RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 TPTE2Q6XPS3 522 aa16.45■□□□□ 0.22
CSNK1G3-201ENST00000345990 KRT32Q14532 448 aa16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 BMP2KLQ5H9B9 411 aa16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 FBXW7Q969H0 707 aa16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 NUCB1Q02818 461 aa16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 LDHAL6AQ6ZMR3 332 aa16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 NLRP3Q96P20 1036 aa16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
CSNK1G3-201ENST00000345990 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
CSNK1G3-201ENST00000345990 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
CSNK1G3-201ENST00000345990 UQCRFS1P1P0C7P4 283 aa16.43■□□□□ 0.22
CSNK1G3-201ENST00000345990 ANKRD1Q15327 319 aa16.43■□□□□ 0.22
CSNK1G3-201ENST00000345990 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 CPLX1O14810 134 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 NBPF14Q5TI25 921 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 SPRYD3Q8NCJ5 442 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 SIGLEC1Q9BZZ2 1709 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 ZBTB7BO15156 539 aaPredicted RBP16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 EVI5LQ96CN4 794 aa16.42■□□□□ 0.22
CSNK1G3-201ENST00000345990 VSIG10Q8N0Z9 540 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 NUCB2P80303 420 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 MST1RQ04912 1400 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 SMC5Q8IY18 1101 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 FLAD1Q8NFF5 587 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 PDIA4P13667 645 aaKnown RBP16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 CEP85Q6P2H3 762 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 CRB1P82279 1406 aa16.41■□□□□ 0.22
CSNK1G3-201ENST00000345990 H3BQV1 296 aa16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 IFFO2Q5TF58 517 aa16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 FKBP4Q02790 459 aaKnown RBP eCLIP16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 PCDHB15Q9Y5E8 787 aa16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 ABCC4O15439 1325 aa16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 FAM196AQ6ZSG2 479 aa16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 CPDO75976 1380 aa16.4■□□□□ 0.22
CSNK1G3-201ENST00000345990 DDX11L8A8MPP1 907 aa16.39■□□□□ 0.22
CSNK1G3-201ENST00000345990 TRIM29Q14134 588 aa16.39■□□□□ 0.22
CSNK1G3-201ENST00000345990 ANKRD18AQ8IVF6 992 aa16.39■□□□□ 0.22
CSNK1G3-201ENST00000345990 MAP3K12Q12852 859 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 KLHL34Q8N239 644 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 CHMP5Q9NZZ3 219 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 IFT172Q9UG01 1749 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 DNAJC10Q8IXB1 793 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 QTRT2Q9H974 415 aaKnown RBP16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 RLBP1P12271 317 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 KDRP35968 1356 aa16.39■□□□□ 0.21
CSNK1G3-201ENST00000345990 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
CSNK1G3-201ENST00000345990 TTC41PQ6P2S7 1318 aa16.38■□□□□ 0.21
CSNK1G3-201ENST00000345990 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
CSNK1G3-201ENST00000345990 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
CSNK1G3-201ENST00000345990 NOL8Q76FK4 1167 aaKnown RBP16.38■□□□□ 0.21
CSNK1G3-201ENST00000345990 G2E3Q7L622 706 aa16.38■□□□□ 0.21
CSNK1G3-201ENST00000345990 CCDC85AQ96PX6 553 aaPredicted RBP16.37■□□□□ 0.21
CSNK1G3-201ENST00000345990 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
CSNK1G3-201ENST00000345990 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
CSNK1G3-201ENST00000345990 GNPATO15228 680 aa16.37■□□□□ 0.21
CSNK1G3-201ENST00000345990 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
CSNK1G3-201ENST00000345990 SMC3Q9UQE7 1217 aa16.37■□□□□ 0.21
CSNK1G3-201ENST00000345990 CYP46A1Q9Y6A2 500 aa16.37■□□□□ 0.21
CSNK1G3-201ENST00000345990 SPTY2D1Q68D10 685 aaPredicted RBP16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 ANKIB1Q9P2G1 1089 aa16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 IGHDP01880 384 aa16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 STK32BQ9NY57 414 aa16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 PDCP20941 246 aa16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 RAI14Q9P0K7 980 aa16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
CSNK1G3-201ENST00000345990 PHF14O94880 888 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 LDHCP07864 332 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 SKOR2Q2VWA4 1001 aaPredicted RBP16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 TTC22Q5TAA0 569 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 TAOK2Q9UL54 1235 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 KAT6BQ8WYB5 2073 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 ZNF287Q9HBT7 754 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 AXIN2Q9Y2T1 843 aa16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 SMARCA5O60264 1052 aaPredicted RBP16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 IL6STP40189 918 aaPredicted RBP16.35■□□□□ 0.21
CSNK1G3-201ENST00000345990 TCIRG1Q13488 830 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 CWF19L2Q2TBE0 894 aaKnown RBP16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 PLEKHG2Q9H7P9 1386 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 PDE8AO60658 829 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 GCKRQ14397 625 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 ZSCAN31Q96LW9 406 aaPredicted RBP16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 A1BGP04217 495 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 HEG1Q9ULI3 1381 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 LRRC7Q96NW7 1537 aa16.34■□□□□ 0.21
CSNK1G3-201ENST00000345990 GOLGA6L6A8MZA4 724 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms