RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 NBPF4Q96M43 638 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 BRMS1Q9HCU9 246 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 LIMD1Q9UGP4 676 aa10.53□□□□□ -0.72
SP140-201ENST00000343805 ATP2B3Q16720 1220 aa10.52□□□□□ -0.72
SP140-201ENST00000343805 HDGFL1Q5TGJ6 251 aa10.52□□□□□ -0.72
SP140-201ENST00000343805 CCDC125Q86Z20 511 aa10.52□□□□□ -0.72
SP140-201ENST00000343805 MSNP26038 577 aaKnown RBP10.52□□□□□ -0.73
SP140-201ENST00000343805 SSR1P43307 286 aaKnown RBP10.52□□□□□ -0.73
SP140-201ENST00000343805 SLC4A10Q6U841 1118 aa10.52□□□□□ -0.73
SP140-201ENST00000343805 ZNF771Q7L3S4 317 aaPredicted RBP10.52□□□□□ -0.73
SP140-201ENST00000343805 PPIP5K1Q6PFW1 1433 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 LRRC7Q96NW7 1537 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 KIF1CO43896 1103 aaKnown RBP10.51□□□□□ -0.73
SP140-201ENST00000343805 GTF2F1P35269 517 aaKnown RBP eCLIP10.51□□□□□ -0.73
SP140-201ENST00000343805 NOP2P46087 812 aaKnown RBP10.51□□□□□ -0.73
SP140-201ENST00000343805 TBC1D9Q6ZT07 1266 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 UPF1Q92900 1129 aaKnown RBP eCLIP10.51□□□□□ -0.73
SP140-201ENST00000343805 DONSONQ9NYP3 566 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 NEO1Q92859 1461 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 HSP90AB2PQ58FF8 381 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 OTUD7AQ8TE49 926 aaPredicted RBP10.51□□□□□ -0.73
SP140-201ENST00000343805 METP08581 1390 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 PNPLA6Q8IY17 1366 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 ADGRB2O60241 1585 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 SSTR3P32745 418 aaPredicted RBP10.51□□□□□ -0.73
SP140-201ENST00000343805 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
SP140-201ENST00000343805 ALKQ9UM73 1620 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 MCM5P33992 734 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 ZBTB9Q96C00 473 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 IFT57Q9NWB7 429 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 USP32Q8NFA0 1604 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 TMEM88BA6NKF7 163 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 FOXO3O43524 673 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 ZNF526Q8TF50 670 aaPredicted RBP10.5□□□□□ -0.73
SP140-201ENST00000343805 FEZ1Q99689 392 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 FEZ2Q9UHY8 353 aaPredicted RBP10.5□□□□□ -0.73
SP140-201ENST00000343805 ARHGEF40Q8TER5 1519 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 RIMS2Q9UQ26 1411 aa10.5□□□□□ -0.73
SP140-201ENST00000343805 CFAP74Q9C0B2 1584 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 NUTM2GQ5VZR2 741 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 MAP2P11137 1827 aaKnown RBP10.49□□□□□ -0.73
SP140-201ENST00000343805 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 MPNDQ8N594 471 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 MYRIPQ8NFW9 859 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 AMOTL2Q9Y2J4 779 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 ZFYVE9O95405 1425 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 FAM135BQ49AJ0 1406 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 TMEM131LA2VDJ0 1609 aa10.49□□□□□ -0.73
SP140-201ENST00000343805 F6X3S4 739 aa10.48□□□□□ -0.73
SP140-201ENST00000343805 QPCTQ16769 361 aa10.48□□□□□ -0.73
SP140-201ENST00000343805 BMP2KLQ5H9B9 411 aa10.48□□□□□ -0.73
SP140-201ENST00000343805 TNPO1Q92973 898 aaKnown RBP10.48□□□□□ -0.73
SP140-201ENST00000343805 GCC1Q96CN9 775 aa10.48□□□□□ -0.73
SP140-201ENST00000343805 SGSM3Q96HU1 749 aa10.48□□□□□ -0.73
SP140-201ENST00000343805 GTF2A1P52655 376 aaPredicted RBP10.48□□□□□ -0.73
SP140-201ENST00000343805 EIF4A2Q14240 407 aaKnown RBP10.48□□□□□ -0.73
SP140-201ENST00000343805 NOL7Q9UMY1 257 aaKnown RBP10.48□□□□□ -0.73
SP140-201ENST00000343805 RICTORQ6R327 1708 aa10.48□□□□□ -0.73
SP140-201ENST00000343805 CREBRFQ8IUR6 639 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 BORCS6Q96GS4 357 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 CEBPAP49715 358 aaPredicted RBP10.47□□□□□ -0.73
SP140-201ENST00000343805 TSHZ3Q63HK5 1081 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 GIMAP6Q6P9H5 292 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 API5Q9BZZ5 524 aaKnown RBP10.47□□□□□ -0.73
SP140-201ENST00000343805 PRR36Q9H6K5 1346 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 PREX1Q8TCU6 1659 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 MAP3K13O43283 966 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 TBC1D12O60347 775 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 SLFN14P0C7P3 912 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 GSPT1P15170 499 aaKnown RBP10.47□□□□□ -0.73
SP140-201ENST00000343805 MEIS3Q99687 375 aa10.47□□□□□ -0.73
SP140-201ENST00000343805 ZNF853P0CG23 659 aa10.46□□□□□ -0.73
SP140-201ENST00000343805 GUCY2CP25092 1073 aa10.46□□□□□ -0.73
SP140-201ENST00000343805 LTV1Q96GA3 475 aaPredicted RBP10.46□□□□□ -0.73
SP140-201ENST00000343805 KIF2CQ99661 725 aa10.46□□□□□ -0.73
SP140-201ENST00000343805 ZNF16P17020 682 aaPredicted RBP10.46□□□□□ -0.74
SP140-201ENST00000343805 CCDC96Q2M329 555 aa10.46□□□□□ -0.74
SP140-201ENST00000343805 MED4Q9NPJ6 270 aa10.46□□□□□ -0.74
SP140-201ENST00000343805 ACEP12821 1306 aa10.46□□□□□ -0.74
SP140-201ENST00000343805 PTGDRQ13258 359 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 HIC1Q14526 733 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 ICE2Q659A1 982 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 MNS1Q8NEH6 495 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 GAS2L2Q8NHY3 880 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 ITFG2Q969R8 447 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 SSFA2P28290 1259 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 ARID4AP29374 1257 aaPredicted RBP10.45□□□□□ -0.74
SP140-201ENST00000343805 G2E3Q7L622 706 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 PLEKHM2Q8IWE5 1019 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 ARHGAP45Q92619 1136 aa10.45□□□□□ -0.74
SP140-201ENST00000343805 A2ML1A8K2U0 1454 aa10.44□□□□□ -0.74
SP140-201ENST00000343805 ABCC4O15439 1325 aa10.44□□□□□ -0.74
SP140-201ENST00000343805 CDC45O75419 566 aa10.44□□□□□ -0.74
SP140-201ENST00000343805 KCNA1Q09470 495 aa10.44□□□□□ -0.74
SP140-201ENST00000343805 C9orf131Q5VYM1 1079 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms