RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 NGLY1Q96IV0 654 aa15.97■□□□□ 0.15
TMEM248-201ENST00000341567 TNMDQ9H2S6 317 aa15.97■□□□□ 0.15
TMEM248-201ENST00000341567 ZMYM4Q5VZL5 1548 aa15.97■□□□□ 0.15
TMEM248-201ENST00000341567 GRM8O00222 908 aa15.97■□□□□ 0.15
TMEM248-201ENST00000341567 IL17REQ8NFR9 667 aa15.97■□□□□ 0.15
TMEM248-201ENST00000341567 ZCRB1Q8TBF4 217 aaKnown RBP15.97■□□□□ 0.15
TMEM248-201ENST00000341567 SLC4A8Q2Y0W8 1093 aa15.97■□□□□ 0.15
TMEM248-201ENST00000341567 ZFYVE16Q7Z3T8 1539 aa15.97■□□□□ 0.15
TMEM248-201ENST00000341567 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.15
TMEM248-201ENST00000341567 LDHAL6AQ6ZMR3 332 aa15.96■□□□□ 0.15
TMEM248-201ENST00000341567 PLEKHF1Q96S99 279 aa15.96■□□□□ 0.15
TMEM248-201ENST00000341567 LRP2BPQ9P2M1 347 aa15.96■□□□□ 0.15
TMEM248-201ENST00000341567 HCLS1P14317 486 aaPredicted RBP15.96■□□□□ 0.15
TMEM248-201ENST00000341567 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
TMEM248-201ENST00000341567 ME1P48163 572 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 EDC4Q6P2E9 1401 aaKnown RBP15.95■□□□□ 0.14
TMEM248-201ENST00000341567 PDCL2Q8N4E4 241 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 MNS1Q8NEH6 495 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 RAI14Q9P0K7 980 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 USP19O94966 1318 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 SPDYE4A6NLX3 237 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 KSR2Q6VAB6 950 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 BCORL1Q5H9F3 1711 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 KRT85P78386 507 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 CCDC112Q8NEF3 446 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 LETM1O95202 739 aaPredicted RBP15.95■□□□□ 0.14
TMEM248-201ENST00000341567 PDCP20941 246 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 HELBQ8NG08 1087 aaPredicted RBP15.95■□□□□ 0.14
TMEM248-201ENST00000341567 ZNF521Q96K83 1311 aa15.95■□□□□ 0.14
TMEM248-201ENST00000341567 RAB3GAP1Q15042 981 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 CKAP2LQ8IYA6 745 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 GLI2P10070 1586 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 SMC2O95347 1197 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 PDE4CQ08493 712 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 ROBO2Q9HCK4 1378 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 TSPOAP1O95153 1857 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 RNMTO43148 476 aaKnown RBP15.94■□□□□ 0.14
TMEM248-201ENST00000341567 KINO60870 393 aaKnown RBP15.94■□□□□ 0.14
TMEM248-201ENST00000341567 TMX3Q96JJ7 454 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 TTC12Q9H892 705 aaPredicted RBP15.94■□□□□ 0.14
TMEM248-201ENST00000341567 MAP3K5Q99683 1374 aa15.94■□□□□ 0.14
TMEM248-201ENST00000341567 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
TMEM248-201ENST00000341567 TDO2P48775 406 aa15.93■□□□□ 0.14
TMEM248-201ENST00000341567 SAFBQ15424 915 aaKnown RBP eCLIP15.93■□□□□ 0.14
TMEM248-201ENST00000341567 STK38Q15208 465 aa15.93■□□□□ 0.14
TMEM248-201ENST00000341567 FAM177A1Q8N128 213 aaPredicted RBP15.93■□□□□ 0.14
TMEM248-201ENST00000341567 CCDC34Q96HJ3 373 aa15.93■□□□□ 0.14
TMEM248-201ENST00000341567 MLH3Q9UHC1 1453 aa15.93■□□□□ 0.14
TMEM248-201ENST00000341567 PLEKHG3A1L390 1219 aa15.93■□□□□ 0.14
TMEM248-201ENST00000341567 GOLGA6L1Q8N7Z2 621 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 ADCY5O95622 1261 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 ATP2B2Q01814 1243 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 CCDC144CPQ8IYA2 1237 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 NUP62CLQ9H1M0 184 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 CWC25Q9NXE8 425 aaPredicted RBP15.92■□□□□ 0.14
TMEM248-201ENST00000341567 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
TMEM248-201ENST00000341567 A1BGP04217 495 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.92■□□□□ 0.14
TMEM248-201ENST00000341567 KDM5DQ9BY66 1539 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 DIP2BQ9P265 1576 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 PDILTQ8N807 584 aa15.92■□□□□ 0.14
TMEM248-201ENST00000341567 C16orf45Q96MC5 204 aaPredicted RBP15.92■□□□□ 0.14
TMEM248-201ENST00000341567 TPM3P06753 285 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 CHST3Q7LGC8 479 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 AMOTL1Q8IY63 956 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 TRMT2AQ8IZ69 625 aaKnown RBP15.91■□□□□ 0.14
TMEM248-201ENST00000341567 BICC1Q9H694 974 aaKnown RBP15.91■□□□□ 0.14
TMEM248-201ENST00000341567 ZFYVE9O95405 1425 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 SNX21Q969T3 373 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 AIDAQ96BJ3 306 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 SPATA32Q96LK8 384 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 TIMM10P62072 90 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 GIMAP6Q6P9H5 292 aa15.91■□□□□ 0.14
TMEM248-201ENST00000341567 IGSF3O75054 1194 aa15.9■□□□□ 0.14
TMEM248-201ENST00000341567 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
TMEM248-201ENST00000341567 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
TMEM248-201ENST00000341567 ERICH4A6NGS2 130 aa15.9■□□□□ 0.14
TMEM248-201ENST00000341567 TTLL5Q6EMB2 1281 aa15.9■□□□□ 0.14
TMEM248-201ENST00000341567 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.14
TMEM248-201ENST00000341567 ZNF790Q6PG37 636 aa15.89■□□□□ 0.14
TMEM248-201ENST00000341567 LIMCH1Q9UPQ0 1083 aa15.89■□□□□ 0.14
TMEM248-201ENST00000341567 HECW2Q9P2P5 1572 aa15.89■□□□□ 0.13
TMEM248-201ENST00000341567 SBNO2Q9Y2G9 1366 aa15.89■□□□□ 0.13
TMEM248-201ENST00000341567 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
TMEM248-201ENST00000341567 IGHMBP2P38935 993 aaKnown RBP15.89■□□□□ 0.13
TMEM248-201ENST00000341567 SART3Q15020 963 aaKnown RBP15.89■□□□□ 0.13
TMEM248-201ENST00000341567 LRSAM1Q6UWE0 723 aa15.89■□□□□ 0.13
TMEM248-201ENST00000341567 GAS2L3Q86XJ1 694 aa15.89■□□□□ 0.13
TMEM248-201ENST00000341567 EVI5LQ96CN4 794 aa15.89■□□□□ 0.13
TMEM248-201ENST00000341567 EDC3Q96F86 508 aaKnown RBP15.89■□□□□ 0.13
TMEM248-201ENST00000341567 CHAMP1Q96JM3 812 aa15.89■□□□□ 0.13
TMEM248-201ENST00000341567 SBNO1A3KN83 1393 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 CCDC183Q5T5S1 534 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 RBSNQ9H1K0 784 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 BTG4Q9NY30 223 aa15.88■□□□□ 0.13
TMEM248-201ENST00000341567 INO80Q9ULG1 1556 aaPredicted RBP15.88■□□□□ 0.13
TMEM248-201ENST00000341567 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
TMEM248-201ENST00000341567 ZKSCAN5Q9Y2L8 839 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms