RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
ARHGEF3-202ENST00000338458 GCKRQ14397 625 aa12.43□□□□□ -0.42
ARHGEF3-202ENST00000338458 KAZALD1Q96I82 304 aa12.43□□□□□ -0.42
ARHGEF3-202ENST00000338458 C8orf37Q96NL8 207 aa12.43□□□□□ -0.42
ARHGEF3-202ENST00000338458 LTBP4Q8N2S1 1624 aa12.43□□□□□ -0.42
ARHGEF3-202ENST00000338458 A0A087WZG4 1122 aa12.43□□□□□ -0.42
ARHGEF3-202ENST00000338458 LRP10Q7Z4F1 713 aa12.43□□□□□ -0.42
ARHGEF3-202ENST00000338458 POLA2Q14181 598 aa12.42□□□□□ -0.42
ARHGEF3-202ENST00000338458 BECN1Q14457 450 aa12.42□□□□□ -0.42
ARHGEF3-202ENST00000338458 UNC5CLQ8IV45 518 aa12.42□□□□□ -0.42
ARHGEF3-202ENST00000338458 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
ARHGEF3-202ENST00000338458 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
ARHGEF3-202ENST00000338458 DDB1Q16531 1140 aa12.41□□□□□ -0.42
ARHGEF3-202ENST00000338458 MRC1P22897 1456 aa12.41□□□□□ -0.42
ARHGEF3-202ENST00000338458 NGLY1Q96IV0 654 aa12.41□□□□□ -0.42
ARHGEF3-202ENST00000338458 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF3-202ENST00000338458 KIF1BPQ96EK5 621 aa12.41□□□□□ -0.42
ARHGEF3-202ENST00000338458 CCDC85AQ96PX6 553 aaPredicted RBP12.41□□□□□ -0.42
ARHGEF3-202ENST00000338458 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
ARHGEF3-202ENST00000338458 CCDC8Q9H0W5 538 aaPredicted RBP12.4□□□□□ -0.42
ARHGEF3-202ENST00000338458 PHLPP1O60346 1717 aa12.4□□□□□ -0.42
ARHGEF3-202ENST00000338458 G3BP1Q13283 466 aaKnown RBP eCLIP12.39□□□□□ -0.43
ARHGEF3-202ENST00000338458 CASC1Q6TDU7 716 aa12.39□□□□□ -0.43
ARHGEF3-202ENST00000338458 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
ARHGEF3-202ENST00000338458 FAM98CQ17RN3 349 aaKnown RBP12.39□□□□□ -0.43
ARHGEF3-202ENST00000338458 RAB11FIP3O75154 756 aa12.39□□□□□ -0.43
ARHGEF3-202ENST00000338458 AACSQ86V21 672 aa12.38□□□□□ -0.43
ARHGEF3-202ENST00000338458 CLASRPQ8N2M8 674 aaKnown RBP12.38□□□□□ -0.43
ARHGEF3-202ENST00000338458 GPTP24298 496 aa12.38□□□□□ -0.43
ARHGEF3-202ENST00000338458 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
ARHGEF3-202ENST00000338458 FAM182BQ5T319 152 aa12.38□□□□□ -0.43
ARHGEF3-202ENST00000338458 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
ARHGEF3-202ENST00000338458 SHANK3Q9BYB0 1731 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 SALL3Q9BXA9 1300 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 IFIT2P09913 472 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 HDAC5Q9UQL6 1122 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 HSP90AB4PQ58FF6 505 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 COL14A1Q05707 1796 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 KCNQ4P56696 695 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 MARCH10Q8NA82 808 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 OSBPL3Q9H4L5 887 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 TBC1D2BQ9UPU7 963 aa12.37□□□□□ -0.43
ARHGEF3-202ENST00000338458 FAM177BA6PVY3 158 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 SASH1O94885 1247 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 STARD3NLO95772 234 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 KCPQ6ZWJ8 1503 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 TOGARAM1Q9Y4F4 1720 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 KCNQ2O43526 872 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 MTX1Q13505 466 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 CWC25Q9NXE8 425 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 TLR7Q9NYK1 1049 aaKnown RBP12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 ZBTB1Q9Y2K1 713 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 RBM25P49756 843 aaKnown RBP12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 ANO2Q9NQ90 1003 aa12.36□□□□□ -0.43
ARHGEF3-202ENST00000338458 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 KIF2CQ99661 725 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 UTYO14607 1347 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 DISP2A7MBM2 1401 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 HLFQ16534 295 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 KIF6Q6ZMV9 814 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 ZNF594Q96JF6 807 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 USP26Q9BXU7 913 aa12.35□□□□□ -0.43
ARHGEF3-202ENST00000338458 PLEKHG2Q9H7P9 1386 aa12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 ERC2O15083 957 aa12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 NDUFB9Q9Y6M9 179 aa12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 PI4K2BQ8TCG2 481 aa12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 IL25Q9H293 177 aa12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 STAP2Q9UGK3 403 aa12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 HSP90AA1P07900 732 aaKnown RBP12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 CHMLP26374 656 aa12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 AEBP2Q6ZN18 517 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF3-202ENST00000338458 GLI3P10071 1580 aa12.33□□□□□ -0.43
ARHGEF3-202ENST00000338458 ATP6V1AP38606 617 aa12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 BOLA2Q9H3K6 86 aa12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 ERBB4Q15303 1308 aa12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 SPATA31A5Q5VU36 1347 aa12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 SPATA31A7Q8IWB4 1347 aa12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 TFCP2Q12800 502 aa12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 BCL9O00512 1426 aa12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 AFDNP55196 1824 aaKnown RBP12.33□□□□□ -0.44
ARHGEF3-202ENST00000338458 REC8O95072 547 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 ERC1Q8IUD2 1116 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 ESYT1Q9BSJ8 1104 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 CYP19A1P11511 503 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 PTPN12Q05209 780 aaKnown RBP12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 SMIM5Q71RC9 77 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 NOL8Q76FK4 1167 aaKnown RBP12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 TNS2Q63HR2 1409 aa12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 FRAT2O75474 233 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF3-202ENST00000338458 PTF1AQ7RTS3 328 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms