RNA–Protein interactions for RNA: ENST00000354209.7

PRKAA1-202, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-202ENST00000354209 MYD88Q99836 296 aa26.95■■□□□ 1.9
PRKAA1-202ENST00000354209 ONECUT3O60422 494 aaPredicted RBP26.94■■□□□ 1.9
PRKAA1-202ENST00000354209 CYP19A1P11511 503 aaPredicted RBP26.94■■□□□ 1.9
PRKAA1-202ENST00000354209 TTLL7Q6ZT98 887 aa26.94■■□□□ 1.9
PRKAA1-202ENST00000354209 LNPKQ9C0E8 428 aa26.94■■□□□ 1.9
PRKAA1-202ENST00000354209 PNMA6EA0A0J9YXQ4 647 aa26.94■■□□□ 1.9
PRKAA1-202ENST00000354209 C9orf78Q9NZ63 289 aaPredicted RBP26.94■■□□□ 1.9
PRKAA1-202ENST00000354209 GRM8O00222 908 aa26.93■■□□□ 1.9
PRKAA1-202ENST00000354209 KCNQ2O43526 872 aa26.92■■□□□ 1.9
PRKAA1-202ENST00000354209 PALLDQ8WX93 1383 aa26.91■■□□□ 1.9
PRKAA1-202ENST00000354209 GCKRQ14397 625 aa26.91■■□□□ 1.9
PRKAA1-202ENST00000354209 FAM161AQ3B820 660 aa26.91■■□□□ 1.9
PRKAA1-202ENST00000354209 SSH3Q8TE77 659 aa26.9■■□□□ 1.9
PRKAA1-202ENST00000354209 HDAC5Q9UQL6 1122 aa26.9■■□□□ 1.9
PRKAA1-202ENST00000354209 AFDNP55196 1824 aaKnown RBP26.9■■□□□ 1.9
PRKAA1-202ENST00000354209 NHSQ6T4R5 1651 aa26.9■■□□□ 1.9
PRKAA1-202ENST00000354209 C8orf34Q49A92 452 aa26.9■■□□□ 1.9
PRKAA1-202ENST00000354209 ZNF831Q5JPB2 1677 aa26.9■■□□□ 1.9
PRKAA1-202ENST00000354209 MTX1Q13505 466 aa26.89■■□□□ 1.9
PRKAA1-202ENST00000354209 POLA2Q14181 598 aa26.89■■□□□ 1.9
PRKAA1-202ENST00000354209 SMARCC1Q92922 1105 aaPredicted RBP26.89■■□□□ 1.9
PRKAA1-202ENST00000354209 RREB1Q92766 1687 aa26.88■■□□□ 1.89
PRKAA1-202ENST00000354209 LOC102724428A0A0B4J2F2 783 aa26.88■■□□□ 1.89
PRKAA1-202ENST00000354209 SIK1P57059 783 aa26.88■■□□□ 1.89
PRKAA1-202ENST00000354209 PPP1R42Q7Z4L9 355 aa26.88■■□□□ 1.89
PRKAA1-202ENST00000354209 ZBTB1Q9Y2K1 713 aa26.87■■□□□ 1.89
PRKAA1-202ENST00000354209 QTRT2Q9H974 415 aaKnown RBP26.86■■□□□ 1.89
PRKAA1-202ENST00000354209 SUCLG2Q96I99 432 aa26.86■■□□□ 1.89
PRKAA1-202ENST00000354209 ZBTB3Q9H5J0 574 aa26.86■■□□□ 1.89
PRKAA1-202ENST00000354209 KAZALD1Q96I82 304 aa26.85■■□□□ 1.89
PRKAA1-202ENST00000354209 COL15A1P39059 1388 aa26.85■■□□□ 1.89
PRKAA1-202ENST00000354209 ATP5J2-PTCD1G3V325 749 aa26.84■■□□□ 1.89
PRKAA1-202ENST00000354209 ATP6V1AP38606 617 aa26.84■■□□□ 1.89
PRKAA1-202ENST00000354209 SEPT12Q8IYM1 358 aa26.84■■□□□ 1.89
PRKAA1-202ENST00000354209 SRGAP3O43295 1099 aa26.84■■□□□ 1.89
PRKAA1-202ENST00000354209 EXOC6BQ9Y2D4 811 aa26.84■■□□□ 1.89
PRKAA1-202ENST00000354209 COL5A3P25940 1745 aaPredicted RBP26.83■■□□□ 1.89
PRKAA1-202ENST00000354209 IL6STP40189 918 aaPredicted RBP26.83■■□□□ 1.89
PRKAA1-202ENST00000354209 ITPK1Q13572 414 aa26.83■■□□□ 1.89
PRKAA1-202ENST00000354209 KIF6Q6ZMV9 814 aa26.82■■□□□ 1.88
PRKAA1-202ENST00000354209 ZNF330Q9Y3S2 320 aaPredicted RBP26.82■■□□□ 1.88
PRKAA1-202ENST00000354209 BTAF1O14981 1849 aa26.82■■□□□ 1.88
PRKAA1-202ENST00000354209 MAP3K15Q6ZN16 1313 aa26.81■■□□□ 1.88
PRKAA1-202ENST00000354209 ZBTB47Q9UFB7 747 aaPredicted RBP26.81■■□□□ 1.88
PRKAA1-202ENST00000354209 CASP7P55210 303 aa26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 INTS5Q6P9B9 1019 aaKnown RBP26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 BICC1Q9H694 974 aaKnown RBP26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 CCDC87Q9NVE4 849 aa26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 FAM182BQ5T319 152 aa26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 PTF1AQ7RTS3 328 aa26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 ISCA1Q9BUE6 129 aa26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 SBF2Q86WG5 1849 aa26.8■■□□□ 1.88
PRKAA1-202ENST00000354209 A0A087WZG4 1122 aa26.79■■□□□ 1.88
PRKAA1-202ENST00000354209 CRKLP46109 303 aaKnown RBP26.79■■□□□ 1.88
PRKAA1-202ENST00000354209 CCDC191Q8NCU4 936 aa26.79■■□□□ 1.88
PRKAA1-202ENST00000354209 CWC25Q9NXE8 425 aaPredicted RBP26.79■■□□□ 1.88
PRKAA1-202ENST00000354209 APBB1O00213 710 aa26.78■■□□□ 1.88
PRKAA1-202ENST00000354209 SMARCA5O60264 1052 aaPredicted RBP26.78■■□□□ 1.88
PRKAA1-202ENST00000354209 TCIRG1Q13488 830 aa26.78■■□□□ 1.88
PRKAA1-202ENST00000354209 UBE3BQ7Z3V4 1068 aa26.78■■□□□ 1.88
PRKAA1-202ENST00000354209 LRRCC1Q9C099 1032 aa26.78■■□□□ 1.88
PRKAA1-202ENST00000354209 H7C1W4 665 aa26.77■■□□□ 1.88
PRKAA1-202ENST00000354209 EIF5P55010 431 aaKnown RBP26.77■■□□□ 1.88
PRKAA1-202ENST00000354209 TRIM28Q13263 835 aaKnown RBP26.77■■□□□ 1.88
PRKAA1-202ENST00000354209 PLEKHM2Q8IWE5 1019 aa26.77■■□□□ 1.88
PRKAA1-202ENST00000354209 GIGYF2Q6Y7W6 1299 aaKnown RBP26.77■■□□□ 1.88
PRKAA1-202ENST00000354209 NOP58Q9Y2X3 529 aaKnown RBP26.77■■□□□ 1.88
PRKAA1-202ENST00000354209 RAB11FIP3O75154 756 aa26.76■■□□□ 1.87
PRKAA1-202ENST00000354209 C16orf71Q8IYS4 520 aaPredicted RBP26.76■■□□□ 1.87
PRKAA1-202ENST00000354209 MYH14Q7Z406 1995 aaKnown RBP26.75■■□□□ 1.87
PRKAA1-202ENST00000354209 ANKRD36CQ5JPF3 1778 aa26.75■■□□□ 1.87
PRKAA1-202ENST00000354209 SURF6O75683 361 aaKnown RBP26.75■■□□□ 1.87
PRKAA1-202ENST00000354209 BMP2KLQ5H9B9 411 aa26.75■■□□□ 1.87
PRKAA1-202ENST00000354209 EPHA10Q5JZY3 1008 aa26.75■■□□□ 1.87
PRKAA1-202ENST00000354209 RABL6Q3YEC7 729 aaPredicted RBP26.75■■□□□ 1.87
PRKAA1-202ENST00000354209 ERVV-1B6SEH8 477 aa26.74■■□□□ 1.87
PRKAA1-202ENST00000354209 HSP90AB4PQ58FF6 505 aa26.73■■□□□ 1.87
PRKAA1-202ENST00000354209 DZIP3Q86Y13 1208 aaKnown RBP26.73■■□□□ 1.87
PRKAA1-202ENST00000354209 OTUD7AQ8TE49 926 aaPredicted RBP26.73■■□□□ 1.87
PRKAA1-202ENST00000354209 JARID2Q92833 1246 aaPredicted RBP26.73■■□□□ 1.87
PRKAA1-202ENST00000354209 HLFQ16534 295 aa26.73■■□□□ 1.87
PRKAA1-202ENST00000354209 LY75O60449 1722 aa26.72■■□□□ 1.87
PRKAA1-202ENST00000354209 HSP90AB3PQ58FF7 597 aa26.72■■□□□ 1.87
PRKAA1-202ENST00000354209 ZNF772Q68DY9 489 aaPredicted RBP26.72■■□□□ 1.87
PRKAA1-202ENST00000354209 NPM2Q86SE8 214 aaKnown RBP26.72■■□□□ 1.87
PRKAA1-202ENST00000354209 BRWD3Q6RI45 1802 aa26.72■■□□□ 1.87
PRKAA1-202ENST00000354209 SALL3Q9BXA9 1300 aa26.72■■□□□ 1.87
PRKAA1-202ENST00000354209 LINC00116Q8NCU8 138 aa26.71■■□□□ 1.87
PRKAA1-202ENST00000354209 ARXQ96QS3 562 aa26.71■■□□□ 1.87
PRKAA1-202ENST00000354209 NUP98P52948 1817 aa26.7■■□□□ 1.87
PRKAA1-202ENST00000354209 RHPN1Q8TCX5 695 aa26.7■■□□□ 1.86
PRKAA1-202ENST00000354209 KIF1BPQ96EK5 621 aa26.7■■□□□ 1.86
PRKAA1-202ENST00000354209 TBC1D2BQ9UPU7 963 aa26.7■■□□□ 1.86
PRKAA1-202ENST00000354209 CNTNAP4Q9C0A0 1308 aa26.69■■□□□ 1.86
PRKAA1-202ENST00000354209 OSBPL3Q9H4L5 887 aa26.69■■□□□ 1.86
PRKAA1-202ENST00000354209 PA2G4Q9UQ80 394 aaKnown RBP26.69■■□□□ 1.86
PRKAA1-202ENST00000354209 FOXO4P98177 505 aa26.68■■□□□ 1.86
PRKAA1-202ENST00000354209 TTC22Q5TAA0 569 aa26.68■■□□□ 1.86
PRKAA1-202ENST00000354209 GSPT1P15170 499 aaKnown RBP26.67■■□□□ 1.86
PRKAA1-202ENST00000354209 RBM6P78332 1123 aaKnown RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms