RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CHMLP26374 656 aa24.93■■□□□ 1.58
CHRNA3-202ENST00000348639 KAZALD1Q96I82 304 aa24.93■■□□□ 1.58
CHRNA3-202ENST00000348639 OS9Q13438 667 aaPredicted RBP24.91■■□□□ 1.58
CHRNA3-202ENST00000348639 ERC1Q8IUD2 1116 aa24.91■■□□□ 1.58
CHRNA3-202ENST00000348639 PI4K2BQ8TCG2 481 aa24.91■■□□□ 1.58
CHRNA3-202ENST00000348639 GCKRQ14397 625 aa24.91■■□□□ 1.58
CHRNA3-202ENST00000348639 BICC1Q9H694 974 aaKnown RBP24.91■■□□□ 1.58
CHRNA3-202ENST00000348639 USP42Q9H9J4 1324 aaKnown RBP24.91■■□□□ 1.58
CHRNA3-202ENST00000348639 LAMB4A4D0S4 1761 aa24.9■■□□□ 1.58
CHRNA3-202ENST00000348639 UNC5CLQ8IV45 518 aa24.9■■□□□ 1.58
CHRNA3-202ENST00000348639 MYD88Q99836 296 aa24.9■■□□□ 1.58
CHRNA3-202ENST00000348639 ERBB4Q15303 1308 aa24.9■■□□□ 1.58
CHRNA3-202ENST00000348639 ROBO1Q9Y6N7 1651 aa24.9■■□□□ 1.58
CHRNA3-202ENST00000348639 CIZ1Q9ULV3 898 aaPredicted RBP24.89■■□□□ 1.57
CHRNA3-202ENST00000348639 TTC41PQ6P2S7 1318 aa24.88■■□□□ 1.57
CHRNA3-202ENST00000348639 CLASRPQ8N2M8 674 aaKnown RBP24.88■■□□□ 1.57
CHRNA3-202ENST00000348639 PA2G4Q9UQ80 394 aaKnown RBP24.88■■□□□ 1.57
CHRNA3-202ENST00000348639 PTCD1O75127 700 aaKnown RBP24.87■■□□□ 1.57
CHRNA3-202ENST00000348639 GSE1Q14687 1217 aa24.87■■□□□ 1.57
CHRNA3-202ENST00000348639 SHANK3Q9BYB0 1731 aa24.87■■□□□ 1.57
CHRNA3-202ENST00000348639 UBR2Q8IWV8 1755 aa24.86■■□□□ 1.57
CHRNA3-202ENST00000348639 HSP90AA1P07900 732 aaKnown RBP24.86■■□□□ 1.57
CHRNA3-202ENST00000348639 PLBD2Q8NHP8 589 aa24.86■■□□□ 1.57
CHRNA3-202ENST00000348639 PAPPAQ13219 1627 aa24.84■■□□□ 1.57
CHRNA3-202ENST00000348639 KCPQ6ZWJ8 1503 aa24.84■■□□□ 1.57
CHRNA3-202ENST00000348639 EPB41L2O43491 1005 aaKnown RBP24.84■■□□□ 1.57
CHRNA3-202ENST00000348639 GLRX3O76003 335 aaKnown RBP24.84■■□□□ 1.57
CHRNA3-202ENST00000348639 CNTROBQ8N137 903 aa24.84■■□□□ 1.57
CHRNA3-202ENST00000348639 NBPF26B4DH59 902 aa24.83■■□□□ 1.56
CHRNA3-202ENST00000348639 ST18O60284 1047 aa24.83■■□□□ 1.56
CHRNA3-202ENST00000348639 G3BP1Q13283 466 aaKnown RBP eCLIP24.83■■□□□ 1.56
CHRNA3-202ENST00000348639 NBPF14Q5TI25 921 aa24.83■■□□□ 1.56
CHRNA3-202ENST00000348639 NBPF10Q6P3W6 841 aaKnown RBP24.83■■□□□ 1.56
CHRNA3-202ENST00000348639 NBPF15Q8N660 670 aa24.83■■□□□ 1.56
CHRNA3-202ENST00000348639 COL15A1P39059 1388 aa24.82■■□□□ 1.56
CHRNA3-202ENST00000348639 TNS2Q63HR2 1409 aa24.82■■□□□ 1.56
CHRNA3-202ENST00000348639 ARFGEF2Q9Y6D5 1785 aa24.82■■□□□ 1.56
CHRNA3-202ENST00000348639 MCCP23508 829 aa24.82■■□□□ 1.56
CHRNA3-202ENST00000348639 MCM4P33991 863 aa24.81■■□□□ 1.56
CHRNA3-202ENST00000348639 GPATCH3Q96I76 525 aa24.81■■□□□ 1.56
CHRNA3-202ENST00000348639 ANO2Q9NQ90 1003 aa24.81■■□□□ 1.56
CHRNA3-202ENST00000348639 TMOD3Q9NYL9 352 aa24.81■■□□□ 1.56
CHRNA3-202ENST00000348639 SASH1O94885 1247 aa24.81■■□□□ 1.56
CHRNA3-202ENST00000348639 IFIT2P09913 472 aaKnown RBP24.81■■□□□ 1.56
CHRNA3-202ENST00000348639 ECHDC1Q9NTX5 307 aa24.81■■□□□ 1.56
CHRNA3-202ENST00000348639 MAP4K4O95819 1239 aaPredicted RBP24.8■■□□□ 1.56
CHRNA3-202ENST00000348639 ANAPC15P60006 121 aa24.8■■□□□ 1.56
CHRNA3-202ENST00000348639 EPHA10Q5JZY3 1008 aa24.8■■□□□ 1.56
CHRNA3-202ENST00000348639 ATP5J2-PTCD1G3V325 749 aa24.79■■□□□ 1.56
CHRNA3-202ENST00000348639 A1BGP04217 495 aa24.79■■□□□ 1.56
CHRNA3-202ENST00000348639 AK9Q5TCS8 1911 aa24.79■■□□□ 1.56
CHRNA3-202ENST00000348639 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
CHRNA3-202ENST00000348639 COL14A1Q05707 1796 aaKnown RBP24.79■■□□□ 1.56
CHRNA3-202ENST00000348639 JARID2Q92833 1246 aaPredicted RBP24.79■■□□□ 1.56
CHRNA3-202ENST00000348639 IL17RAQ96F46 866 aa24.79■■□□□ 1.56
CHRNA3-202ENST00000348639 AACSQ86V21 672 aa24.78■■□□□ 1.56
CHRNA3-202ENST00000348639 AFDNP55196 1824 aaKnown RBP24.78■■□□□ 1.56
CHRNA3-202ENST00000348639 RAB3GAP1Q15042 981 aa24.78■■□□□ 1.56
CHRNA3-202ENST00000348639 RABL6Q3YEC7 729 aaPredicted RBP24.78■■□□□ 1.56
CHRNA3-202ENST00000348639 UBE3BQ7Z3V4 1068 aa24.77■■□□□ 1.56
CHRNA3-202ENST00000348639 FOXD4L1Q9NU39 408 aa24.77■■□□□ 1.56
CHRNA3-202ENST00000348639 A0A087WZG4 1122 aa24.76■■□□□ 1.55
CHRNA3-202ENST00000348639 SGSM2O43147 1006 aa24.76■■□□□ 1.55
CHRNA3-202ENST00000348639 IL25Q9H293 177 aa24.76■■□□□ 1.55
CHRNA3-202ENST00000348639 COPRSQ9NQ92 184 aa24.76■■□□□ 1.55
CHRNA3-202ENST00000348639 TOGARAM1Q9Y4F4 1720 aa24.76■■□□□ 1.55
CHRNA3-202ENST00000348639 CASP7P55210 303 aa24.76■■□□□ 1.55
CHRNA3-202ENST00000348639 TTLL7Q6ZT98 887 aa24.75■■□□□ 1.55
CHRNA3-202ENST00000348639 EAF2Q96CJ1 260 aaPredicted RBP24.75■■□□□ 1.55
CHRNA3-202ENST00000348639 ADAMTS2O95450 1211 aa24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 PIGBQ92521 554 aa24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 SIL1Q9H173 461 aa24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 ASAP1Q9ULH1 1129 aa24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 RFX5P48382 616 aaPredicted RBP24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 KLHDC4Q8TBB5 520 aa24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 TNPO1Q92973 898 aaKnown RBP24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 PALD1Q9ULE6 856 aa24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 COL16A1Q07092 1604 aaPredicted RBP24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 COL22A1Q8NFW1 1626 aaPredicted RBP24.74■■□□□ 1.55
CHRNA3-202ENST00000348639 DISP2A7MBM2 1401 aa24.73■■□□□ 1.55
CHRNA3-202ENST00000348639 NEK4P51957 841 aa24.73■■□□□ 1.55
CHRNA3-202ENST00000348639 H7C1W4 665 aa24.72■■□□□ 1.55
CHRNA3-202ENST00000348639 EVI5LQ96CN4 794 aa24.72■■□□□ 1.55
CHRNA3-202ENST00000348639 NUP188Q5SRE5 1749 aa24.72■■□□□ 1.55
CHRNA3-202ENST00000348639 DDX11L8A8MPP1 907 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 EXOC5O00471 708 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 HSPA4P34932 840 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 MCM2P49736 904 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 PTPN12Q05209 780 aaKnown RBP24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 ZBTB3Q9H5J0 574 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 ZNF330Q9Y3S2 320 aaPredicted RBP24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 RAD50Q92878 1312 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 VSIG10Q8N0Z9 540 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 IL27Q8NEV9 243 aa24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 CCDC8Q9H0W5 538 aaPredicted RBP24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 CWC25Q9NXE8 425 aaPredicted RBP24.71■■□□□ 1.55
CHRNA3-202ENST00000348639 RUFY2Q8WXA3 655 aa24.7■■□□□ 1.54
CHRNA3-202ENST00000348639 TEX13AQ9BXU3 409 aaPredicted RBP24.7■■□□□ 1.54
CHRNA3-202ENST00000348639 CWC22Q9HCG8 908 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms