RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 PAXIP1Q6ZW49 1069 aaPredicted RBP18.59■□□□□ 0.57
BRAT1-201ENST00000340611 CACNA1FO60840 1977 aa18.59■□□□□ 0.57
BRAT1-201ENST00000340611 MAP3K2Q9Y2U5 619 aa18.58■□□□□ 0.57
BRAT1-201ENST00000340611 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.57
BRAT1-201ENST00000340611 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
BRAT1-201ENST00000340611 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
BRAT1-201ENST00000340611 ADCY9O60503 1353 aa18.58■□□□□ 0.56
BRAT1-201ENST00000340611 GLI3P10071 1580 aa18.58■□□□□ 0.56
BRAT1-201ENST00000340611 CWF19L2Q2TBE0 894 aaKnown RBP18.57■□□□□ 0.56
BRAT1-201ENST00000340611 SLC4A9Q96Q91 983 aa18.57■□□□□ 0.56
BRAT1-201ENST00000340611 DOT1LQ8TEK3 1739 aa18.57■□□□□ 0.56
BRAT1-201ENST00000340611 NBPF26B4DH59 902 aa18.57■□□□□ 0.56
BRAT1-201ENST00000340611 KCNQ4P56696 695 aa18.57■□□□□ 0.56
BRAT1-201ENST00000340611 NBPF14Q5TI25 921 aa18.57■□□□□ 0.56
BRAT1-201ENST00000340611 NBPF10Q6P3W6 841 aaKnown RBP18.57■□□□□ 0.56
BRAT1-201ENST00000340611 DNAJC10Q8IXB1 793 aa18.57■□□□□ 0.56
BRAT1-201ENST00000340611 NBPF15Q8N660 670 aa18.57■□□□□ 0.56
BRAT1-201ENST00000340611 DDX21Q9NR30 783 aaKnown RBP eCLIP18.57■□□□□ 0.56
BRAT1-201ENST00000340611 GRPEL1Q9HAV7 217 aa18.56■□□□□ 0.56
BRAT1-201ENST00000340611 PLEKHG2Q9H7P9 1386 aa18.56■□□□□ 0.56
BRAT1-201ENST00000340611 KCPQ6ZWJ8 1503 aa18.56■□□□□ 0.56
BRAT1-201ENST00000340611 MRE11P49959 708 aa18.56■□□□□ 0.56
BRAT1-201ENST00000340611 BARGINQ6ZT62 677 aa18.56■□□□□ 0.56
BRAT1-201ENST00000340611 PLCD3Q8N3E9 789 aa18.56■□□□□ 0.56
BRAT1-201ENST00000340611 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-201ENST00000340611 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-201ENST00000340611 RWDD1Q9H446 243 aaPredicted RBP18.56■□□□□ 0.56
BRAT1-201ENST00000340611 VGLL3A8MV65 326 aa18.55■□□□□ 0.56
BRAT1-201ENST00000340611 APBB1O00213 710 aa18.55■□□□□ 0.56
BRAT1-201ENST00000340611 DNAAF4Q8WXU2 420 aa18.55■□□□□ 0.56
BRAT1-201ENST00000340611 MCM4P33991 863 aa18.55■□□□□ 0.56
BRAT1-201ENST00000340611 R3HCC1Q9Y3T6 440 aaKnown RBP18.54■□□□□ 0.56
BRAT1-201ENST00000340611 BCL9O00512 1426 aa18.54■□□□□ 0.56
BRAT1-201ENST00000340611 CCT4P50991 539 aaKnown RBP18.53■□□□□ 0.56
BRAT1-201ENST00000340611 HYPKQ9NX55 129 aa18.53■□□□□ 0.56
BRAT1-201ENST00000340611 TRAK2O60296 914 aa18.53■□□□□ 0.56
BRAT1-201ENST00000340611 NBPF7P0C2Y1 421 aaPredicted RBP18.53■□□□□ 0.56
BRAT1-201ENST00000340611 TTLL7Q6ZT98 887 aa18.53■□□□□ 0.56
BRAT1-201ENST00000340611 LRP10Q7Z4F1 713 aa18.53■□□□□ 0.56
BRAT1-201ENST00000340611 GJD4Q96KN9 370 aaPredicted RBP18.53■□□□□ 0.56
BRAT1-201ENST00000340611 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
BRAT1-201ENST00000340611 USP44Q9H0E7 712 aa18.53■□□□□ 0.56
BRAT1-201ENST00000340611 UBR2Q8IWV8 1755 aa18.53■□□□□ 0.56
BRAT1-201ENST00000340611 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
BRAT1-201ENST00000340611 RIC3Q7Z5B4 369 aa18.53■□□□□ 0.56
BRAT1-201ENST00000340611 BEND3Q5T5X7 828 aa18.52■□□□□ 0.56
BRAT1-201ENST00000340611 SRCIN1Q9C0H9 1055 aa18.52■□□□□ 0.55
BRAT1-201ENST00000340611 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
BRAT1-201ENST00000340611 LRRFIP2Q9Y608 721 aaKnown RBP18.51■□□□□ 0.55
BRAT1-201ENST00000340611 ATP5J2-PTCD1G3V325 749 aa18.51■□□□□ 0.55
BRAT1-201ENST00000340611 KSR2Q6VAB6 950 aa18.51■□□□□ 0.55
BRAT1-201ENST00000340611 PAPPAQ13219 1627 aa18.51■□□□□ 0.55
BRAT1-201ENST00000340611 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
BRAT1-201ENST00000340611 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
BRAT1-201ENST00000340611 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
BRAT1-201ENST00000340611 HDAC1Q13547 482 aaPredicted RBP18.5■□□□□ 0.55
BRAT1-201ENST00000340611 MYD88Q99836 296 aa18.5■□□□□ 0.55
BRAT1-201ENST00000340611 LNPKQ9C0E8 428 aa18.5■□□□□ 0.55
BRAT1-201ENST00000340611 ATP10DQ9P241 1426 aa18.49■□□□□ 0.55
BRAT1-201ENST00000340611 ANKRD13DQ6ZTN6 518 aa18.48■□□□□ 0.55
BRAT1-201ENST00000340611 SMIM5Q71RC9 77 aa18.48■□□□□ 0.55
BRAT1-201ENST00000340611 PNMA6EA0A0J9YXQ4 647 aa18.48■□□□□ 0.55
BRAT1-201ENST00000340611 IGKV5-2P06315 115 aa18.48■□□□□ 0.55
BRAT1-201ENST00000340611 C22orf23Q9BZE7 217 aa18.48■□□□□ 0.55
BRAT1-201ENST00000340611 TAF7LQ5H9L4 462 aa18.47■□□□□ 0.55
BRAT1-201ENST00000340611 ANKRD45Q5TZF3 282 aa18.47■□□□□ 0.55
BRAT1-201ENST00000340611 SEPT12Q8IYM1 358 aa18.47■□□□□ 0.55
BRAT1-201ENST00000340611 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.55
BRAT1-201ENST00000340611 GNAI2P04899 355 aa18.46■□□□□ 0.55
BRAT1-201ENST00000340611 MAPK8IP2Q13387 824 aaPredicted RBP18.46■□□□□ 0.55
BRAT1-201ENST00000340611 ANP32BQ92688 251 aaKnown RBP18.46■□□□□ 0.55
BRAT1-201ENST00000340611 CHMP5Q9NZZ3 219 aa18.46■□□□□ 0.55
BRAT1-201ENST00000340611 LAMB4A4D0S4 1761 aa18.46■□□□□ 0.55
BRAT1-201ENST00000340611 TRPC5Q9UL62 973 aaPredicted RBP18.46■□□□□ 0.55
BRAT1-201ENST00000340611 ZBTB1Q9Y2K1 713 aa18.46■□□□□ 0.55
BRAT1-201ENST00000340611 SMARCA5O60264 1052 aaPredicted RBP18.45■□□□□ 0.54
BRAT1-201ENST00000340611 DDX58O95786 925 aaKnown RBP18.45■□□□□ 0.54
BRAT1-201ENST00000340611 ANKRD44Q8N8A2 993 aa18.45■□□□□ 0.54
BRAT1-201ENST00000340611 C9orf78Q9NZ63 289 aaPredicted RBP18.45■□□□□ 0.54
BRAT1-201ENST00000340611 ATP6V1AP38606 617 aa18.45■□□□□ 0.54
BRAT1-201ENST00000340611 SMC5Q8IY18 1101 aa18.45■□□□□ 0.54
BRAT1-201ENST00000340611 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
BRAT1-201ENST00000340611 EXOC6BQ9Y2D4 811 aa18.44■□□□□ 0.54
BRAT1-201ENST00000340611 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.44■□□□□ 0.54
BRAT1-201ENST00000340611 ITPK1Q13572 414 aa18.44■□□□□ 0.54
BRAT1-201ENST00000340611 CYP19A1P11511 503 aaPredicted RBP18.43■□□□□ 0.54
BRAT1-201ENST00000340611 UQCRHLA0A096LP55 91 aa18.43■□□□□ 0.54
BRAT1-201ENST00000340611 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
BRAT1-201ENST00000340611 UQCRHP07919 91 aa18.43■□□□□ 0.54
BRAT1-201ENST00000340611 GNAI3P08754 354 aa18.43■□□□□ 0.54
BRAT1-201ENST00000340611 SIK1P57059 783 aa18.43■□□□□ 0.54
BRAT1-201ENST00000340611 GAS2L3Q86XJ1 694 aa18.43■□□□□ 0.54
BRAT1-201ENST00000340611 C16orf71Q8IYS4 520 aaPredicted RBP18.43■□□□□ 0.54
BRAT1-201ENST00000340611 PALLDQ8WX93 1383 aa18.42■□□□□ 0.54
BRAT1-201ENST00000340611 MSNP26038 577 aaKnown RBP18.42■□□□□ 0.54
BRAT1-201ENST00000340611 PPP4R3BQ5MIZ7 849 aa18.42■□□□□ 0.54
BRAT1-201ENST00000340611 MAP7D2Q96T17 732 aa18.42■□□□□ 0.54
BRAT1-201ENST00000340611 METTL22Q9BUU2 404 aaPredicted RBP18.42■□□□□ 0.54
BRAT1-201ENST00000340611 TBC1D2BQ9UPU7 963 aa18.42■□□□□ 0.54
BRAT1-201ENST00000340611 ATRNO75882 1429 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms