RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
CD46-203ENST00000354848 KRT85P78386 507 aa9.28□□□□□ -0.92
CD46-203ENST00000354848 CCDC83Q8IWF9 413 aa9.28□□□□□ -0.92
CD46-203ENST00000354848 ELP1O95163 1332 aa9.28□□□□□ -0.92
CD46-203ENST00000354848 ASXL2Q76L83 1435 aa9.28□□□□□ -0.92
CD46-203ENST00000354848 CCDC69A6NI79 296 aa9.27□□□□□ -0.92
CD46-203ENST00000354848 KIF2AO00139 706 aaPredicted RBP9.27□□□□□ -0.92
CD46-203ENST00000354848 GYS2P54840 703 aa9.27□□□□□ -0.92
CD46-203ENST00000354848 ARHGAP29Q52LW3 1261 aa9.27□□□□□ -0.92
CD46-203ENST00000354848 EFCAB2Q5VUJ9 269 aa9.27□□□□□ -0.92
CD46-203ENST00000354848 MRFAP1L1Q96HT8 127 aa9.27□□□□□ -0.92
CD46-203ENST00000354848 KCND1Q9NSA2 647 aa9.27□□□□□ -0.92
CD46-203ENST00000354848 RIMS2Q9UQ26 1411 aa9.27□□□□□ -0.92
CD46-203ENST00000354848 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
CD46-203ENST00000354848 KIF20BQ96Q89 1820 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 CD163L1Q9NR16 1453 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 ZFYVE9O95405 1425 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 FAM83GA6ND36 823 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 SOX12O15370 315 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 CASQ1P31415 396 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 ZSCAN26Q16670 478 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 CCDC93Q567U6 631 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 SARM1Q6SZW1 724 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 AFAP1Q8N556 730 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 LRRCC1Q9C099 1032 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 KIF3BO15066 747 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 GTF2A1P52655 376 aaPredicted RBP9.27□□□□□ -0.93
CD46-203ENST00000354848 SAFB2Q14151 953 aaKnown RBP eCLIP9.27□□□□□ -0.931e-6■■□□□ 13.1
CD46-203ENST00000354848 CCDC191Q8NCU4 936 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 CLSTN2Q9H4D0 955 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 ATG3Q9NT62 314 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 DDX19AQ9NUU7 478 aaKnown RBP9.27□□□□□ -0.93
CD46-203ENST00000354848 PREX1Q8TCU6 1659 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 MROH1Q8NDA8 1641 aa9.27□□□□□ -0.93
CD46-203ENST00000354848 EFCAB6Q5THR3 1501 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 CDK12Q9NYV4 1490 aaPredicted RBP9.26□□□□□ -0.93
CD46-203ENST00000354848 TTC21AQ8NDW8 1320 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 CPA1P15085 419 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 FBLN1P23142 703 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 FAM173BQ6P4H8 233 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 CTR9Q6PD62 1173 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 TMCO3Q6UWJ1 677 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 FILIP1Q7Z7B0 1213 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 UBXN6Q9BZV1 441 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 CFAP65Q6ZU64 1925 aaKnown RBP9.26□□□□□ -0.93
CD46-203ENST00000354848 SNW1Q13573 536 aaKnown RBP9.26□□□□□ -0.93
CD46-203ENST00000354848 ICE2Q659A1 982 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 HYPKQ9NX55 129 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 CPSF1Q10570 1443 aaKnown RBP9.26□□□□□ -0.93
CD46-203ENST00000354848 GOLGA6L19H0YKK7 550 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 GPS2Q13227 327 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 MLECQ14165 292 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 IQCB1Q15051 598 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 FERMT3Q86UX7 667 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 ZCCHC17Q9NP64 241 aaKnown RBP9.26□□□□□ -0.93
CD46-203ENST00000354848 ARGLU1Q9NWB6 273 aaPredicted RBP9.26□□□□□ -0.93
CD46-203ENST00000354848 STAP2Q9UGK3 403 aa9.26□□□□□ -0.93
CD46-203ENST00000354848 GOLGA6L4A6NEF3 574 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 NR1I2O75469 434 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 MMP14P50281 582 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 SRLQ86TD4 932 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 TERF2IPQ9NYB0 399 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.25□□□□□ -0.931e-6■■■□□ 14.7
CD46-203ENST00000354848 NPHP3Q7Z494 1330 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 CASTP20810 708 aaKnown RBP9.25□□□□□ -0.93
CD46-203ENST00000354848 LMOD3Q0VAK6 560 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 ST3GAL1Q11201 340 aa9.25□□□□□ -0.93
CD46-203ENST00000354848 SYTL4Q96C24 671 aaPredicted RBP9.25□□□□□ -0.93
CD46-203ENST00000354848 CWC15Q9P013 229 aaKnown RBP9.25□□□□□ -0.93
CD46-203ENST00000354848 ORC3Q9UBD5 711 aaPredicted RBP9.25□□□□□ -0.93
CD46-203ENST00000354848 ZCCHC11Q5TAX3 1644 aaKnown RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 LOC102724159A0A0B4J2E5 919 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 SEC31AO94979 1220 aaKnown RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 CAVIN2O95810 425 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 OAS2P29728 719 aaKnown RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 PWP2Q15269 919 aaKnown RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 CDC37L1Q7L3B6 337 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 ABCC3O15438 1527 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 SGSM2O43147 1006 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 E4F1Q66K89 784 aaPredicted RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 REXO1L1PQ8IX06 675 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 FBXO18Q8NFZ0 1043 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 LSG1Q9H089 658 aaKnown RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 RRP15Q9Y3B9 282 aaKnown RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 C11orf57Q6ZUT1 292 aaPredicted RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 UBXN4Q92575 508 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 SIRT1Q96EB6 747 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 PPP1R13BQ96KQ4 1090 aa9.24□□□□□ -0.93
CD46-203ENST00000354848 SCAND2PQ9GZW5 306 aaPredicted RBP9.24□□□□□ -0.93
CD46-203ENST00000354848 ATP8B1O43520 1251 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 SASH3O75995 380 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 SLC4A10Q6U841 1118 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 GOLGA5Q8TBA6 731 aa9.23□□□□□ -0.93
CD46-203ENST00000354848 SH2B1Q9NRF2 756 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms