RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 CNNM1Q9NRU3 951 aa13.47□□□□□ -0.25
NEIL1-201ENST00000355059 PNPLA6Q8IY17 1366 aa13.46□□□□□ -0.25
NEIL1-201ENST00000355059 SMIM5Q71RC9 77 aa13.46□□□□□ -0.25
NEIL1-201ENST00000355059 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
NEIL1-201ENST00000355059 CIZ1Q9ULV3 898 aaPredicted RBP13.46□□□□□ -0.25
NEIL1-201ENST00000355059 LRRC7Q96NW7 1537 aa13.46□□□□□ -0.25
NEIL1-201ENST00000355059 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.25
NEIL1-201ENST00000355059 TRIM37O94972 964 aa13.46□□□□□ -0.25
NEIL1-201ENST00000355059 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
NEIL1-201ENST00000355059 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.26
NEIL1-201ENST00000355059 RTL1A6NKG5 1358 aa13.45□□□□□ -0.26
NEIL1-201ENST00000355059 CLASRPQ8N2M8 674 aaKnown RBP13.45□□□□□ -0.26
NEIL1-201ENST00000355059 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
NEIL1-201ENST00000355059 GNPATO15228 680 aa13.45□□□□□ -0.26
NEIL1-201ENST00000355059 SEPT12Q8IYM1 358 aa13.45□□□□□ -0.26
NEIL1-201ENST00000355059 TMX4Q9H1E5 349 aaPredicted RBP13.45□□□□□ -0.26
NEIL1-201ENST00000355059 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
NEIL1-201ENST00000355059 CCDC57Q2TAC2 916 aa13.45□□□□□ -0.26
NEIL1-201ENST00000355059 DZIP3Q86Y13 1208 aaKnown RBP13.45□□□□□ -0.26
NEIL1-201ENST00000355059 PIGBQ92521 554 aa13.45□□□□□ -0.26
NEIL1-201ENST00000355059 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
NEIL1-201ENST00000355059 DDX21Q9NR30 783 aaKnown RBP eCLIP13.44□□□□□ -0.26
NEIL1-201ENST00000355059 PA2G4Q9UQ80 394 aaKnown RBP13.44□□□□□ -0.26
NEIL1-201ENST00000355059 TTLL7Q6ZT98 887 aa13.44□□□□□ -0.26
NEIL1-201ENST00000355059 PPP1R42Q7Z4L9 355 aa13.44□□□□□ -0.26
NEIL1-201ENST00000355059 DNAJC2Q99543 621 aaKnown RBP13.44□□□□□ -0.26
NEIL1-201ENST00000355059 PRDM10Q9NQV6 1147 aa13.44□□□□□ -0.26
NEIL1-201ENST00000355059 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
NEIL1-201ENST00000355059 PTPRCP08575 1304 aa13.44□□□□□ -0.26
NEIL1-201ENST00000355059 KSR2Q6VAB6 950 aa13.44□□□□□ -0.26
NEIL1-201ENST00000355059 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
NEIL1-201ENST00000355059 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
NEIL1-201ENST00000355059 SECISBP2LQ93073 1101 aaKnown RBP13.44□□□□□ -0.26
NEIL1-201ENST00000355059 RFC4P35249 363 aa13.43□□□□□ -0.26
NEIL1-201ENST00000355059 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
NEIL1-201ENST00000355059 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
NEIL1-201ENST00000355059 MAP2P11137 1827 aaKnown RBP13.43□□□□□ -0.26
NEIL1-201ENST00000355059 KLHDC4Q8TBB5 520 aa13.42□□□□□ -0.26
NEIL1-201ENST00000355059 CCDC8Q9H0W5 538 aaPredicted RBP13.42□□□□□ -0.26
NEIL1-201ENST00000355059 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
NEIL1-201ENST00000355059 NIP7Q9Y221 180 aaKnown RBP eCLIP13.42□□□□□ -0.26
NEIL1-201ENST00000355059 APBA3O96018 575 aa13.42□□□□□ -0.26
NEIL1-201ENST00000355059 TFCP2L1Q9NZI6 479 aa13.42□□□□□ -0.26
NEIL1-201ENST00000355059 AACSQ86V21 672 aa13.41□□□□□ -0.26
NEIL1-201ENST00000355059 CDCA7Q9BWT1 371 aaPredicted RBP13.41□□□□□ -0.26
NEIL1-201ENST00000355059 TEX13AQ9BXU3 409 aaPredicted RBP13.41□□□□□ -0.26
NEIL1-201ENST00000355059 LRRCC1Q9C099 1032 aa13.41□□□□□ -0.26
NEIL1-201ENST00000355059 JCADQ9P266 1359 aa13.41□□□□□ -0.26
NEIL1-201ENST00000355059 GOLGA6L4A6NEF3 574 aa13.41□□□□□ -0.26
NEIL1-201ENST00000355059 NBPF7P0C2Y1 421 aaPredicted RBP13.41□□□□□ -0.26
NEIL1-201ENST00000355059 LMBR1LQ6UX01 489 aa13.41□□□□□ -0.26
NEIL1-201ENST00000355059 MPNDQ8N594 471 aa13.41□□□□□ -0.26
NEIL1-201ENST00000355059 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
NEIL1-201ENST00000355059 ERC2O15083 957 aa13.4□□□□□ -0.26
NEIL1-201ENST00000355059 RPAP2Q8IXW5 612 aaPredicted RBP13.4□□□□□ -0.26
NEIL1-201ENST00000355059 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
NEIL1-201ENST00000355059 ERVV-2B6SEH9 535 aa13.4□□□□□ -0.26
NEIL1-201ENST00000355059 ZBTB1Q9Y2K1 713 aa13.4□□□□□ -0.26
NEIL1-201ENST00000355059 ITSN1Q15811 1721 aa13.4□□□□□ -0.27
NEIL1-201ENST00000355059 ZBTB7BO15156 539 aaPredicted RBP13.4□□□□□ -0.27
NEIL1-201ENST00000355059 ANTXR1Q9H6X2 564 aa13.4□□□□□ -0.27
NEIL1-201ENST00000355059 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.27
NEIL1-201ENST00000355059 GRM8O00222 908 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 ZNF853P0CG23 659 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 KIF24Q5T7B8 1368 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 LOC102724428A0A0B4J2F2 783 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 TULP1O00294 542 aaPredicted RBP13.39□□□□□ -0.27
NEIL1-201ENST00000355059 SIK1P57059 783 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 KIAA2012Q0VF49 1180 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.39□□□□□ -0.27
NEIL1-201ENST00000355059 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
NEIL1-201ENST00000355059 BAG4O95429 457 aaKnown RBP13.39□□□□□ -0.27
NEIL1-201ENST00000355059 HCLS1P14317 486 aaPredicted RBP13.39□□□□□ -0.27
NEIL1-201ENST00000355059 HSP90AB4PQ58FF6 505 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 TOMM22Q9NS69 142 aa13.39□□□□□ -0.27
NEIL1-201ENST00000355059 R3HCC1Q9Y3T6 440 aaKnown RBP13.39□□□□□ -0.27
NEIL1-201ENST00000355059 RGPD8O14715 1765 aaPredicted RBP13.38□□□□□ -0.27
NEIL1-201ENST00000355059 CCDC173Q0VFZ6 552 aa13.38□□□□□ -0.27
NEIL1-201ENST00000355059 ZNF652Q9Y2D9 606 aa13.38□□□□□ -0.27
NEIL1-201ENST00000355059 RTCBQ9Y3I0 505 aaKnown RBP13.38□□□□□ -0.27
NEIL1-201ENST00000355059 LINS1Q8NG48 757 aa13.38□□□□□ -0.27
NEIL1-201ENST00000355059 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
NEIL1-201ENST00000355059 FAM13BQ9NYF5 915 aa13.38□□□□□ -0.27
NEIL1-201ENST00000355059 MYOM1P52179 1685 aa13.38□□□□□ -0.27
NEIL1-201ENST00000355059 RXRBP28702 533 aa13.37□□□□□ -0.27
NEIL1-201ENST00000355059 HELBQ8NG08 1087 aaPredicted RBP13.37□□□□□ -0.27
NEIL1-201ENST00000355059 SNX21Q969T3 373 aa13.37□□□□□ -0.27
NEIL1-201ENST00000355059 UPF3BQ9BZI7 483 aaKnown RBP13.37□□□□□ -0.27
NEIL1-201ENST00000355059 CEP126Q9P2H0 1117 aa13.37□□□□□ -0.27
NEIL1-201ENST00000355059 FKBP4Q02790 459 aaKnown RBP eCLIP13.37□□□□□ -0.27
NEIL1-201ENST00000355059 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
NEIL1-201ENST00000355059 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
NEIL1-201ENST00000355059 METTL24Q5JXM2 366 aa13.36□□□□□ -0.27
NEIL1-201ENST00000355059 TTC22Q5TAA0 569 aa13.36□□□□□ -0.27
NEIL1-201ENST00000355059 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
NEIL1-201ENST00000355059 OTUD7AQ8TE49 926 aaPredicted RBP13.36□□□□□ -0.27
NEIL1-201ENST00000355059 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
NEIL1-201ENST00000355059 RBM25P49756 843 aaKnown RBP13.36□□□□□ -0.27
NEIL1-201ENST00000355059 IFIT5Q13325 482 aaKnown RBP13.36□□□□□ -0.27
NEIL1-201ENST00000355059 DCCP43146 1447 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms