RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 DDX19AQ9NUU7 478 aaKnown RBP17.33■□□□□ 0.37
NUP50-201ENST00000347635 FILIP1Q7Z7B0 1213 aa17.33■□□□□ 0.36
NUP50-201ENST00000347635 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.36
NUP50-201ENST00000347635 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.36
NUP50-201ENST00000347635 FSD2A1L4K1 749 aa17.33■□□□□ 0.36
NUP50-201ENST00000347635 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
NUP50-201ENST00000347635 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
NUP50-201ENST00000347635 IL13P35225 146 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
NUP50-201ENST00000347635 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 CBX1P83916 185 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
NUP50-201ENST00000347635 UNC13BO14795 1591 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 FAM177BA6PVY3 158 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 GCP02774 474 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 GIMAP6Q6P9H5 292 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 CLIP2Q9UDT6 1046 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 NOL7Q9UMY1 257 aaKnown RBP17.32■□□□□ 0.36
NUP50-201ENST00000347635 TTC39AQ5SRH9 613 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 ZMYND15Q9H091 742 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 PRDM10Q9NQV6 1147 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 LMTK3Q96Q04 1460 aa17.32■□□□□ 0.36
NUP50-201ENST00000347635 NOLC1Q14978 699 aaKnown RBP eCLIP17.31■□□□□ 0.36
NUP50-201ENST00000347635 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
NUP50-201ENST00000347635 SERPINC1P01008 464 aa17.31■□□□□ 0.36
NUP50-201ENST00000347635 IP6K1Q92551 441 aa17.31■□□□□ 0.36
NUP50-201ENST00000347635 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
NUP50-201ENST00000347635 CCDC8Q9H0W5 538 aaPredicted RBP17.31■□□□□ 0.36
NUP50-201ENST00000347635 ZSCAN25Q6NSZ9 544 aa17.31■□□□□ 0.36
NUP50-201ENST00000347635 CEP126Q9P2H0 1117 aa17.31■□□□□ 0.36
NUP50-201ENST00000347635 KDM4AO75164 1064 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 F13A1P00488 732 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 CHMLP26374 656 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 CHRNA2Q15822 529 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 ABCC4O15439 1325 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 USP19O94966 1318 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 KIF24Q5T7B8 1368 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 TSPOAP1O95153 1857 aa17.3■□□□□ 0.36
NUP50-201ENST00000347635 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
NUP50-201ENST00000347635 CCDC70Q6NSX1 233 aa17.29■□□□□ 0.36
NUP50-201ENST00000347635 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
NUP50-201ENST00000347635 LMBRD1Q9NUN5 540 aa17.29■□□□□ 0.36
NUP50-201ENST00000347635 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
NUP50-201ENST00000347635 SOS1Q07889 1333 aaPredicted RBP17.29■□□□□ 0.36
NUP50-201ENST00000347635 TET3O43151 1660 aa17.29■□□□□ 0.36
NUP50-201ENST00000347635 ZPR1O75312 459 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 LTKP29376 864 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 PTPN14Q15678 1187 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
NUP50-201ENST00000347635 ANO10Q9NW15 660 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 A0A087WZG4 1122 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 CBFA2T2O43439 604 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 IPO7O95373 1038 aaKnown RBP17.28■□□□□ 0.36
NUP50-201ENST00000347635 ABCC3O15438 1527 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 CTAGE5O15320 804 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 TNNT1P13805 278 aa17.28■□□□□ 0.36
NUP50-201ENST00000347635 GSPT1P15170 499 aaKnown RBP17.28■□□□□ 0.36
NUP50-201ENST00000347635 IGHMBP2P38935 993 aaKnown RBP17.28■□□□□ 0.36
NUP50-201ENST00000347635 C16orf45Q96MC5 204 aaPredicted RBP17.28■□□□□ 0.36
NUP50-201ENST00000347635 CDCA7Q9BWT1 371 aaPredicted RBP17.28■□□□□ 0.36
NUP50-201ENST00000347635 MAP3K2Q9Y2U5 619 aa17.27■□□□□ 0.36
NUP50-201ENST00000347635 SBNO1A3KN83 1393 aa17.27■□□□□ 0.36
NUP50-201ENST00000347635 PPP4R3BQ5MIZ7 849 aa17.27■□□□□ 0.36
NUP50-201ENST00000347635 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.36
NUP50-201ENST00000347635 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.36
NUP50-201ENST00000347635 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
NUP50-201ENST00000347635 CTNNA3Q9UI47 895 aa17.27■□□□□ 0.36
NUP50-201ENST00000347635 SMTNL1A8MU46 457 aa17.27■□□□□ 0.35
NUP50-201ENST00000347635 KIF2AO00139 706 aaPredicted RBP17.27■□□□□ 0.35
NUP50-201ENST00000347635 U3KPZ7 1027 aaPredicted RBP17.26■□□□□ 0.35
NUP50-201ENST00000347635 HMGB1P09429 215 aaKnown RBP17.26■□□□□ 0.35
NUP50-201ENST00000347635 IL2RBP14784 551 aa17.26■□□□□ 0.35
NUP50-201ENST00000347635 AKAP2Q9Y2D5 859 aa17.26■□□□□ 0.35
NUP50-201ENST00000347635 LAMC1P11047 1609 aa17.26■□□□□ 0.35
NUP50-201ENST00000347635 AK2P54819 239 aa17.26■□□□□ 0.35
NUP50-201ENST00000347635 NOC3LQ8WTT2 800 aaKnown RBP17.26■□□□□ 0.35
NUP50-201ENST00000347635 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.26■□□□□ 0.35
NUP50-201ENST00000347635 CGNQ9P2M7 1197 aaKnown RBP17.26■□□□□ 0.35
NUP50-201ENST00000347635 MARCH6O60337 910 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 HOXC9P31274 260 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 ACBD3Q9H3P7 528 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 NEMFO60524 1076 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 XBP1P17861 261 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 SART3Q15020 963 aaKnown RBP17.25■□□□□ 0.35
NUP50-201ENST00000347635 NECAB1Q8N987 351 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 HMG20BQ9P0W2 317 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 DNM1Q05193 864 aaKnown RBP17.25■□□□□ 0.35
NUP50-201ENST00000347635 PCMTD1Q96MG8 357 aaPredicted RBP17.25■□□□□ 0.35
NUP50-201ENST00000347635 DNAJC5Q9H3Z4 198 aa17.25■□□□□ 0.35
NUP50-201ENST00000347635 FKBP4Q02790 459 aaKnown RBP eCLIP17.24■□□□□ 0.35
NUP50-201ENST00000347635 TTC12Q9H892 705 aaPredicted RBP17.24■□□□□ 0.35
NUP50-201ENST00000347635 ZNF165P49910 485 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 FAM200AQ8TCP9 573 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 MYD88Q99836 296 aa17.24■□□□□ 0.35
NUP50-201ENST00000347635 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms