RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 NBPF7P0C2Y1 421 aaPredicted RBP13.76□□□□□ -0.21
ECM1-201ENST00000346569 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
ECM1-201ENST00000346569 PTF1AQ7RTS3 328 aa13.76□□□□□ -0.21
ECM1-201ENST00000346569 GCC1Q96CN9 775 aa13.76□□□□□ -0.21
ECM1-201ENST00000346569 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
ECM1-201ENST00000346569 NEURL1BA8MQ27 555 aa13.75□□□□□ -0.21
ECM1-201ENST00000346569 UBTFL1P0CB47 393 aaPredicted RBP13.75□□□□□ -0.21
ECM1-201ENST00000346569 FAM182BQ5T319 152 aa13.75□□□□□ -0.21
ECM1-201ENST00000346569 BRWD3Q6RI45 1802 aa13.75□□□□□ -0.21
ECM1-201ENST00000346569 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
ECM1-201ENST00000346569 ATP6V1AP38606 617 aa13.74□□□□□ -0.21
ECM1-201ENST00000346569 NUCB1Q02818 461 aa13.74□□□□□ -0.21
ECM1-201ENST00000346569 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
ECM1-201ENST00000346569 ITPK1Q13572 414 aa13.74□□□□□ -0.21
ECM1-201ENST00000346569 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
ECM1-201ENST00000346569 MYD88Q99836 296 aa13.74□□□□□ -0.21
ECM1-201ENST00000346569 LRRFIP2Q9Y608 721 aaKnown RBP13.74□□□□□ -0.21
ECM1-201ENST00000346569 IL6STP40189 918 aaPredicted RBP13.73□□□□□ -0.21
ECM1-201ENST00000346569 GCKRQ14397 625 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 ZBTB1Q9Y2K1 713 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 PNMA6EA0A0J9YXQ4 647 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 GRM8O00222 908 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 EIF5P55010 431 aaKnown RBP13.73□□□□□ -0.21
ECM1-201ENST00000346569 TRIM28Q13263 835 aaKnown RBP13.73□□□□□ -0.21
ECM1-201ENST00000346569 SSH3Q8TE77 659 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 KAZALD1Q96I82 304 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
ECM1-201ENST00000346569 HDAC5Q9UQL6 1122 aa13.73□□□□□ -0.21
ECM1-201ENST00000346569 HMMRO75330 724 aa13.72□□□□□ -0.21
ECM1-201ENST00000346569 PDE4AP27815 886 aa13.72□□□□□ -0.21
ECM1-201ENST00000346569 CRKLP46109 303 aaKnown RBP13.72□□□□□ -0.21
ECM1-201ENST00000346569 MTX1Q13505 466 aa13.72□□□□□ -0.21
ECM1-201ENST00000346569 POLA2Q14181 598 aa13.72□□□□□ -0.21
ECM1-201ENST00000346569 ATP5J2-PTCD1G3V325 749 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 RGS3P49796 1198 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 TCIRG1Q13488 830 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 ANKRD45Q5TZF3 282 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 ISCA1Q9BUE6 129 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.22
ECM1-201ENST00000346569 CCDC87Q9NVE4 849 aa13.71□□□□□ -0.22
ECM1-201ENST00000346569 TJP1Q07157 1748 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 ERVV-1B6SEH8 477 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 H7C1W4 665 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 CASP7P55210 303 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 GIGYF2Q6Y7W6 1299 aaKnown RBP13.7□□□□□ -0.22
ECM1-201ENST00000346569 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 PPP1R42Q7Z4L9 355 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 CCDC191Q8NCU4 936 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 SUCLG2Q96I99 432 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 ZBTB3Q9H5J0 574 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 MAP3K15Q6ZN16 1313 aa13.7□□□□□ -0.22
ECM1-201ENST00000346569 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
ECM1-201ENST00000346569 COL15A1P39059 1388 aa13.69□□□□□ -0.22
ECM1-201ENST00000346569 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
ECM1-201ENST00000346569 RC3H1Q5TC82 1133 aaKnown RBP13.69□□□□□ -0.22
ECM1-201ENST00000346569 HLFQ16534 295 aa13.68□□□□□ -0.22
ECM1-201ENST00000346569 LINC00116Q8NCU8 138 aa13.68□□□□□ -0.22
ECM1-201ENST00000346569 NHSQ6T4R5 1651 aa13.68□□□□□ -0.22
ECM1-201ENST00000346569 A0A087WZG4 1122 aa13.67□□□□□ -0.22
ECM1-201ENST00000346569 KIF6Q6ZMV9 814 aa13.67□□□□□ -0.22
ECM1-201ENST00000346569 CCDC125Q86Z20 511 aa13.67□□□□□ -0.22
ECM1-201ENST00000346569 LNPKQ9C0E8 428 aa13.67□□□□□ -0.22
ECM1-201ENST00000346569 CWC25Q9NXE8 425 aaPredicted RBP13.67□□□□□ -0.22
ECM1-201ENST00000346569 SBF2Q86WG5 1849 aa13.66□□□□□ -0.22
ECM1-201ENST00000346569 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
ECM1-201ENST00000346569 EPHA10Q5JZY3 1008 aa13.66□□□□□ -0.22
ECM1-201ENST00000346569 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
ECM1-201ENST00000346569 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
ECM1-201ENST00000346569 NOP58Q9Y2X3 529 aaKnown RBP13.66□□□□□ -0.22
ECM1-201ENST00000346569 ZNF330Q9Y3S2 320 aaPredicted RBP13.66□□□□□ -0.22
ECM1-201ENST00000346569 MYH14Q7Z406 1995 aaKnown RBP13.66□□□□□ -0.22
ECM1-201ENST00000346569 NUP188Q5SRE5 1749 aa13.66□□□□□ -0.22
ECM1-201ENST00000346569 RREB1Q92766 1687 aa13.66□□□□□ -0.22
ECM1-201ENST00000346569 CNTNAP4Q9C0A0 1308 aa13.66□□□□□ -0.22
ECM1-201ENST00000346569 SRGAP3O43295 1099 aa13.65□□□□□ -0.22
ECM1-201ENST00000346569 KCNQ4P56696 695 aa13.65□□□□□ -0.22
ECM1-201ENST00000346569 RABL6Q3YEC7 729 aaPredicted RBP13.65□□□□□ -0.22
ECM1-201ENST00000346569 HSP90AB3PQ58FF7 597 aa13.65□□□□□ -0.22
ECM1-201ENST00000346569 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
ECM1-201ENST00000346569 JARID2Q92833 1246 aaPredicted RBP13.65□□□□□ -0.22
ECM1-201ENST00000346569 BACH2Q9BYV9 841 aa13.65□□□□□ -0.22
ECM1-201ENST00000346569 TBC1D2BQ9UPU7 963 aa13.65□□□□□ -0.22
ECM1-201ENST00000346569 BTAF1O14981 1849 aa13.65□□□□□ -0.22
ECM1-201ENST00000346569 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 UBE3BQ7Z3V4 1068 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 EXOC6BQ9Y2D4 811 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 PCCAP05165 728 aaPredicted RBP13.64□□□□□ -0.23
ECM1-201ENST00000346569 FOXO4P98177 505 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 NPM2Q86SE8 214 aaKnown RBP13.64□□□□□ -0.23
ECM1-201ENST00000346569 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 C16orf71Q8IYS4 520 aaPredicted RBP13.64□□□□□ -0.23
ECM1-201ENST00000346569 ARXQ96QS3 562 aa13.64□□□□□ -0.23
ECM1-201ENST00000346569 CCNL1Q9UK58 526 aaPredicted RBP13.64□□□□□ -0.23
ECM1-201ENST00000346569 SMARCA5O60264 1052 aaPredicted RBP13.63□□□□□ -0.23
ECM1-201ENST00000346569 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms