RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 IGSF3O75054 1194 aa11.58□□□□□ -0.56
RPE-201ENST00000354506 PPFIA3O75145 1194 aa11.58□□□□□ -0.56
RPE-201ENST00000354506 SURF6O75683 361 aaKnown RBP11.58□□□□□ -0.56
RPE-201ENST00000354506 MCM5P33992 734 aa11.58□□□□□ -0.56
RPE-201ENST00000354506 NBPF6Q5VWK0 638 aa11.58□□□□□ -0.56
RPE-201ENST00000354506 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
RPE-201ENST00000354506 THEMISQ8N1K5 641 aaPredicted RBP11.58□□□□□ -0.56
RPE-201ENST00000354506 NBPF4Q96M43 638 aa11.58□□□□□ -0.56
RPE-201ENST00000354506 SIPA1L3O60292 1781 aaPredicted RBP11.58□□□□□ -0.56
RPE-201ENST00000354506 FAM173BQ6P4H8 233 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.57□□□□□ -0.56
RPE-201ENST00000354506 USP48Q86UV5 1035 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 ZHX1Q9UKY1 873 aaPredicted RBP11.57□□□□□ -0.56
RPE-201ENST00000354506 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 FER1L4A9Z1Z3 1794 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 ADAMTS7Q9UKP4 1686 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 ZKSCAN5Q9Y2L8 839 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 ADGRL3Q9HAR2 1447 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 WDR33Q9C0J8 1336 aaKnown RBP11.57□□□□□ -0.56
RPE-201ENST00000354506 SRGAP3O43295 1099 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 RUFY3Q7L099 469 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 FERMT3Q86UX7 667 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 DNAAF4Q8WXU2 420 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 CHPF2Q9P2E5 772 aa11.57□□□□□ -0.56
RPE-201ENST00000354506 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.57□□□□□ -0.56
RPE-201ENST00000354506 CAMTA1Q9Y6Y1 1673 aa11.56□□□□□ -0.56
RPE-201ENST00000354506 KCNQ3O43525 872 aa11.56□□□□□ -0.56
RPE-201ENST00000354506 CWC27Q6UX04 472 aaKnown RBP11.56□□□□□ -0.56
RPE-201ENST00000354506 LMTK3Q96Q04 1460 aa11.56□□□□□ -0.56
RPE-201ENST00000354506 OVOS2A0A0G2JMS6 1433 aa11.56□□□□□ -0.56
RPE-201ENST00000354506 PI4KAP2A4QPH2 592 aa11.56□□□□□ -0.56
RPE-201ENST00000354506 GIMAP6Q6P9H5 292 aa11.56□□□□□ -0.56
RPE-201ENST00000354506 PI4KAP1Q8N8J0 262 aa11.56□□□□□ -0.56
RPE-201ENST00000354506 CCDC9Q9Y3X0 531 aaKnown RBP11.56□□□□□ -0.56
RPE-201ENST00000354506 AK2P54819 239 aa11.55□□□□□ -0.56
RPE-201ENST00000354506 CNTROBQ8N137 903 aa11.55□□□□□ -0.56
RPE-201ENST00000354506 SNRKQ9NRH2 765 aa11.55□□□□□ -0.56
RPE-201ENST00000354506 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
RPE-201ENST00000354506 FOSBP53539 338 aa11.55□□□□□ -0.56
RPE-201ENST00000354506 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
RPE-201ENST00000354506 AKAP4Q5JQC9 854 aa11.55□□□□□ -0.56
RPE-201ENST00000354506 TSPY26PQ9H489 355 aa11.55□□□□□ -0.56
RPE-201ENST00000354506 UTYO14607 1347 aa11.54□□□□□ -0.56
RPE-201ENST00000354506 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
RPE-201ENST00000354506 PDCL3Q9H2J4 239 aa11.54□□□□□ -0.56
RPE-201ENST00000354506 LIMCH1Q9UPQ0 1083 aa11.54□□□□□ -0.56
RPE-201ENST00000354506 CAMK4Q16566 473 aa11.54□□□□□ -0.56
RPE-201ENST00000354506 CHMP4AQ9BY43 222 aa11.54□□□□□ -0.56
RPE-201ENST00000354506 VPS37CA5D8V6 355 aaPredicted RBP11.53□□□□□ -0.56
RPE-201ENST00000354506 ZSCAN22P10073 491 aaPredicted RBP11.53□□□□□ -0.56
RPE-201ENST00000354506 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 GLRX3O76003 335 aaKnown RBP11.53□□□□□ -0.56
RPE-201ENST00000354506 SYT1P21579 422 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 OS9Q13438 667 aaPredicted RBP11.53□□□□□ -0.56
RPE-201ENST00000354506 NECTIN1Q15223 517 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 UVSSAQ2YD98 709 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 SYAP1Q96A49 352 aaPredicted RBP11.53□□□□□ -0.56
RPE-201ENST00000354506 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 CCDC39Q9UFE4 941 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 LARGE1O95461 756 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 PTH1RQ03431 593 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 FUCA2Q9BTY2 467 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 PHF8Q9UPP1 1060 aa11.53□□□□□ -0.56
RPE-201ENST00000354506 SLIT3O75094 1523 aa11.52□□□□□ -0.56
RPE-201ENST00000354506 ALDH1L1O75891 902 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 CBX1P83916 185 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 VPS53Q5VIR6 699 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 CCDC83Q8IWF9 413 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 KAZALD1Q96I82 304 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 PXDNQ92626 1479 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 BTBD11A6QL63 1104 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 STX6O43752 255 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 GIGYF1O75420 1035 aaPredicted RBP11.52□□□□□ -0.57
RPE-201ENST00000354506 FBXW7Q969H0 707 aa11.52□□□□□ -0.57
RPE-201ENST00000354506 ADCY5O95622 1261 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 ADCK5Q3MIX3 580 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 DBF4Q9UBU7 674 aaPredicted RBP11.51□□□□□ -0.57
RPE-201ENST00000354506 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.51□□□□□ -0.57
RPE-201ENST00000354506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.51□□□□□ -0.57
RPE-201ENST00000354506 MRC1P22897 1456 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 RNMTO43148 476 aaKnown RBP11.51□□□□□ -0.57
RPE-201ENST00000354506 F13A1P00488 732 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 FAM184AQ8NB25 1140 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 PHF14O94880 888 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 UBE2HP62256 183 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 CCDC183Q5T5S1 534 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 KSR2Q6VAB6 950 aa11.51□□□□□ -0.57
RPE-201ENST00000354506 DNM1Q05193 864 aaKnown RBP11.5□□□□□ -0.57
RPE-201ENST00000354506 STK3Q13188 491 aa11.5□□□□□ -0.57
RPE-201ENST00000354506 PROSER3Q2NL68 480 aa11.5□□□□□ -0.57
RPE-201ENST00000354506 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
RPE-201ENST00000354506 ECHDC1Q9NTX5 307 aa11.5□□□□□ -0.57
RPE-201ENST00000354506 LETM1O95202 739 aaPredicted RBP11.5□□□□□ -0.57
RPE-201ENST00000354506 PDIA6Q15084 440 aa11.5□□□□□ -0.57
RPE-201ENST00000354506 AMOTQ4VCS5 1084 aa11.5□□□□□ -0.57
RPE-201ENST00000354506 PA2G4Q9UQ80 394 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms