B-201ENST00000355155 TBC1D9Q6ZT07 1266 aa21.24■□□□□ 0.99
VPS13B-201ENST00000355155 COPRSQ9NQ92 184 aa21.24■□□□□ 0.99
VPS13B-201ENST00000355155 SURF6O75683 361 aaKnown RBP21.24■□□□□ 0.99
VPS13B-201ENST00000355155 MX1P20591 662 aa21.24■□□□□ 0.99
VPS13B-201ENST00000355155 ONECUT3O60422 494 aaPredicted RBP21.23■□□□□ 0.99
VPS13B-201ENST00000355155 IL6STP40189 918 aaPredicted RBP21.23■□□□□ 0.99
VPS13B-201ENST00000355155 SBF2Q86WG5 1849 aa21.23■□□□□ 0.99
VPS13B-201ENST00000355155 MAP3K15Q6ZN16 1313 aa21.23■□□□□ 0.99
VPS13B-201ENST00000355155 LY75O60449 1722 aa21.23■□□□□ 0.99
VPS13B-201ENST00000355155 ERVV-1B6SEH8 477 aa21.23■□□□□ 0.99
VPS13B-201ENST00000355155 TCIRG1Q13488 830 aa21.23■□□□□ 0.99
VPS13B-201ENST00000355155 SMARCC1Q92922 1105 aaPredicted RBP21.23■□□□□ 0.99
VPS13B-201ENST00000355155 PLA2G12BQ9BX93 195 aa21.23■□□□□ 0.99
VPS13B-201ENST00000355155 CWC25Q9NXE8 425 aaPredicted RBP21.23■□□□□ 0.99
VPS13B-201ENST00000355155 TTC41PQ6P2S7 1318 aa21.22■□□□□ 0.99
VPS13B-201ENST00000355155 RGL2O15211 777 aa21.22■□□□□ 0.99
VPS13B-201ENST00000355155 LAMB2P55268 1798 aa21.22■□□□□ 0.99
VPS13B-201ENST00000355155 SDSP20132 328 aa21.22■□□□□ 0.99
VPS13B-201ENST00000355155 AK9Q5TCS8 1911 aa21.21■□□□□ 0.99
VPS13B-201ENST00000355155 PIP4K2AP48426 406 aaPredicted RBP21.21■□□□□ 0.99
VPS13B-201ENST00000355155 NGLY1Q96IV0 654 aa21.21■□□□□ 0.99
VPS13B-201ENST00000355155 FOXO4P98177 505 aa21.2■□□□□ 0.98
VPS13B-201ENST00000355155 NPM2Q86SE8 214 aaKnown RBP21.2■□□□□ 0.98
VPS13B-201ENST00000355155 BTAF1O14981 1849 aa21.2■□□□□ 0.98
VPS13B-201ENST00000355155 EPHA10Q5JZY3 1008 aa21.2■□□□□ 0.98
VPS13B-201ENST00000355155 EPB41L2O43491 1005 aaKnown RBP21.19■□□□□ 0.98
VPS13B-201ENST00000355155 HSP90AB3PQ58FF7 597 aa21.19■□□□□ 0.98
VPS13B-201ENST00000355155 GIGYF2Q6Y7W6 1299 aaKnown RBP21.19■□□□□ 0.98
VPS13B-201ENST00000355155 C22orf23Q9BZE7 217 aa21.19■□□□□ 0.98
VPS13B-201ENST00000355155 CDHR2Q9BYE9 1310 aa21.19■□□□□ 0.98
VPS13B-201ENST00000355155 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
VPS13B-201ENST00000355155 PI4K2BQ8TCG2 481 aa21.19■□□□□ 0.98
VPS13B-201ENST00000355155 A0A087WZG4 1122 aa21.18■□□□□ 0.98
VPS13B-201ENST00000355155 KIF6Q6ZMV9 814 aa21.18■□□□□ 0.98
VPS13B-201ENST00000355155 MYH3P11055 1940 aa21.18■□□□□ 0.98
VPS13B-201ENST00000355155 USP21Q9UK80 565 aa21.18■□□□□ 0.98
VPS13B-201ENST00000355155 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
VPS13B-201ENST00000355155 MYH14Q7Z406 1995 aaKnown RBP21.17■□□□□ 0.98
VPS13B-201ENST00000355155 PALLDQ8WX93 1383 aa21.17■□□□□ 0.98
VPS13B-201ENST00000355155 PCCAP05165 728 aaPredicted RBP21.17■□□□□ 0.98
VPS13B-201ENST00000355155 INTS5Q6P9B9 1019 aaKnown RBP21.17■□□□□ 0.98
VPS13B-201ENST00000355155 EIF5P55010 431 aaKnown RBP21.16■□□□□ 0.98
VPS13B-201ENST00000355155 SCN7AQ01118 1682 aa21.16■□□□□ 0.98
VPS13B-201ENST00000355155 LRP5O75197 1615 aa21.16■□□□□ 0.98
VPS13B-201ENST00000355155 SASH1O94885 1247 aa21.16■□□□□ 0.98
VPS13B-201ENST00000355155 IL17RAQ96F46 866 aa21.16■□□□□ 0.98
VPS13B-201ENST00000355155 FBXO3Q9UK99 471 aa21.16■□□□□ 0.98
VPS13B-201ENST00000355155 PTPN12Q05209 780 aaKnown RBP21.15■□□□□ 0.98
VPS13B-201ENST00000355155 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
VPS13B-201ENST00000355155 UBE3BQ7Z3V4 1068 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms