RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 BTBD11A6QL63 1104 aa24.91■■□□□ 1.58
KDM5C-201ENST00000349663 POTEIP0CG38 1075 aa24.91■■□□□ 1.58
KDM5C-201ENST00000349663 POTEJP0CG39 1038 aa24.91■■□□□ 1.58
KDM5C-201ENST00000349663 CCER1Q8TC90 406 aaPredicted RBP24.91■■□□□ 1.58
KDM5C-201ENST00000349663 SCN7AQ01118 1682 aa24.91■■□□□ 1.58
KDM5C-201ENST00000349663 IQCA1LA6NCM1 817 aa24.9■■□□□ 1.58
KDM5C-201ENST00000349663 KCNQ3O43525 872 aa24.9■■□□□ 1.58
KDM5C-201ENST00000349663 COL11A2P13942 1736 aaPredicted RBP24.89■■□□□ 1.58
KDM5C-201ENST00000349663 CEMIPQ8WUJ3 1361 aa24.89■■□□□ 1.57
KDM5C-201ENST00000349663 CNGB1Q14028 1251 aaPredicted RBP24.88■■□□□ 1.57
KDM5C-201ENST00000349663 CLEC4GQ6UXB4 293 aa24.88■■□□□ 1.57
KDM5C-201ENST00000349663 NBPF5PQ86XG9 351 aaPredicted RBP24.88■■□□□ 1.57
KDM5C-201ENST00000349663 USP16Q9Y5T5 823 aa24.88■■□□□ 1.57
KDM5C-201ENST00000349663 SLX4Q8IY92 1834 aa24.88■■□□□ 1.57
KDM5C-201ENST00000349663 LDHDQ86WU2 507 aa24.87■■□□□ 1.57
KDM5C-201ENST00000349663 C7orf43Q8WVR3 580 aa24.87■■□□□ 1.57
KDM5C-201ENST00000349663 COL3A1P02461 1466 aaPredicted RBP24.87■■□□□ 1.57
KDM5C-201ENST00000349663 CCDC93Q567U6 631 aa24.86■■□□□ 1.57
KDM5C-201ENST00000349663 L3MBTL3Q96JM7 780 aaPredicted RBP24.86■■□□□ 1.57
KDM5C-201ENST00000349663 PHACTR3Q96KR7 559 aa24.86■■□□□ 1.57
KDM5C-201ENST00000349663 ZNF652Q9Y2D9 606 aa24.86■■□□□ 1.57
KDM5C-201ENST00000349663 NPC1L1Q9UHC9 1359 aa24.85■■□□□ 1.57
KDM5C-201ENST00000349663 NPR1P16066 1061 aa24.85■■□□□ 1.57
KDM5C-201ENST00000349663 PIP4K2AP48426 406 aaPredicted RBP24.85■■□□□ 1.57
KDM5C-201ENST00000349663 TAF1DQ9H5J8 278 aaPredicted RBP24.85■■□□□ 1.57
KDM5C-201ENST00000349663 SIPA1L3O60292 1781 aaPredicted RBP24.85■■□□□ 1.57
KDM5C-201ENST00000349663 PASKQ96RG2 1323 aa24.84■■□□□ 1.57
KDM5C-201ENST00000349663 CNTNAP1P78357 1384 aa24.83■■□□□ 1.57
KDM5C-201ENST00000349663 SNRPA1P09661 255 aaKnown RBP24.83■■□□□ 1.57
KDM5C-201ENST00000349663 PRKAR2BP31323 418 aa24.83■■□□□ 1.57
KDM5C-201ENST00000349663 TPTE2Q6XPS3 522 aa24.83■■□□□ 1.57
KDM5C-201ENST00000349663 PRAMEF22A3QJZ6 481 aa24.82■■□□□ 1.56
KDM5C-201ENST00000349663 KLRG2A4D1S0 409 aaPredicted RBP24.82■■□□□ 1.56
KDM5C-201ENST00000349663 FKBP4Q02790 459 aaKnown RBP eCLIP24.82■■□□□ 1.56
KDM5C-201ENST00000349663 FOXN1O15353 648 aa24.81■■□□□ 1.56
KDM5C-201ENST00000349663 RSPH6AQ9H0K4 717 aa24.81■■□□□ 1.56
KDM5C-201ENST00000349663 ZNF277Q9NRM2 450 aaPredicted RBP24.81■■□□□ 1.56
KDM5C-201ENST00000349663 TMEM88BA6NKF7 163 aa24.8■■□□□ 1.56
KDM5C-201ENST00000349663 ITGBL1O95965 494 aaPredicted RBP24.8■■□□□ 1.56
KDM5C-201ENST00000349663 RTKN2Q8IZC4 609 aa24.8■■□□□ 1.56
KDM5C-201ENST00000349663 RTF1Q92541 710 aaKnown RBP24.8■■□□□ 1.56
KDM5C-201ENST00000349663 NIP7Q9Y221 180 aaKnown RBP eCLIP24.8■■□□□ 1.56
KDM5C-201ENST00000349663 EAPPQ56P03 285 aaPredicted RBP24.79■■□□□ 1.56
KDM5C-201ENST00000349663 CFAP53Q96M91 514 aa24.79■■□□□ 1.56
KDM5C-201ENST00000349663 HACL1Q9UJ83 578 aa24.79■■□□□ 1.56
KDM5C-201ENST00000349663 RGL2O15211 777 aa24.78■■□□□ 1.56
KDM5C-201ENST00000349663 VEGFBP49765 207 aa24.78■■□□□ 1.56
KDM5C-201ENST00000349663 PRDM10Q9NQV6 1147 aa24.78■■□□□ 1.56
KDM5C-201ENST00000349663 CLEC11AQ9Y240 323 aa24.78■■□□□ 1.56
KDM5C-201ENST00000349663 ZNF541Q9H0D2 1346 aa24.78■■□□□ 1.56
KDM5C-201ENST00000349663 CACNA1SQ13698 1873 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 ALDH1B1P30837 517 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 OLFM4Q6UX06 510 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 MCM10Q7L590 875 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 AIDAQ96BJ3 306 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 NUDCQ9Y266 331 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 BCORQ6W2J9 1755 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 ARFGEF2Q9Y6D5 1785 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 SCN4AP35499 1836 aa24.77■■□□□ 1.56
KDM5C-201ENST00000349663 FAM177BA6PVY3 158 aa24.76■■□□□ 1.55
KDM5C-201ENST00000349663 NBPF26B4DH59 902 aa24.76■■□□□ 1.55
KDM5C-201ENST00000349663 CTCFP49711 727 aaPredicted RBP24.76■■□□□ 1.55
KDM5C-201ENST00000349663 NBPF10Q6P3W6 841 aaKnown RBP24.76■■□□□ 1.55
KDM5C-201ENST00000349663 NBPF15Q8N660 670 aa24.76■■□□□ 1.55
KDM5C-201ENST00000349663 EPHX2P34913 555 aa24.75■■□□□ 1.55
KDM5C-201ENST00000349663 PNMA8AQ86V59 439 aaPredicted RBP24.75■■□□□ 1.55
KDM5C-201ENST00000349663 GTF2E1P29083 439 aaPredicted RBP24.74■■□□□ 1.55
KDM5C-201ENST00000349663 SYNE4Q8N205 404 aa24.74■■□□□ 1.55
KDM5C-201ENST00000349663 FZD9O00144 591 aa24.73■■□□□ 1.55
KDM5C-201ENST00000349663 U2AF1L5P0DN76 240 aaPredicted RBP24.73■■□□□ 1.55
KDM5C-201ENST00000349663 IARSP41252 1262 aaKnown RBP24.73■■□□□ 1.55
KDM5C-201ENST00000349663 U2AF1Q01081 240 aaKnown RBP eCLIP24.73■■□□□ 1.55
KDM5C-201ENST00000349663 HLFQ16534 295 aa24.72■■□□□ 1.55
KDM5C-201ENST00000349663 CNTROBQ8N137 903 aa24.72■■□□□ 1.55
KDM5C-201ENST00000349663 WBP1LQ9NX94 342 aa24.72■■□□□ 1.55
KDM5C-201ENST00000349663 RNF123Q5XPI4 1314 aa24.71■■□□□ 1.55
KDM5C-201ENST00000349663 HTATSF1O43719 755 aaKnown RBP24.71■■□□□ 1.55
KDM5C-201ENST00000349663 DCTN1Q14203 1278 aa24.71■■□□□ 1.55
KDM5C-201ENST00000349663 GPC2Q8N158 579 aa24.71■■□□□ 1.55
KDM5C-201ENST00000349663 DEFB115Q30KQ5 88 aa24.7■■□□□ 1.54
KDM5C-201ENST00000349663 MAP1SQ66K74 1059 aaPredicted RBP24.7■■□□□ 1.54
KDM5C-201ENST00000349663 JDP2Q8WYK2 163 aa24.7■■□□□ 1.54
KDM5C-201ENST00000349663 TAF7Q15545 349 aaPredicted RBP24.69■■□□□ 1.54
KDM5C-201ENST00000349663 PSMD1Q99460 953 aa24.69■■□□□ 1.54
KDM5C-201ENST00000349663 RASSF10A6NK89 507 aa24.68■■□□□ 1.54
KDM5C-201ENST00000349663 NYXQ9GZU5 481 aa24.68■■□□□ 1.54
KDM5C-201ENST00000349663 LBX1P52954 281 aa24.67■■□□□ 1.54
KDM5C-201ENST00000349663 CRY2Q49AN0 593 aa24.67■■□□□ 1.54
KDM5C-201ENST00000349663 CC2D2BQ6DHV5 1058 aa24.67■■□□□ 1.54
KDM5C-201ENST00000349663 MIS18AQ9NYP9 233 aa24.66■■□□□ 1.54
KDM5C-201ENST00000349663 ERVV-1B6SEH8 477 aa24.65■■□□□ 1.54
KDM5C-201ENST00000349663 EIF6P56537 245 aaKnown RBP24.65■■□□□ 1.54
KDM5C-201ENST00000349663 NGEFQ8N5V2 710 aa24.65■■□□□ 1.54
KDM5C-201ENST00000349663 GJA3Q9Y6H8 435 aa24.65■■□□□ 1.54
KDM5C-201ENST00000349663 MAP2K1Q02750 393 aaPredicted RBP24.64■■□□□ 1.54
KDM5C-201ENST00000349663 NUTM1Q86Y26 1132 aa24.64■■□□□ 1.54
KDM5C-201ENST00000349663 ABT1Q9ULW3 272 aaKnown RBP24.64■■□□□ 1.54
KDM5C-201ENST00000349663 WDR33Q9C0J8 1336 aaKnown RBP24.63■■□□□ 1.53
KDM5C-201ENST00000349663 ADAMTSL1Q8N6G6 1762 aa24.63■■□□□ 1.53
KDM5C-201ENST00000349663 PPP2R1AP30153 589 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms