RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 DNAJC10Q8IXB1 793 aa27.72■■■□□ 2.03
PDLIM2-203ENST00000339162 UTYO14607 1347 aa27.71■■■□□ 2.03
PDLIM2-203ENST00000339162 ERBB4Q15303 1308 aa27.71■■■□□ 2.03
PDLIM2-203ENST00000339162 PLBD2Q8NHP8 589 aa27.71■■■□□ 2.03
PDLIM2-203ENST00000339162 ZNF330Q9Y3S2 320 aaPredicted RBP27.71■■■□□ 2.03
PDLIM2-203ENST00000339162 A0A0G2JS52 829 aa27.71■■■□□ 2.03
PDLIM2-203ENST00000339162 PRIM1P49642 420 aaKnown RBP27.71■■■□□ 2.03
PDLIM2-203ENST00000339162 C22orf23Q9BZE7 217 aa27.71■■■□□ 2.03
PDLIM2-203ENST00000339162 ITGB4P16144 1822 aa27.7■■■□□ 2.03
PDLIM2-203ENST00000339162 SPATA31A5Q5VU36 1347 aa27.7■■■□□ 2.03
PDLIM2-203ENST00000339162 SPATA31A7Q8IWB4 1347 aa27.7■■■□□ 2.03
PDLIM2-203ENST00000339162 MTX1Q13505 466 aa27.7■■■□□ 2.02
PDLIM2-203ENST00000339162 C8orf37Q96NL8 207 aa27.7■■■□□ 2.02
PDLIM2-203ENST00000339162 SDSP20132 328 aa27.69■■■□□ 2.02
PDLIM2-203ENST00000339162 PA2G4Q9UQ80 394 aaKnown RBP27.69■■■□□ 2.02
PDLIM2-203ENST00000339162 BCL9O00512 1426 aa27.69■■■□□ 2.02
PDLIM2-203ENST00000339162 ZBTB3Q9H5J0 574 aa27.69■■■□□ 2.02
PDLIM2-203ENST00000339162 THRAP3Q9Y2W1 955 aaKnown RBP27.69■■■□□ 2.02
PDLIM2-203ENST00000339162 CDC45O75419 566 aa27.68■■■□□ 2.02
PDLIM2-203ENST00000339162 RHPN1Q8TCX5 695 aa27.68■■■□□ 2.02
PDLIM2-203ENST00000339162 SLIT2O94813 1529 aa27.68■■■□□ 2.02
PDLIM2-203ENST00000339162 SALL3Q9BXA9 1300 aa27.68■■■□□ 2.02
PDLIM2-203ENST00000339162 CDCA7Q9BWT1 371 aaPredicted RBP27.68■■■□□ 2.02
PDLIM2-203ENST00000339162 WNK3Q9BYP7 1800 aa27.68■■■□□ 2.02
PDLIM2-203ENST00000339162 MX1P20591 662 aa27.67■■■□□ 2.02
PDLIM2-203ENST00000339162 HDAC5Q9UQL6 1122 aa27.67■■■□□ 2.02
PDLIM2-203ENST00000339162 RAB11FIP3O75154 756 aa27.67■■■□□ 2.02
PDLIM2-203ENST00000339162 EPHA10Q5JZY3 1008 aa27.67■■■□□ 2.02
PDLIM2-203ENST00000339162 NUTM1Q86Y26 1132 aa27.67■■■□□ 2.02
PDLIM2-203ENST00000339162 NGLY1Q96IV0 654 aa27.67■■■□□ 2.02
PDLIM2-203ENST00000339162 OSBPL3Q9H4L5 887 aa27.67■■■□□ 2.02
PDLIM2-203ENST00000339162 ARFGEF2Q9Y6D5 1785 aa27.66■■■□□ 2.02
PDLIM2-203ENST00000339162 OS9Q13438 667 aaPredicted RBP27.66■■■□□ 2.02
PDLIM2-203ENST00000339162 ACSBG1Q96GR2 724 aa27.66■■■□□ 2.02
PDLIM2-203ENST00000339162 SLC4A9Q96Q91 983 aa27.66■■■□□ 2.02
PDLIM2-203ENST00000339162 UBE3BQ7Z3V4 1068 aa27.65■■■□□ 2.02
PDLIM2-203ENST00000339162 DAXXQ9UER7 740 aaPredicted RBP27.65■■■□□ 2.02
PDLIM2-203ENST00000339162 MARCH10Q8NA82 808 aaPredicted RBP27.65■■■□□ 2.02
PDLIM2-203ENST00000339162 A0A087WZG4 1122 aa27.64■■■□□ 2.01
PDLIM2-203ENST00000339162 KIF1BPQ96EK5 621 aa27.64■■■□□ 2.01
PDLIM2-203ENST00000339162 RTL5Q5HYW3 569 aaPredicted RBP27.63■■■□□ 2.01
PDLIM2-203ENST00000339162 UNC5CLQ8IV45 518 aa27.63■■■□□ 2.01
PDLIM2-203ENST00000339162 VSIG10Q8N0Z9 540 aa27.63■■■□□ 2.01
PDLIM2-203ENST00000339162 JCADQ9P266 1359 aa27.63■■■□□ 2.01
PDLIM2-203ENST00000339162 ARXQ96QS3 562 aa27.62■■■□□ 2.01
PDLIM2-203ENST00000339162 FAM98CQ17RN3 349 aaKnown RBP27.61■■■□□ 2.01
PDLIM2-203ENST00000339162 KLHDC4Q8TBB5 520 aa27.61■■■□□ 2.01
PDLIM2-203ENST00000339162 TEX13AQ9BXU3 409 aaPredicted RBP27.61■■■□□ 2.01
PDLIM2-203ENST00000339162 STARD3NLO95772 234 aa27.61■■■□□ 2.01
PDLIM2-203ENST00000339162 AFDNP55196 1824 aaKnown RBP27.61■■■□□ 2.01
PDLIM2-203ENST00000339162 HSP90AB4PQ58FF6 505 aa27.6■■■□□ 2.01
PDLIM2-203ENST00000339162 LRP6O75581 1613 aa27.6■■■□□ 2.01
PDLIM2-203ENST00000339162 NWD2Q9ULI1 1742 aa27.6■■■□□ 2.01
PDLIM2-203ENST00000339162 BARGINQ6ZT62 677 aa27.6■■■□□ 2.01
PDLIM2-203ENST00000339162 SIL1Q9H173 461 aa27.6■■■□□ 2.01
PDLIM2-203ENST00000339162 DOT1LQ8TEK3 1739 aa27.59■■■□□ 2.01
PDLIM2-203ENST00000339162 STAP2Q9UGK3 403 aa27.58■■■□□ 2.01
PDLIM2-203ENST00000339162 BCL9LQ86UU0 1499 aa27.58■■■□□ 2
PDLIM2-203ENST00000339162 AEBP2Q6ZN18 517 aaPredicted RBP27.57■■■□□ 2
PDLIM2-203ENST00000339162 CYP19A1P11511 503 aaPredicted RBP27.56■■■□□ 2
PDLIM2-203ENST00000339162 CASP7P55210 303 aa27.56■■■□□ 2
PDLIM2-203ENST00000339162 CERKQ8TCT0 537 aa27.56■■■□□ 2
PDLIM2-203ENST00000339162 CWC25Q9NXE8 425 aaPredicted RBP27.56■■■□□ 2
PDLIM2-203ENST00000339162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.56■■■□□ 2
PDLIM2-203ENST00000339162 TRIM6-TRIM34B2RNG4 842 aa27.56■■■□□ 2
PDLIM2-203ENST00000339162 RILPL2Q969X0 211 aa27.56■■■□□ 2
PDLIM2-203ENST00000339162 NUP188Q5SRE5 1749 aa27.55■■■□□ 2
PDLIM2-203ENST00000339162 RBM25P49756 843 aaKnown RBP27.55■■■□□ 2
PDLIM2-203ENST00000339162 ZBTB1Q9Y2K1 713 aa27.54■■■□□ 2
PDLIM2-203ENST00000339162 H7C1W4 665 aa27.53■■■□□ 2
PDLIM2-203ENST00000339162 SASH1O94885 1247 aa27.53■■■□□ 2
PDLIM2-203ENST00000339162 MAP4K4O95819 1239 aaPredicted RBP27.53■■■□□ 2
PDLIM2-203ENST00000339162 G3BP1Q13283 466 aaKnown RBP eCLIP27.53■■■□□ 2
PDLIM2-203ENST00000339162 CLASRPQ8N2M8 674 aaKnown RBP27.53■■■□□ 2
PDLIM2-203ENST00000339162 KCNQ2O43526 872 aa27.52■■■□□ 2
PDLIM2-203ENST00000339162 VPS72Q15906 364 aa27.52■■■□□ 2
PDLIM2-203ENST00000339162 CASC1Q6TDU7 716 aa27.52■■■□□ 2
PDLIM2-203ENST00000339162 KIF6Q6ZMV9 814 aa27.52■■■□□ 2
PDLIM2-203ENST00000339162 BECN1Q14457 450 aa27.51■■□□□ 1.99
PDLIM2-203ENST00000339162 ERC1Q8IUD2 1116 aa27.51■■□□□ 1.99
PDLIM2-203ENST00000339162 CCDC191Q8NCU4 936 aa27.51■■□□□ 1.99
PDLIM2-203ENST00000339162 PI4K2BQ8TCG2 481 aa27.51■■□□□ 1.99
PDLIM2-203ENST00000339162 RABL6Q3YEC7 729 aaPredicted RBP27.51■■□□□ 1.99
PDLIM2-203ENST00000339162 LMBR1LQ6UX01 489 aa27.51■■□□□ 1.99
PDLIM2-203ENST00000339162 TBC1D2Q9BYX2 928 aa27.51■■□□□ 1.99
PDLIM2-203ENST00000339162 TCIRG1Q13488 830 aa27.5■■□□□ 1.99
PDLIM2-203ENST00000339162 FNBP4Q8N3X1 1017 aaPredicted RBP27.5■■□□□ 1.99
PDLIM2-203ENST00000339162 USP21Q9UK80 565 aa27.5■■□□□ 1.99
PDLIM2-203ENST00000339162 CHMP3Q9Y3E7 222 aa27.5■■□□□ 1.99
PDLIM2-203ENST00000339162 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.49■■□□□ 1.99
PDLIM2-203ENST00000339162 RFX5P48382 616 aaPredicted RBP27.49■■□□□ 1.99
PDLIM2-203ENST00000339162 FOXO4P98177 505 aa27.49■■□□□ 1.99
PDLIM2-203ENST00000339162 HLFQ16534 295 aa27.49■■□□□ 1.99
PDLIM2-203ENST00000339162 AACSQ86V21 672 aa27.49■■□□□ 1.99
PDLIM2-203ENST00000339162 ISCA1Q9BUE6 129 aa27.48■■□□□ 1.99
PDLIM2-203ENST00000339162 AOX1Q06278 1338 aa27.48■■□□□ 1.99
PDLIM2-203ENST00000339162 PTPN12Q05209 780 aaKnown RBP27.48■■□□□ 1.99
PDLIM2-203ENST00000339162 IFIT2P09913 472 aaKnown RBP27.47■■□□□ 1.99
PDLIM2-203ENST00000339162 HSPA1LP34931 641 aa27.47■■□□□ 1.99
PDLIM2-203ENST00000339162 ATP6V1AP38606 617 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms