RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 GAS2L3Q86XJ1 694 aa24.46■■□□□ 1.51
SPG7-202ENST00000341316 BICC1Q9H694 974 aaKnown RBP24.46■■□□□ 1.51
SPG7-202ENST00000341316 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.46■■□□□ 1.51
SPG7-202ENST00000341316 IL17RAQ96F46 866 aa24.45■■□□□ 1.5
SPG7-202ENST00000341316 TMX3Q96JJ7 454 aa24.45■■□□□ 1.5
SPG7-202ENST00000341316 CWC22Q9HCG8 908 aaKnown RBP24.45■■□□□ 1.5
SPG7-202ENST00000341316 NUCB2P80303 420 aa24.45■■□□□ 1.5
SPG7-202ENST00000341316 XAGE3Q8WTP9 111 aa24.45■■□□□ 1.5
SPG7-202ENST00000341316 USP16Q9Y5T5 823 aa24.45■■□□□ 1.5
SPG7-202ENST00000341316 PTMSP20962 102 aa24.44■■□□□ 1.5
SPG7-202ENST00000341316 RIC3Q7Z5B4 369 aa24.44■■□□□ 1.5
SPG7-202ENST00000341316 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
SPG7-202ENST00000341316 ZDHHC9Q9Y397 364 aa24.44■■□□□ 1.5
SPG7-202ENST00000341316 SGSM2O43147 1006 aa24.44■■□□□ 1.5
SPG7-202ENST00000341316 PIP4K2AP48426 406 aaPredicted RBP24.44■■□□□ 1.5
SPG7-202ENST00000341316 COPS6Q7L5N1 327 aa24.44■■□□□ 1.5
SPG7-202ENST00000341316 DCAF5Q96JK2 942 aa24.44■■□□□ 1.5
SPG7-202ENST00000341316 ABCC6O95255 1503 aa24.43■■□□□ 1.5
SPG7-202ENST00000341316 CLCN1P35523 988 aa24.43■■□□□ 1.5
SPG7-202ENST00000341316 LRP10Q7Z4F1 713 aa24.43■■□□□ 1.5
SPG7-202ENST00000341316 CNTROBQ8N137 903 aa24.43■■□□□ 1.5
SPG7-202ENST00000341316 CLASRPQ8N2M8 674 aaKnown RBP24.43■■□□□ 1.5
SPG7-202ENST00000341316 TTC41PQ6P2S7 1318 aa24.42■■□□□ 1.5
SPG7-202ENST00000341316 HSPA4P34932 840 aa24.42■■□□□ 1.5
SPG7-202ENST00000341316 UPF3BQ9BZI7 483 aaKnown RBP24.42■■□□□ 1.5
SPG7-202ENST00000341316 MRC1P22897 1456 aa24.42■■□□□ 1.5
SPG7-202ENST00000341316 CPDO75976 1380 aa24.41■■□□□ 1.5
SPG7-202ENST00000341316 NEURL1BA8MQ27 555 aa24.41■■□□□ 1.5
SPG7-202ENST00000341316 GLRX3O76003 335 aaKnown RBP24.41■■□□□ 1.5
SPG7-202ENST00000341316 SASH1O94885 1247 aa24.41■■□□□ 1.5
SPG7-202ENST00000341316 LARP1Q6PKG0 1096 aaKnown RBP24.41■■□□□ 1.5
SPG7-202ENST00000341316 NOL8Q76FK4 1167 aaKnown RBP24.4■■□□□ 1.5
SPG7-202ENST00000341316 HDAC5Q9UQL6 1122 aa24.4■■□□□ 1.5
SPG7-202ENST00000341316 BRINP3Q76B58 766 aa24.4■■□□□ 1.5
SPG7-202ENST00000341316 LSG1Q9H089 658 aaKnown RBP24.4■■□□□ 1.5
SPG7-202ENST00000341316 RAD50Q92878 1312 aa24.39■■□□□ 1.5
SPG7-202ENST00000341316 SNRPA1P09661 255 aaKnown RBP24.39■■□□□ 1.5
SPG7-202ENST00000341316 CWC27Q6UX04 472 aaKnown RBP24.39■■□□□ 1.5
SPG7-202ENST00000341316 ERC1Q8IUD2 1116 aa24.39■■□□□ 1.5
SPG7-202ENST00000341316 MYD88Q99836 296 aa24.39■■□□□ 1.5
SPG7-202ENST00000341316 ECHDC1Q9NTX5 307 aa24.39■■□□□ 1.5
SPG7-202ENST00000341316 PKD1L3Q7Z443 1732 aa24.39■■□□□ 1.49
SPG7-202ENST00000341316 EPB41L2O43491 1005 aaKnown RBP24.38■■□□□ 1.49
SPG7-202ENST00000341316 MCM2P49736 904 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 GCKRQ14397 625 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 EPHA10Q5JZY3 1008 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 MCTP1Q6DN14 999 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 METTL22Q9BUU2 404 aaPredicted RBP24.38■■□□□ 1.49
SPG7-202ENST00000341316 IFIT2P09913 472 aaKnown RBP24.38■■□□□ 1.49
SPG7-202ENST00000341316 CUL4AQ13619 759 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 AACSQ86V21 672 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 KLHDC4Q8TBB5 520 aa24.38■■□□□ 1.49
SPG7-202ENST00000341316 GOLGA6L22H0YM25 854 aa24.37■■□□□ 1.49
SPG7-202ENST00000341316 XIRP1Q702N8 1843 aaKnown RBP24.37■■□□□ 1.49
SPG7-202ENST00000341316 EAF2Q96CJ1 260 aaPredicted RBP24.37■■□□□ 1.49
SPG7-202ENST00000341316 NEXNQ0ZGT2 675 aa24.36■■□□□ 1.49
SPG7-202ENST00000341316 ANKRD13DQ6ZTN6 518 aa24.36■■□□□ 1.49
SPG7-202ENST00000341316 JARID2Q92833 1246 aaPredicted RBP24.36■■□□□ 1.49
SPG7-202ENST00000341316 CHAMP1Q96JM3 812 aa24.36■■□□□ 1.49
SPG7-202ENST00000341316 FMNL2Q96PY5 1086 aa24.36■■□□□ 1.49
SPG7-202ENST00000341316 CABP4P57796 275 aa24.36■■□□□ 1.49
SPG7-202ENST00000341316 SIL1Q9H173 461 aa24.36■■□□□ 1.49
SPG7-202ENST00000341316 RASEFQ8IZ41 740 aa24.35■■□□□ 1.49
SPG7-202ENST00000341316 PLEKHG2Q9H7P9 1386 aa24.35■■□□□ 1.49
SPG7-202ENST00000341316 LMBRD1Q9NUN5 540 aa24.35■■□□□ 1.49
SPG7-202ENST00000341316 TLR7Q9NYK1 1049 aaKnown RBP24.35■■□□□ 1.49
SPG7-202ENST00000341316 SNX14Q9Y5W7 946 aa24.35■■□□□ 1.49
SPG7-202ENST00000341316 G3BP1Q13283 466 aaKnown RBP eCLIP24.34■■□□□ 1.49
SPG7-202ENST00000341316 CCDC8Q9H0W5 538 aaPredicted RBP24.34■■□□□ 1.49
SPG7-202ENST00000341316 ERBB4Q15303 1308 aa24.34■■□□□ 1.49
SPG7-202ENST00000341316 GLI3P10071 1580 aa24.34■■□□□ 1.49
SPG7-202ENST00000341316 ESPNB1AK53 854 aa24.33■■□□□ 1.49
SPG7-202ENST00000341316 KLHL40Q2TBA0 621 aa24.33■■□□□ 1.49
SPG7-202ENST00000341316 NAP1L5Q96NT1 182 aaPredicted RBP24.33■■□□□ 1.49
SPG7-202ENST00000341316 DDX49Q9Y6V7 483 aaKnown RBP24.33■■□□□ 1.49
SPG7-202ENST00000341316 FOXD4L5Q5VV16 416 aaPredicted RBP24.32■■□□□ 1.48
SPG7-202ENST00000341316 FOXD4L4Q8WXT5 416 aaPredicted RBP24.32■■□□□ 1.48
SPG7-202ENST00000341316 GPATCH3Q96I76 525 aa24.32■■□□□ 1.48
SPG7-202ENST00000341316 DIAPH3Q9NSV4 1193 aa24.32■■□□□ 1.48
SPG7-202ENST00000341316 PTH1RQ03431 593 aa24.31■■□□□ 1.48
SPG7-202ENST00000341316 PRDM11Q9NQV5 511 aa24.31■■□□□ 1.48
SPG7-202ENST00000341316 TRIM44Q96DX7 344 aaPredicted RBP24.31■■□□□ 1.48
SPG7-202ENST00000341316 INTS4Q96HW7 963 aaKnown RBP24.31■■□□□ 1.48
SPG7-202ENST00000341316 KIAA1211Q6ZU35 1233 aa24.3■■□□□ 1.48
SPG7-202ENST00000341316 ATP5J2-PTCD1G3V325 749 aa24.3■■□□□ 1.48
SPG7-202ENST00000341316 PTCD1O75127 700 aaKnown RBP24.3■■□□□ 1.48
SPG7-202ENST00000341316 WDR17Q8IZU2 1322 aa24.3■■□□□ 1.48
SPG7-202ENST00000341316 EVI5LQ96CN4 794 aa24.3■■□□□ 1.48
SPG7-202ENST00000341316 TOM1L2Q6ZVM7 507 aa24.29■■□□□ 1.48
SPG7-202ENST00000341316 TTC14Q96N46 770 aa24.29■■□□□ 1.48
SPG7-202ENST00000341316 BRD1O95696 1058 aa24.28■■□□□ 1.48
SPG7-202ENST00000341316 UBE3BQ7Z3V4 1068 aa24.28■■□□□ 1.48
SPG7-202ENST00000341316 NBPF26B4DH59 902 aa24.27■■□□□ 1.48
SPG7-202ENST00000341316 PRPF40AO75400 957 aaKnown RBP24.27■■□□□ 1.48
SPG7-202ENST00000341316 RFX5P48382 616 aaPredicted RBP24.27■■□□□ 1.48
SPG7-202ENST00000341316 NBPF14Q5TI25 921 aa24.27■■□□□ 1.48
SPG7-202ENST00000341316 NBPF10Q6P3W6 841 aaKnown RBP24.27■■□□□ 1.48
SPG7-202ENST00000341316 NBPF15Q8N660 670 aa24.27■■□□□ 1.48
SPG7-202ENST00000341316 SOS2Q07890 1332 aaPredicted RBP24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms