RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SMARCC1Q92922 1105 aaPredicted RBP25.65■■□□□ 1.7
TRIM4-202ENST00000354241 NUCB1Q02818 461 aa25.65■■□□□ 1.7
TRIM4-202ENST00000354241 ANKRD45Q5TZF3 282 aa25.64■■□□□ 1.69
TRIM4-202ENST00000354241 DCTPP1Q9H773 170 aa25.64■■□□□ 1.69
TRIM4-202ENST00000354241 NHSQ6T4R5 1651 aa25.64■■□□□ 1.69
TRIM4-202ENST00000354241 LOC102724428A0A0B4J2F2 783 aa25.63■■□□□ 1.69
TRIM4-202ENST00000354241 NEURL1BA8MQ27 555 aa25.63■■□□□ 1.69
TRIM4-202ENST00000354241 ATP6V1AP38606 617 aa25.63■■□□□ 1.69
TRIM4-202ENST00000354241 SIK1P57059 783 aa25.63■■□□□ 1.69
TRIM4-202ENST00000354241 ATP8B2P98198 1209 aa25.63■■□□□ 1.69
TRIM4-202ENST00000354241 GRM8O00222 908 aa25.62■■□□□ 1.69
TRIM4-202ENST00000354241 CHD1LQ86WJ1 897 aa25.62■■□□□ 1.69
TRIM4-202ENST00000354241 ZBTB3Q9H5J0 574 aa25.62■■□□□ 1.69
TRIM4-202ENST00000354241 BTAF1O14981 1849 aa25.62■■□□□ 1.69
TRIM4-202ENST00000354241 LNPKQ9C0E8 428 aa25.61■■□□□ 1.69
TRIM4-202ENST00000354241 PNMA6EA0A0J9YXQ4 647 aa25.61■■□□□ 1.69
TRIM4-202ENST00000354241 ZBTB1Q9Y2K1 713 aa25.61■■□□□ 1.69
TRIM4-202ENST00000354241 CICQ96RK0 1608 aaPredicted RBP25.6■■□□□ 1.69
TRIM4-202ENST00000354241 ATP5J2-PTCD1G3V325 749 aa25.6■■□□□ 1.69
TRIM4-202ENST00000354241 SBF2Q86WG5 1849 aa25.6■■□□□ 1.69
TRIM4-202ENST00000354241 PDE4AP27815 886 aa25.59■■□□□ 1.69
TRIM4-202ENST00000354241 GCKRQ14397 625 aa25.59■■□□□ 1.69
TRIM4-202ENST00000354241 KIF6Q6ZMV9 814 aa25.59■■□□□ 1.69
TRIM4-202ENST00000354241 PTF1AQ7RTS3 328 aa25.59■■□□□ 1.69
TRIM4-202ENST00000354241 HDAC5Q9UQL6 1122 aa25.59■■□□□ 1.69
TRIM4-202ENST00000354241 IBTKQ9P2D0 1353 aaPredicted RBP25.59■■□□□ 1.69
TRIM4-202ENST00000354241 ARXQ96QS3 562 aa25.59■■□□□ 1.69
TRIM4-202ENST00000354241 UTYO14607 1347 aa25.58■■□□□ 1.69
TRIM4-202ENST00000354241 ITPK1Q13572 414 aa25.57■■□□□ 1.68
TRIM4-202ENST00000354241 BRWD3Q6RI45 1802 aa25.57■■□□□ 1.68
TRIM4-202ENST00000354241 ZNF772Q68DY9 489 aaPredicted RBP25.57■■□□□ 1.68
TRIM4-202ENST00000354241 PPP1R42Q7Z4L9 355 aa25.57■■□□□ 1.68
TRIM4-202ENST00000354241 ZBTB47Q9UFB7 747 aaPredicted RBP25.56■■□□□ 1.68
TRIM4-202ENST00000354241 APBB1O00213 710 aa25.55■■□□□ 1.68
TRIM4-202ENST00000354241 SUCLG2Q96I99 432 aa25.55■■□□□ 1.68
TRIM4-202ENST00000354241 CCDC87Q9NVE4 849 aa25.55■■□□□ 1.68
TRIM4-202ENST00000354241 ZNF831Q5JPB2 1677 aa25.55■■□□□ 1.68
TRIM4-202ENST00000354241 COL5A3P25940 1745 aaPredicted RBP25.55■■□□□ 1.68
TRIM4-202ENST00000354241 CRKLP46109 303 aaKnown RBP25.55■■□□□ 1.68
TRIM4-202ENST00000354241 NPM2Q86SE8 214 aaKnown RBP25.55■■□□□ 1.68
TRIM4-202ENST00000354241 SRGAP3O43295 1099 aa25.54■■□□□ 1.68
TRIM4-202ENST00000354241 IL6STP40189 918 aaPredicted RBP25.54■■□□□ 1.68
TRIM4-202ENST00000354241 SSH3Q8TE77 659 aa25.54■■□□□ 1.68
TRIM4-202ENST00000354241 RREB1Q92766 1687 aa25.54■■□□□ 1.68
TRIM4-202ENST00000354241 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
TRIM4-202ENST00000354241 EXOC6BQ9Y2D4 811 aa25.53■■□□□ 1.68
TRIM4-202ENST00000354241 BCL11AQ9H165 835 aa25.53■■□□□ 1.68
TRIM4-202ENST00000354241 MAP3K15Q6ZN16 1313 aa25.53■■□□□ 1.68
TRIM4-202ENST00000354241 MYH14Q7Z406 1995 aaKnown RBP25.52■■□□□ 1.68
TRIM4-202ENST00000354241 A0A087WZG4 1122 aa25.52■■□□□ 1.68
TRIM4-202ENST00000354241 POLA2Q14181 598 aa25.52■■□□□ 1.68
TRIM4-202ENST00000354241 JARID2Q92833 1246 aaPredicted RBP25.52■■□□□ 1.68
TRIM4-202ENST00000354241 CWC25Q9NXE8 425 aaPredicted RBP25.52■■□□□ 1.68
TRIM4-202ENST00000354241 RBM19Q9Y4C8 960 aaKnown RBP25.52■■□□□ 1.68
TRIM4-202ENST00000354241 RBM6P78332 1123 aaKnown RBP25.51■■□□□ 1.67
TRIM4-202ENST00000354241 UBE3BQ7Z3V4 1068 aa25.51■■□□□ 1.67
TRIM4-202ENST00000354241 KAZALD1Q96I82 304 aa25.51■■□□□ 1.67
TRIM4-202ENST00000354241 BACH2Q9BYV9 841 aa25.51■■□□□ 1.67
TRIM4-202ENST00000354241 BICC1Q9H694 974 aaKnown RBP25.51■■□□□ 1.67
TRIM4-202ENST00000354241 TCIRG1Q13488 830 aa25.5■■□□□ 1.67
TRIM4-202ENST00000354241 MTX1Q13505 466 aa25.5■■□□□ 1.67
TRIM4-202ENST00000354241 FAM161AQ3B820 660 aa25.5■■□□□ 1.67
TRIM4-202ENST00000354241 KRT27Q7Z3Y8 459 aa25.5■■□□□ 1.67
TRIM4-202ENST00000354241 SMARCA5O60264 1052 aaPredicted RBP25.49■■□□□ 1.67
TRIM4-202ENST00000354241 DZIP3Q86Y13 1208 aaKnown RBP25.49■■□□□ 1.67
TRIM4-202ENST00000354241 CCDC191Q8NCU4 936 aa25.49■■□□□ 1.67
TRIM4-202ENST00000354241 KCNQ4P56696 695 aa25.49■■□□□ 1.67
TRIM4-202ENST00000354241 ANKRD36CQ5JPF3 1778 aa25.49■■□□□ 1.67
TRIM4-202ENST00000354241 NUP98P52948 1817 aa25.48■■□□□ 1.67
TRIM4-202ENST00000354241 EIF5P55010 431 aaKnown RBP25.48■■□□□ 1.67
TRIM4-202ENST00000354241 GIGYF2Q6Y7W6 1299 aaKnown RBP25.48■■□□□ 1.67
TRIM4-202ENST00000354241 LINC00116Q8NCU8 138 aa25.48■■□□□ 1.67
TRIM4-202ENST00000354241 ISCA1Q9BUE6 129 aa25.48■■□□□ 1.67
TRIM4-202ENST00000354241 TBC1D2BQ9UPU7 963 aa25.48■■□□□ 1.67
TRIM4-202ENST00000354241 HLFQ16534 295 aa25.47■■□□□ 1.67
TRIM4-202ENST00000354241 SURF6O75683 361 aaKnown RBP25.47■■□□□ 1.67
TRIM4-202ENST00000354241 LY75O60449 1722 aa25.47■■□□□ 1.67
TRIM4-202ENST00000354241 C8orf34Q49A92 452 aa25.46■■□□□ 1.67
TRIM4-202ENST00000354241 H7C1W4 665 aa25.45■■□□□ 1.67
TRIM4-202ENST00000354241 CASP7P55210 303 aa25.45■■□□□ 1.67
TRIM4-202ENST00000354241 FAM196AQ6ZSG2 479 aa25.45■■□□□ 1.67
TRIM4-202ENST00000354241 FBXO41Q8TF61 875 aa25.45■■□□□ 1.67
TRIM4-202ENST00000354241 LRRCC1Q9C099 1032 aa25.45■■□□□ 1.67
TRIM4-202ENST00000354241 BCL11BQ9C0K0 894 aaPredicted RBP25.45■■□□□ 1.67
TRIM4-202ENST00000354241 HSP90AB3PQ58FF7 597 aa25.45■■□□□ 1.66
TRIM4-202ENST00000354241 RTL5Q5HYW3 569 aaPredicted RBP25.45■■□□□ 1.66
TRIM4-202ENST00000354241 EPHA10Q5JZY3 1008 aa25.45■■□□□ 1.66
TRIM4-202ENST00000354241 C16orf71Q8IYS4 520 aaPredicted RBP25.45■■□□□ 1.66
TRIM4-202ENST00000354241 ERVV-1B6SEH8 477 aa25.44■■□□□ 1.66
TRIM4-202ENST00000354241 CCNL1Q9UK58 526 aaPredicted RBP25.44■■□□□ 1.66
TRIM4-202ENST00000354241 COL15A1P39059 1388 aa25.43■■□□□ 1.66
TRIM4-202ENST00000354241 TRIM28Q13263 835 aaKnown RBP25.43■■□□□ 1.66
TRIM4-202ENST00000354241 RAB11FIP3O75154 756 aa25.42■■□□□ 1.66
TRIM4-202ENST00000354241 GPTP24298 496 aa25.42■■□□□ 1.66
TRIM4-202ENST00000354241 PLEKHM2Q8IWE5 1019 aa25.41■■□□□ 1.66
TRIM4-202ENST00000354241 CNTNAP4Q9C0A0 1308 aa25.41■■□□□ 1.66
TRIM4-202ENST00000354241 TAF1LQ8IZX4 1826 aa25.41■■□□□ 1.66
TRIM4-202ENST00000354241 HSP90AB4PQ58FF6 505 aa25.41■■□□□ 1.66
TRIM4-202ENST00000354241 OTUD7AQ8TE49 926 aaPredicted RBP25.41■■□□□ 1.66
TRIM4-202ENST00000354241 PA2G4Q9UQ80 394 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms