RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 EAF2Q96CJ1 260 aaPredicted RBP10.77□□□□□ -0.68
SNCA-201ENST00000336904 ZDHHC9Q9Y397 364 aa10.77□□□□□ -0.68
SNCA-201ENST00000336904 TRPM3Q9HCF6 1732 aaPredicted RBP10.77□□□□□ -0.69
SNCA-201ENST00000336904 SLIT3O75094 1523 aa10.77□□□□□ -0.69
SNCA-201ENST00000336904 SASH1O94885 1247 aa10.77□□□□□ -0.69
SNCA-201ENST00000336904 PTH1RQ03431 593 aa10.77□□□□□ -0.69
SNCA-201ENST00000336904 FAM227BQ96M60 508 aa10.77□□□□□ -0.69
SNCA-201ENST00000336904 ZBTB3Q9H5J0 574 aa10.77□□□□□ -0.69
SNCA-201ENST00000336904 DDX21Q9NR30 783 aaKnown RBP eCLIP10.77□□□□□ -0.69
SNCA-201ENST00000336904 BABAM1Q9NWV8 329 aa10.77□□□□□ -0.69
SNCA-201ENST00000336904 DDX49Q9Y6V7 483 aaKnown RBP10.77□□□□□ -0.69
SNCA-201ENST00000336904 DDX11L8A8MPP1 907 aa10.76□□□□□ -0.69
SNCA-201ENST00000336904 PRPF40AO75400 957 aaKnown RBP10.76□□□□□ -0.69
SNCA-201ENST00000336904 A1BGP04217 495 aa10.76□□□□□ -0.69
SNCA-201ENST00000336904 IFNL2Q8IZJ0 200 aa10.76□□□□□ -0.69
SNCA-201ENST00000336904 CLASRPQ8N2M8 674 aaKnown RBP10.76□□□□□ -0.69
SNCA-201ENST00000336904 LMO7Q8WWI1 1683 aa10.76□□□□□ -0.69
SNCA-201ENST00000336904 HYPKQ9NX55 129 aa10.76□□□□□ -0.69
SNCA-201ENST00000336904 STAP2Q9UGK3 403 aa10.76□□□□□ -0.69
SNCA-201ENST00000336904 NSFL1CQ9UNZ2 370 aaKnown RBP10.76□□□□□ -0.69
SNCA-201ENST00000336904 CAVIN1Q6NZI2 390 aaKnown RBP10.76□□□□□ -0.69
SNCA-201ENST00000336904 TTLL7Q6ZT98 887 aa10.76□□□□□ -0.69
SNCA-201ENST00000336904 USP54Q70EL1 1684 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 NEURL1BA8MQ27 555 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 CADPS2Q86UW7 1296 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 LINS1Q8NG48 757 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 DIAPH3Q9NSV4 1193 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 TAF6LQ9Y6J9 622 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 HOXB7P09629 217 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 ADCK5Q3MIX3 580 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 PRPF40BQ6NWY9 871 aaKnown RBP10.75□□□□□ -0.69
SNCA-201ENST00000336904 LARP1Q6PKG0 1096 aaKnown RBP10.75□□□□□ -0.69
SNCA-201ENST00000336904 ANKRD13DQ6ZTN6 518 aa10.75□□□□□ -0.69
SNCA-201ENST00000336904 DDX58O95786 925 aaKnown RBP10.74□□□□□ -0.69
SNCA-201ENST00000336904 G3BP1Q13283 466 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNCA-201ENST00000336904 CNTROBQ8N137 903 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 C5P01031 1676 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 SPATA31A3Q5VYP0 1347 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 A0A087WZG4 1122 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 RAB11FIP3O75154 756 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 LARGE1O95461 756 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 MCCP23508 829 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 NEXNQ0ZGT2 675 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 GCKRQ14397 625 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 PXDNLA1KZ92 1463 aa10.74□□□□□ -0.69
SNCA-201ENST00000336904 DNAJC2Q99543 621 aaKnown RBP10.74□□□□□ -0.69
SNCA-201ENST00000336904 CACNA1FO60840 1977 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 NBPF26B4DH59 902 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 SGSM2O43147 1006 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 PPFIA3O75145 1194 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 CASTP20810 708 aaKnown RBP10.73□□□□□ -0.69
SNCA-201ENST00000336904 KCNJ4P48050 445 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 NBPF14Q5TI25 921 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 NBPF10Q6P3W6 841 aaKnown RBP10.73□□□□□ -0.69
SNCA-201ENST00000336904 NBPF15Q8N660 670 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 ZNF594Q96JF6 807 aaPredicted RBP10.73□□□□□ -0.69
SNCA-201ENST00000336904 CIZ1Q9ULV3 898 aaPredicted RBP10.73□□□□□ -0.69
SNCA-201ENST00000336904 SNX14Q9Y5W7 946 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 TFCP2Q12800 502 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 ECHDC1Q9NTX5 307 aa10.73□□□□□ -0.69
SNCA-201ENST00000336904 SNRPA1P09661 255 aaKnown RBP10.72□□□□□ -0.69
SNCA-201ENST00000336904 EVA1CP58658 441 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 CCDC129Q6ZRS4 1044 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 LSG1Q9H089 658 aaKnown RBP10.72□□□□□ -0.69
SNCA-201ENST00000336904 TNS3Q68CZ2 1445 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 HEG1Q9ULI3 1381 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 A0A0D9SFI3 127 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 ALDH1L1O75891 902 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
SNCA-201ENST00000336904 SYTL4Q96C24 671 aaPredicted RBP10.72□□□□□ -0.69
SNCA-201ENST00000336904 DCAF5Q96JK2 942 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 FMNL2Q96PY5 1086 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 SEC62Q99442 399 aaKnown RBP10.72□□□□□ -0.69
SNCA-201ENST00000336904 FSD1Q9BTV5 496 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 GRPEL1Q9HAV7 217 aa10.72□□□□□ -0.69
SNCA-201ENST00000336904 AK2P54819 239 aa10.71□□□□□ -0.69
SNCA-201ENST00000336904 NECAB1Q8N987 351 aa10.71□□□□□ -0.69
SNCA-201ENST00000336904 JAKMIP1Q96N16 626 aaKnown RBP10.71□□□□□ -0.69
SNCA-201ENST00000336904 RRAGDQ9NQL2 400 aaPredicted RBP10.71□□□□□ -0.69
SNCA-201ENST00000336904 SLAIN2Q9P270 581 aa10.71□□□□□ -0.69
SNCA-201ENST00000336904 ALS2Q96Q42 1657 aa10.71□□□□□ -0.69
SNCA-201ENST00000336904 GLRX3O76003 335 aaKnown RBP10.71□□□□□ -0.69
SNCA-201ENST00000336904 LMBR1LQ6UX01 489 aa10.71□□□□□ -0.69
SNCA-201ENST00000336904 SYNE4Q8N205 404 aa10.71□□□□□ -0.69
SNCA-201ENST00000336904 METTL22Q9BUU2 404 aaPredicted RBP10.71□□□□□ -0.69
SNCA-201ENST00000336904 FSD2A1L4K1 749 aa10.71□□□□□ -0.7
SNCA-201ENST00000336904 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.7
SNCA-201ENST00000336904 HSPA4P34932 840 aa10.71□□□□□ -0.7
SNCA-201ENST00000336904 DDX46Q7L014 1031 aaKnown RBP10.71□□□□□ -0.7
SNCA-201ENST00000336904 ZNF589Q86UQ0 364 aaPredicted RBP10.71□□□□□ -0.7
SNCA-201ENST00000336904 ZCRB1Q8TBF4 217 aaKnown RBP10.71□□□□□ -0.7
SNCA-201ENST00000336904 GPT2Q8TD30 523 aa10.71□□□□□ -0.7
SNCA-201ENST00000336904 NEUROD6Q96NK8 337 aa10.71□□□□□ -0.7
SNCA-201ENST00000336904 TUBGCP6Q96RT7 1819 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 NCAPD2Q15021 1401 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 DBNDD2Q9BQY9 259 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 LMBRD1Q9NUN5 540 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 TAOK2Q9UL54 1235 aa10.7□□□□□ -0.7
SNCA-201ENST00000336904 RAD50Q92878 1312 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms