RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 CCDC144CPQ8IYA2 1237 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 OTUD7AQ8TE49 926 aaPredicted RBP8.03□□□□□ -1.12
CAST-203ENST00000338252 RRP15Q9Y3B9 282 aaKnown RBP8.03□□□□□ -1.12
CAST-203ENST00000338252 ABCC4O15439 1325 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 TMPOP42166 694 aaKnown RBP8.03□□□□□ -1.12
CAST-203ENST00000338252 PTPN14Q15678 1187 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 LUZP1Q86V48 1076 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 PACS2Q86VP3 889 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 CNPY4Q8N129 248 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 FBXO18Q8NFZ0 1043 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 GOLGA5Q8TBA6 731 aa8.03□□□□□ -1.12
CAST-203ENST00000338252 ZSCAN22P10073 491 aaPredicted RBP8.02□□□□□ -1.13
CAST-203ENST00000338252 ATP2B1P20020 1258 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 ERCC6LQ2NKX8 1250 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 CCDC93Q567U6 631 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 REXO1L1PQ8IX06 675 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 CWC15Q9P013 229 aaKnown RBP8.02□□□□□ -1.13
CAST-203ENST00000338252 INO80Q9ULG1 1556 aaPredicted RBP8.02□□□□□ -1.13
CAST-203ENST00000338252 A0A1B0GUL7 405 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 CDC25BP30305 580 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 LRRC8AQ8IWT6 810 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 BANK1Q8NDB2 785 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.02□□□□□ -1.13
CAST-203ENST00000338252 CFAP53Q96M91 514 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 PALD1Q9ULE6 856 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 ELP1O95163 1332 aa8.02□□□□□ -1.13
CAST-203ENST00000338252 U2AF1L5P0DN76 240 aaPredicted RBP8.01□□□□□ -1.13
CAST-203ENST00000338252 GSCP56915 257 aaPredicted RBP8.01□□□□□ -1.13
CAST-203ENST00000338252 ANAPC15P60006 121 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 U2AF1Q01081 240 aaKnown RBP eCLIP8.01□□□□□ -1.13
CAST-203ENST00000338252 SAMD1Q6SPF0 538 aaPredicted RBP8.01□□□□□ -1.13
CAST-203ENST00000338252 LRRN4CLQ8ND94 238 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 ZNF428Q96B54 188 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 PSD3Q9NYI0 1048 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 ZRANB1Q9UGI0 708 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 TMEM94Q12767 1356 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 MAST1Q9Y2H9 1570 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 POLR3GO15318 223 aaPredicted RBP8.01□□□□□ -1.13
CAST-203ENST00000338252 TXNDC2Q86VQ3 553 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 GOLGA6L1Q8N7Z2 621 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 TDRD7Q8NHU6 1098 aaKnown RBP8.01□□□□□ -1.13
CAST-203ENST00000338252 CBX8Q9HC52 389 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 TOMM22Q9NS69 142 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 ATP8B1O43520 1251 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 NEMFO60524 1076 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 TYRO3Q06418 890 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 GPS2Q13227 327 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 DRC7Q8IY82 874 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 MRPL50Q8N5N7 158 aaKnown RBP8.01□□□□□ -1.13
CAST-203ENST00000338252 DONSONQ9NYP3 566 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 CLIP2Q9UDT6 1046 aa8.01□□□□□ -1.13
CAST-203ENST00000338252 SBNO2Q9Y2G9 1366 aa8□□□□□ -1.13
CAST-203ENST00000338252 MAGEA9P43362 315 aa8□□□□□ -1.13
CAST-203ENST00000338252 PROSER2Q86WR7 435 aaPredicted RBP8□□□□□ -1.13
CAST-203ENST00000338252 CCAR2Q8N163 923 aaKnown RBP8□□□□□ -1.13
CAST-203ENST00000338252 DRC1Q96MC2 740 aa8□□□□□ -1.13
CAST-203ENST00000338252 TRIM5Q9C035 493 aa8□□□□□ -1.13
CAST-203ENST00000338252 SPATA31A6Q5VVP1 1343 aa8□□□□□ -1.13
CAST-203ENST00000338252 NPHP1O15259 732 aa8□□□□□ -1.13
CAST-203ENST00000338252 FIBPO43427 364 aa8□□□□□ -1.13
CAST-203ENST00000338252 F13A1P00488 732 aa8□□□□□ -1.13
CAST-203ENST00000338252 TTC31Q49AM3 519 aaPredicted RBP8□□□□□ -1.13
CAST-203ENST00000338252 SWT1Q5T5J6 900 aaKnown RBP8□□□□□ -1.13
CAST-203ENST00000338252 RBM33Q96EV2 1170 aaKnown RBP8□□□□□ -1.13
CAST-203ENST00000338252 ZCCHC17Q9NP64 241 aaKnown RBP8□□□□□ -1.13
CAST-203ENST00000338252 SLAIN2Q9P270 581 aa8□□□□□ -1.13
CAST-203ENST00000338252 ROBO1Q9Y6N7 1651 aa8□□□□□ -1.13
CAST-203ENST00000338252 ATP10DQ9P241 1426 aa8□□□□□ -1.13
CAST-203ENST00000338252 TUBGCP6Q96RT7 1819 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 SASH3O75995 380 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 CCZ1BP86790 482 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 CCZ1P86791 482 aaPredicted RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 NOL8Q76FK4 1167 aaKnown RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 SUGP1Q8IWZ8 645 aaKnown RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 EXOC4Q96A65 974 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 KIF24Q5T7B8 1368 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 KIF2AO00139 706 aaPredicted RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 STX6O43752 255 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 SYT1P21579 422 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 LTKP29376 864 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 OAS2P29728 719 aaKnown RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 ARID5BQ14865 1188 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 MAP3K11Q16584 847 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 ANO6Q4KMQ2 910 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 ARHGAP29Q52LW3 1261 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 TMCO3Q6UWJ1 677 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 RBM43Q6ZSC3 357 aaKnown RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 GPATCH11Q8N954 259 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 ORC3Q9UBD5 711 aaPredicted RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 EID1Q9Y6B2 187 aa7.99□□□□□ -1.13
CAST-203ENST00000338252 COL3A1P02461 1466 aaPredicted RBP7.99□□□□□ -1.13
CAST-203ENST00000338252 NUTM2BA6NNL0 878 aaPredicted RBP7.98□□□□□ -1.13
CAST-203ENST00000338252 NUTM2EB1AL46 878 aaPredicted RBP7.98□□□□□ -1.13
CAST-203ENST00000338252 TBC1D8O95759 1140 aa7.98□□□□□ -1.13
CAST-203ENST00000338252 SKILP12757 684 aa7.98□□□□□ -1.13
CAST-203ENST00000338252 SART3Q15020 963 aaKnown RBP7.98□□□□□ -1.13
CAST-203ENST00000338252 NOM1Q5C9Z4 860 aaKnown RBP7.98□□□□□ -1.13
CAST-203ENST00000338252 NUTM2DQ5VT03 806 aaPredicted RBP7.98□□□□□ -1.13
CAST-203ENST00000338252 FILIP1Q7Z7B0 1213 aa7.98□□□□□ -1.13
CAST-203ENST00000338252 NUTM2AQ8IVF1 878 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms