RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 KIF2CQ99661 725 aa16.58■□□□□ 0.24
TRIM60-201ENST00000341062 PALLDQ8WX93 1383 aa16.58■□□□□ 0.24
TRIM60-201ENST00000341062 MYH14Q7Z406 1995 aaKnown RBP16.58■□□□□ 0.24
TRIM60-201ENST00000341062 GNAI2P04899 355 aa16.57■□□□□ 0.24
TRIM60-201ENST00000341062 GNAI3P08754 354 aa16.57■□□□□ 0.24
TRIM60-201ENST00000341062 HOXB7P09629 217 aa16.57■□□□□ 0.24
TRIM60-201ENST00000341062 SLC4A10Q6U841 1118 aa16.57■□□□□ 0.24
TRIM60-201ENST00000341062 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
TRIM60-201ENST00000341062 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
TRIM60-201ENST00000341062 BCL11AQ9H165 835 aa16.57■□□□□ 0.24
TRIM60-201ENST00000341062 LY75O60449 1722 aa16.57■□□□□ 0.24
TRIM60-201ENST00000341062 EIF2S2P20042 333 aaKnown RBP16.56■□□□□ 0.24
TRIM60-201ENST00000341062 ITPK1Q13572 414 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 PROSER3Q2NL68 480 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 ILDR2Q71H61 639 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 CHMP4AQ9BY43 222 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 CHMP5Q9NZZ3 219 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 FKBP5Q13451 457 aaPredicted RBP16.56■□□□□ 0.24
TRIM60-201ENST00000341062 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 DNAJC10Q8IXB1 793 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
TRIM60-201ENST00000341062 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
TRIM60-201ENST00000341062 DDIT3P35638 169 aa16.54■□□□□ 0.24
TRIM60-201ENST00000341062 C16orf71Q8IYS4 520 aaPredicted RBP16.54■□□□□ 0.24
TRIM60-201ENST00000341062 PROM2Q8N271 834 aa16.54■□□□□ 0.24
TRIM60-201ENST00000341062 LRRC4BQ9NT99 713 aa16.54■□□□□ 0.24
TRIM60-201ENST00000341062 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
TRIM60-201ENST00000341062 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
TRIM60-201ENST00000341062 SIK1P57059 783 aa16.54■□□□□ 0.24
TRIM60-201ENST00000341062 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
TRIM60-201ENST00000341062 A1BGP04217 495 aa16.53■□□□□ 0.24
TRIM60-201ENST00000341062 OTUD7AQ8TE49 926 aaPredicted RBP16.53■□□□□ 0.24
TRIM60-201ENST00000341062 COL5A3P25940 1745 aaPredicted RBP16.53■□□□□ 0.24
TRIM60-201ENST00000341062 PDIA6Q15084 440 aa16.52■□□□□ 0.24
TRIM60-201ENST00000341062 HDGFL1Q5TGJ6 251 aa16.52■□□□□ 0.24
TRIM60-201ENST00000341062 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
TRIM60-201ENST00000341062 SNRPA1P09661 255 aaKnown RBP16.52■□□□□ 0.23
TRIM60-201ENST00000341062 ATP8B2P98198 1209 aa16.52■□□□□ 0.23
TRIM60-201ENST00000341062 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.23
TRIM60-201ENST00000341062 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.23
TRIM60-201ENST00000341062 CIZ1Q9ULV3 898 aaPredicted RBP16.52■□□□□ 0.23
TRIM60-201ENST00000341062 NBPF26B4DH59 902 aa16.51■□□□□ 0.23
TRIM60-201ENST00000341062 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
TRIM60-201ENST00000341062 APBA3O96018 575 aa16.51■□□□□ 0.23
TRIM60-201ENST00000341062 SDSP20132 328 aa16.51■□□□□ 0.23
TRIM60-201ENST00000341062 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
TRIM60-201ENST00000341062 NBPF14Q5TI25 921 aa16.51■□□□□ 0.23
TRIM60-201ENST00000341062 NBPF10Q6P3W6 841 aaKnown RBP16.51■□□□□ 0.23
TRIM60-201ENST00000341062 NBPF15Q8N660 670 aa16.51■□□□□ 0.23
TRIM60-201ENST00000341062 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
TRIM60-201ENST00000341062 SRCAPQ6ZRS2 3230 aa16.5■□□□□ 0.23
TRIM60-201ENST00000341062 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
TRIM60-201ENST00000341062 DEFB132Q7Z7B7 95 aa16.5■□□□□ 0.23
TRIM60-201ENST00000341062 PHAXQ9H814 394 aaKnown RBP16.5■□□□□ 0.23
TRIM60-201ENST00000341062 IBTKQ9P2D0 1353 aaPredicted RBP16.5■□□□□ 0.23
TRIM60-201ENST00000341062 CYP19A1P11511 503 aaPredicted RBP16.49■□□□□ 0.23
TRIM60-201ENST00000341062 PDE1AP54750 535 aa16.49■□□□□ 0.23
TRIM60-201ENST00000341062 LRP10Q7Z4F1 713 aa16.49■□□□□ 0.23
TRIM60-201ENST00000341062 USP26Q9BXU7 913 aa16.49■□□□□ 0.23
TRIM60-201ENST00000341062 USP44Q9H0E7 712 aa16.49■□□□□ 0.23
TRIM60-201ENST00000341062 MYL6BP14649 208 aa16.48■□□□□ 0.23
TRIM60-201ENST00000341062 EN1Q05925 392 aaPredicted RBP16.48■□□□□ 0.23
TRIM60-201ENST00000341062 SPRYD3Q8NCJ5 442 aa16.48■□□□□ 0.23
TRIM60-201ENST00000341062 CICQ96RK0 1608 aaPredicted RBP16.48■□□□□ 0.23
TRIM60-201ENST00000341062 K7ELQ4 463 aaPredicted RBP16.48■□□□□ 0.23
TRIM60-201ENST00000341062 MCM4P33991 863 aa16.48■□□□□ 0.23
TRIM60-201ENST00000341062 RABEP1Q15276 862 aa16.48■□□□□ 0.23
TRIM60-201ENST00000341062 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
TRIM60-201ENST00000341062 CCNL1Q9UK58 526 aaPredicted RBP16.48■□□□□ 0.23
TRIM60-201ENST00000341062 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
TRIM60-201ENST00000341062 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
TRIM60-201ENST00000341062 INTS5Q6P9B9 1019 aaKnown RBP16.47■□□□□ 0.23
TRIM60-201ENST00000341062 SMARCC1Q92922 1105 aaPredicted RBP16.47■□□□□ 0.23
TRIM60-201ENST00000341062 ZNF831Q5JPB2 1677 aa16.47■□□□□ 0.23
TRIM60-201ENST00000341062 APBB1O00213 710 aa16.46■□□□□ 0.23
TRIM60-201ENST00000341062 UBTFL1P0CB47 393 aaPredicted RBP16.46■□□□□ 0.23
TRIM60-201ENST00000341062 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
TRIM60-201ENST00000341062 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
TRIM60-201ENST00000341062 SSH3Q8TE77 659 aa16.46■□□□□ 0.23
TRIM60-201ENST00000341062 LRRFIP2Q9Y608 721 aaKnown RBP16.46■□□□□ 0.23
TRIM60-201ENST00000341062 REC8O95072 547 aa16.46■□□□□ 0.22
TRIM60-201ENST00000341062 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.22
TRIM60-201ENST00000341062 TXNRD1Q16881 649 aa16.46■□□□□ 0.22
TRIM60-201ENST00000341062 SRCIN1Q9C0H9 1055 aa16.46■□□□□ 0.22
TRIM60-201ENST00000341062 EXOC6BQ9Y2D4 811 aa16.46■□□□□ 0.22
TRIM60-201ENST00000341062 RREB1Q92766 1687 aa16.45■□□□□ 0.22
TRIM60-201ENST00000341062 AOX1Q06278 1338 aa16.45■□□□□ 0.22
TRIM60-201ENST00000341062 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
TRIM60-201ENST00000341062 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
TRIM60-201ENST00000341062 C4BP0C0L5 1744 aa16.45■□□□□ 0.22
TRIM60-201ENST00000341062 AK9Q5TCS8 1911 aa16.44■□□□□ 0.22
TRIM60-201ENST00000341062 CAMKK2Q96RR4 588 aa16.44■□□□□ 0.22
TRIM60-201ENST00000341062 MX1P20591 662 aa16.44■□□□□ 0.22
TRIM60-201ENST00000341062 POLA2Q14181 598 aa16.44■□□□□ 0.22
TRIM60-201ENST00000341062 GOLGB1Q14789 3259 aaKnown RBP16.43■□□□□ 0.22
TRIM60-201ENST00000341062 ERC2O15083 957 aa16.43■□□□□ 0.22
TRIM60-201ENST00000341062 AIMP1Q12904 312 aaKnown RBP16.43■□□□□ 0.22
TRIM60-201ENST00000341062 BEND3Q5T5X7 828 aa16.43■□□□□ 0.22
TRIM60-201ENST00000341062 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
TRIM60-201ENST00000341062 DNAAF4Q8WXU2 420 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms