RNA–Protein interactions for RNA: ENST00000338758.11

PARVB-201, Transcript of parvin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARVB, Length 5,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-201ENST00000338758 ZNF790Q6PG37 636 aa16.75■□□□□ 0.27
PARVB-201ENST00000338758 ANKRD18AQ8IVF6 992 aa16.75■□□□□ 0.27
PARVB-201ENST00000338758 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
PARVB-201ENST00000338758 ATP2B3Q16720 1220 aa16.75■□□□□ 0.27
PARVB-201ENST00000338758 DDX21Q9NR30 783 aaKnown RBP eCLIP16.75■□□□□ 0.27
PARVB-201ENST00000338758 RTCBQ9Y3I0 505 aaKnown RBP16.74■□□□□ 0.27
PARVB-201ENST00000338758 ERCC6L2Q5T890 1561 aa16.74■□□□□ 0.27
PARVB-201ENST00000338758 METP08581 1390 aa16.74■□□□□ 0.27
PARVB-201ENST00000338758 ZNF592Q92610 1267 aa16.74■□□□□ 0.27
PARVB-201ENST00000338758 ST5P78524 1137 aa16.74■□□□□ 0.27
PARVB-201ENST00000338758 SAMD9LQ8IVG5 1584 aa16.74■□□□□ 0.27
PARVB-201ENST00000338758 KRT18P05783 430 aaKnown RBP16.73■□□□□ 0.27
PARVB-201ENST00000338758 CHD1O14646 1710 aa16.73■□□□□ 0.27
PARVB-201ENST00000338758 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
PARVB-201ENST00000338758 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
PARVB-201ENST00000338758 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
PARVB-201ENST00000338758 TFCP2L1Q9NZI6 479 aa16.73■□□□□ 0.27
PARVB-201ENST00000338758 G2E3Q7L622 706 aa16.73■□□□□ 0.27
PARVB-201ENST00000338758 IQCA1Q86XH1 822 aa16.73■□□□□ 0.27
PARVB-201ENST00000338758 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
PARVB-201ENST00000338758 HAND2P61296 217 aa16.72■□□□□ 0.27
PARVB-201ENST00000338758 TTF1Q15361 905 aaPredicted RBP16.72■□□□□ 0.27
PARVB-201ENST00000338758 ZNF444Q8N0Y2 327 aaPredicted RBP16.72■□□□□ 0.27
PARVB-201ENST00000338758 NUCB1Q02818 461 aa16.72■□□□□ 0.27
PARVB-201ENST00000338758 NASPP49321 788 aaPredicted RBP16.72■□□□□ 0.27
PARVB-201ENST00000338758 HOMER1Q86YM7 354 aa16.72■□□□□ 0.27
PARVB-201ENST00000338758 UTP14AQ9BVJ6 771 aaKnown RBP16.72■□□□□ 0.27
PARVB-201ENST00000338758 LDHCP07864 332 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 TPTE2Q6XPS3 522 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
PARVB-201ENST00000338758 IL15P40933 162 aaPredicted RBP16.71■□□□□ 0.27
PARVB-201ENST00000338758 PDE1AP54750 535 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 SPATA32Q96LK8 384 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 R3HCC1Q9Y3T6 440 aaKnown RBP16.71■□□□□ 0.27
PARVB-201ENST00000338758 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 TMEM94Q12767 1356 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
PARVB-201ENST00000338758 SLF2Q8IX21 1173 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
PARVB-201ENST00000338758 IFIT3O14879 490 aaKnown RBP16.71■□□□□ 0.26
PARVB-201ENST00000338758 UQCRFS1P1P0C7P4 283 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 SDSP20132 328 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
PARVB-201ENST00000338758 CDCA7Q9BWT1 371 aaPredicted RBP16.7■□□□□ 0.26
PARVB-201ENST00000338758 RNF41Q9H4P4 317 aaPredicted RBP16.7■□□□□ 0.26
PARVB-201ENST00000338758 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
PARVB-201ENST00000338758 CFAP45Q9UL16 551 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 IRS4O14654 1257 aaPredicted RBP16.7■□□□□ 0.26
PARVB-201ENST00000338758 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
PARVB-201ENST00000338758 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
PARVB-201ENST00000338758 WASF1Q92558 559 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 CHL1O00533 1208 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 ZHX3Q9H4I2 956 aa16.7■□□□□ 0.26
PARVB-201ENST00000338758 HMGB1P09429 215 aaKnown RBP16.69■□□□□ 0.26
PARVB-201ENST00000338758 MRE11P49959 708 aa16.69■□□□□ 0.26
PARVB-201ENST00000338758 EPS15P42566 896 aa16.69■□□□□ 0.26
PARVB-201ENST00000338758 LETM1O95202 739 aaPredicted RBP16.69■□□□□ 0.26
PARVB-201ENST00000338758 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
PARVB-201ENST00000338758 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
PARVB-201ENST00000338758 GNPATO15228 680 aa16.69■□□□□ 0.26
PARVB-201ENST00000338758 OFD1O75665 1012 aa16.69■□□□□ 0.26
PARVB-201ENST00000338758 PDILTQ8N807 584 aa16.68■□□□□ 0.26
PARVB-201ENST00000338758 CEP85Q6P2H3 762 aa16.68■□□□□ 0.26
PARVB-201ENST00000338758 BAG3O95817 575 aa16.68■□□□□ 0.26
PARVB-201ENST00000338758 TNMDQ9H2S6 317 aa16.68■□□□□ 0.26
PARVB-201ENST00000338758 LIMCH1Q9UPQ0 1083 aa16.68■□□□□ 0.26
PARVB-201ENST00000338758 UGGT1Q9NYU2 1555 aa16.68■□□□□ 0.26
PARVB-201ENST00000338758 A1BGP04217 495 aa16.68■□□□□ 0.26
PARVB-201ENST00000338758 SSBP05455 408 aaKnown RBP eCLIP16.68■□□□□ 0.26
PARVB-201ENST00000338758 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
PARVB-201ENST00000338758 SLC4A8Q2Y0W8 1093 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 ZBTB40Q9NUA8 1239 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 SLC12A7Q9Y666 1083 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 GUCY1B3Q02153 619 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 FAM89AQ96GI7 184 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 SH2B1Q9NRF2 756 aaPredicted RBP16.67■□□□□ 0.26
PARVB-201ENST00000338758 CFAP74Q9C0B2 1584 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 TSPOAP1O95153 1857 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 TSPY26PQ9H489 355 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 NSFL1CQ9UNZ2 370 aaKnown RBP16.67■□□□□ 0.26
PARVB-201ENST00000338758 MCM4P33991 863 aa16.67■□□□□ 0.26
PARVB-201ENST00000338758 ZNF496Q96IT1 587 aaPredicted RBP16.67■□□□□ 0.26
PARVB-201ENST00000338758 EFCAB6Q5THR3 1501 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
PARVB-201ENST00000338758 SPTY2D1Q68D10 685 aaPredicted RBP16.66■□□□□ 0.26
PARVB-201ENST00000338758 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 ZCCHC11Q5TAX3 1644 aaKnown RBP16.66■□□□□ 0.26
PARVB-201ENST00000338758 TMEM132AQ24JP5 1023 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
PARVB-201ENST00000338758 PLEKHG1Q9ULL1 1385 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 SMC2O95347 1197 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 ZNF76P36508 570 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 DCTPP1Q9H773 170 aa16.66■□□□□ 0.26
PARVB-201ENST00000338758 SBNO2Q9Y2G9 1366 aa16.65■□□□□ 0.26
PARVB-201ENST00000338758 CCDC96Q2M329 555 aa16.65■□□□□ 0.26
PARVB-201ENST00000338758 DNAJC10Q8IXB1 793 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms