RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 ANKRD13DQ6ZTN6 518 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 IL27Q8NEV9 243 aa8.98□□□□□ -0.97
NUP43-201ENST00000340413 UBR3Q6ZT12 1888 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 RTL9Q8NET4 1388 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 IRX6P78412 446 aaPredicted RBP8.97□□□□□ -0.97
NUP43-201ENST00000340413 NUCB1Q02818 461 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 ISCA1Q9BUE6 129 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
NUP43-201ENST00000340413 MAP3K15Q6ZN16 1313 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 SSH3Q8TE77 659 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 ARAP2Q8WZ64 1704 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 SLC39A6Q13433 755 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 B4GALNT3Q6L9W6 998 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 KIF6Q6ZMV9 814 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 SPEF2Q9C093 1822 aa8.97□□□□□ -0.97
NUP43-201ENST00000340413 FAM98CQ17RN3 349 aaKnown RBP8.96□□□□□ -0.97
NUP43-201ENST00000340413 RABL6Q3YEC7 729 aaPredicted RBP8.96□□□□□ -0.97
NUP43-201ENST00000340413 USP44Q9H0E7 712 aa8.96□□□□□ -0.97
NUP43-201ENST00000340413 QTRT2Q9H974 415 aaKnown RBP8.96□□□□□ -0.97
NUP43-201ENST00000340413 CCDC87Q9NVE4 849 aa8.96□□□□□ -0.97
NUP43-201ENST00000340413 MAP3K2Q9Y2U5 619 aa8.96□□□□□ -0.97
NUP43-201ENST00000340413 UBTFL1P0CB47 393 aaPredicted RBP8.96□□□□□ -0.98
NUP43-201ENST00000340413 PRIM1P49642 420 aaKnown RBP8.96□□□□□ -0.98
NUP43-201ENST00000340413 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 USP16Q9Y5T5 823 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 PI4KAP2A4QPH2 592 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 NEURL1BA8MQ27 555 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 NBPF26B4DH59 902 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 EIF2S2P20042 333 aaKnown RBP8.96□□□□□ -0.98
NUP43-201ENST00000340413 EIF5P55010 431 aaKnown RBP8.96□□□□□ -0.98
NUP43-201ENST00000340413 NBPF14Q5TI25 921 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 NBPF10Q6P3W6 841 aaKnown RBP8.96□□□□□ -0.98
NUP43-201ENST00000340413 NBPF15Q8N660 670 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 PI4KAP1Q8N8J0 262 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 XAGE3Q8WTP9 111 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 PHAXQ9H814 394 aaKnown RBP8.96□□□□□ -0.98
NUP43-201ENST00000340413 TNNQ9UQP3 1299 aa8.96□□□□□ -0.98
NUP43-201ENST00000340413 CCDC9Q9Y3X0 531 aaKnown RBP8.96□□□□□ -0.98
NUP43-201ENST00000340413 LOC102724428A0A0B4J2F2 783 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 H7C1W4 665 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 GRM8O00222 908 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 SIK1P57059 783 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 PARP10Q53GL7 1025 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 SEPT12Q8IYM1 358 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 NRXN2Q9P2S2 1712 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 USP42Q9H9J4 1324 aaKnown RBP8.95□□□□□ -0.98
NUP43-201ENST00000340413 TCIRG1Q13488 830 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 GCKRQ14397 625 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 GIGYF2Q6Y7W6 1299 aaKnown RBP8.95□□□□□ -0.98
NUP43-201ENST00000340413 RIC3Q7Z5B4 369 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 OSBPL3Q9H4L5 887 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 ASAP1Q9ULH1 1129 aa8.95□□□□□ -0.98
NUP43-201ENST00000340413 COPS6Q7L5N1 327 aa8.94□□□□□ -0.98
NUP43-201ENST00000340413 IGHDP01880 384 aa8.94□□□□□ -0.98
NUP43-201ENST00000340413 CASP7P55210 303 aa8.94□□□□□ -0.98
NUP43-201ENST00000340413 CASZ1Q86V15 1759 aa8.94□□□□□ -0.98
NUP43-201ENST00000340413 PLSCR1O15162 318 aa8.94□□□□□ -0.98
NUP43-201ENST00000340413 PCCAP05165 728 aaPredicted RBP8.94□□□□□ -0.98
NUP43-201ENST00000340413 KRT27Q7Z3Y8 459 aa8.94□□□□□ -0.98
NUP43-201ENST00000340413 CWC25Q9NXE8 425 aaPredicted RBP8.94□□□□□ -0.98
NUP43-201ENST00000340413 ZNF652Q9Y2D9 606 aa8.94□□□□□ -0.98
NUP43-201ENST00000340413 MYH14Q7Z406 1995 aaKnown RBP8.93□□□□□ -0.98
NUP43-201ENST00000340413 PROSER3Q2NL68 480 aa8.93□□□□□ -0.98
NUP43-201ENST00000340413 INTS5Q6P9B9 1019 aaKnown RBP8.93□□□□□ -0.98
NUP43-201ENST00000340413 DNAJC10Q8IXB1 793 aa8.93□□□□□ -0.98
NUP43-201ENST00000340413 USP35Q9P2H5 1018 aa8.93□□□□□ -0.98
NUP43-201ENST00000340413 EPB41L2O43491 1005 aaKnown RBP8.93□□□□□ -0.98
NUP43-201ENST00000340413 MEIS3Q99687 375 aa8.93□□□□□ -0.98
NUP43-201ENST00000340413 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
NUP43-201ENST00000340413 SLC4A9Q96Q91 983 aa8.93□□□□□ -0.98
NUP43-201ENST00000340413 GPR108Q9NPR9 543 aa8.93□□□□□ -0.98
NUP43-201ENST00000340413 RPS6KA4O75676 772 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 SIRT2Q8IXJ6 389 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 ABCC12Q96J65 1359 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 IGSF3O75054 1194 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 CHD1LQ86WJ1 897 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 ZNF34Q8IZ26 560 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 RFX7Q2KHR2 1363 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 A0A1B0GUL6 1792 aa8.92□□□□□ -0.98
NUP43-201ENST00000340413 CIAO1O76071 339 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 COPRSQ9NQ92 184 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 STAP2Q9UGK3 403 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 PRAMEF22A3QJZ6 481 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 RXRBP28702 533 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 FLAD1Q8NFF5 587 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 C9orf78Q9NZ63 289 aaPredicted RBP8.91□□□□□ -0.98
NUP43-201ENST00000340413 PDZRN3Q9UPQ7 1066 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 DUOX1Q9NRD9 1551 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 F6X3S4 739 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 ATP6V1AP38606 617 aa8.91□□□□□ -0.98
NUP43-201ENST00000340413 CRKLP46109 303 aaKnown RBP8.91□□□□□ -0.98
NUP43-201ENST00000340413 ZBTB38Q8NAP3 1195 aaPredicted RBP8.91□□□□□ -0.98
NUP43-201ENST00000340413 BMP2KLQ5H9B9 411 aa8.9□□□□□ -0.98
NUP43-201ENST00000340413 SLC4A10Q6U841 1118 aa8.9□□□□□ -0.98
NUP43-201ENST00000340413 SALL3Q9BXA9 1300 aa8.9□□□□□ -0.98
NUP43-201ENST00000340413 SSFA2P28290 1259 aa8.9□□□□□ -0.99
NUP43-201ENST00000340413 KIF1BPQ96EK5 621 aa8.9□□□□□ -0.99
NUP43-201ENST00000340413 MYD88Q99836 296 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms