RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 DCTN1Q14203 1278 aa32.52■■■□□ 2.8
CDKN3-202ENST00000335183 SMC1BQ8NDV3 1235 aa32.52■■■□□ 2.8
CDKN3-202ENST00000335183 SLX4Q8IY92 1834 aa32.51■■■□□ 2.8
CDKN3-202ENST00000335183 ARFGEF2Q9Y6D5 1785 aa32.5■■■□□ 2.79
CDKN3-202ENST00000335183 SNRPA1P09661 255 aaKnown RBP32.5■■■□□ 2.79
CDKN3-202ENST00000335183 VEGFAP15692 232 aaPredicted RBP32.5■■■□□ 2.79
CDKN3-202ENST00000335183 DLG5Q8TDM6 1919 aa32.49■■■□□ 2.79
CDKN3-202ENST00000335183 CNKSR1Q969H4 720 aa32.47■■■□□ 2.79
CDKN3-202ENST00000335183 KLRG1Q96E93 195 aa32.46■■■□□ 2.79
CDKN3-202ENST00000335183 ERFEQ4G0M1 354 aa32.45■■■□□ 2.79
CDKN3-202ENST00000335183 STYK1Q6J9G0 422 aa32.45■■■□□ 2.79
CDKN3-202ENST00000335183 DPY19L2Q6NUT2 758 aa32.45■■■□□ 2.79
CDKN3-202ENST00000335183 NBPF5PQ86XG9 351 aaPredicted RBP32.45■■■□□ 2.79
CDKN3-202ENST00000335183 ZNF652Q9Y2D9 606 aa32.45■■■□□ 2.79
CDKN3-202ENST00000335183 HTATSF1O43719 755 aaKnown RBP32.44■■■□□ 2.78
CDKN3-202ENST00000335183 SRGNP10124 158 aa32.44■■■□□ 2.78
CDKN3-202ENST00000335183 CLEC4GQ6UXB4 293 aa32.44■■■□□ 2.78
CDKN3-202ENST00000335183 MASTLQ96GX5 879 aa32.44■■■□□ 2.78
CDKN3-202ENST00000335183 LAMB4A4D0S4 1761 aa32.44■■■□□ 2.78
CDKN3-202ENST00000335183 PRPF40BQ6NWY9 871 aaKnown RBP32.43■■■□□ 2.78
CDKN3-202ENST00000335183 TAOK3Q9H2K8 898 aa32.43■■■□□ 2.78
CDKN3-202ENST00000335183 NBPF26B4DH59 902 aa32.41■■■□□ 2.78
CDKN3-202ENST00000335183 TAF7Q15545 349 aaPredicted RBP32.41■■■□□ 2.78
CDKN3-202ENST00000335183 NBPF10Q6P3W6 841 aaKnown RBP32.41■■■□□ 2.78
CDKN3-202ENST00000335183 NBPF15Q8N660 670 aa32.41■■■□□ 2.78
CDKN3-202ENST00000335183 NEFMP07197 916 aa32.4■■■□□ 2.78
CDKN3-202ENST00000335183 MIS18AQ9NYP9 233 aa32.4■■■□□ 2.78
CDKN3-202ENST00000335183 LTBP3Q9NS15 1303 aa32.4■■■□□ 2.78
CDKN3-202ENST00000335183 NIP7Q9Y221 180 aaKnown RBP eCLIP32.39■■■□□ 2.78
CDKN3-202ENST00000335183 POTECB2RU33 542 aa32.38■■■□□ 2.77
CDKN3-202ENST00000335183 SOGA3Q5TF21 947 aa32.38■■■□□ 2.77
CDKN3-202ENST00000335183 KDM3BQ7LBC6 1761 aa32.37■■■□□ 2.77
CDKN3-202ENST00000335183 FAM177BA6PVY3 158 aa32.37■■■□□ 2.77
CDKN3-202ENST00000335183 JMYQ8N9B5 988 aa32.36■■■□□ 2.77
CDKN3-202ENST00000335183 TPTE2Q6XPS3 522 aa32.35■■■□□ 2.77
CDKN3-202ENST00000335183 NUP98P52948 1817 aa32.33■■■□□ 2.77
CDKN3-202ENST00000335183 NPR1P16066 1061 aa32.33■■■□□ 2.77
CDKN3-202ENST00000335183 HLFQ16534 295 aa32.32■■■□□ 2.76
CDKN3-202ENST00000335183 NGEFQ8N5V2 710 aa32.32■■■□□ 2.76
CDKN3-202ENST00000335183 RGL2O15211 777 aa32.31■■■□□ 2.76
CDKN3-202ENST00000335183 DDNO94850 711 aaPredicted RBP32.31■■■□□ 2.76
CDKN3-202ENST00000335183 CCDC93Q567U6 631 aa32.31■■■□□ 2.76
CDKN3-202ENST00000335183 GTF2E1P29083 439 aaPredicted RBP32.3■■■□□ 2.76
CDKN3-202ENST00000335183 PNISRQ8TF01 805 aaKnown RBP32.3■■■□□ 2.76
CDKN3-202ENST00000335183 C7orf43Q8WVR3 580 aa32.29■■■□□ 2.76
CDKN3-202ENST00000335183 KLRG2A4D1S0 409 aaPredicted RBP32.27■■■□□ 2.76
CDKN3-202ENST00000335183 PLEKHF1Q96S99 279 aa32.27■■■□□ 2.76
CDKN3-202ENST00000335183 THUMPD2Q9BTF0 503 aaKnown RBP32.27■■■□□ 2.76
CDKN3-202ENST00000335183 NFE2L2Q16236 605 aa32.26■■■□□ 2.75
CDKN3-202ENST00000335183 RRP7AQ9Y3A4 280 aaKnown RBP32.26■■■□□ 2.75
CDKN3-202ENST00000335183 OLFM4Q6UX06 510 aa32.25■■■□□ 2.75
CDKN3-202ENST00000335183 SCN4AP35499 1836 aa32.25■■■□□ 2.75
CDKN3-202ENST00000335183 EIF4A1P60842 406 aaKnown RBP32.24■■■□□ 2.75
CDKN3-202ENST00000335183 FKBP4Q02790 459 aaKnown RBP eCLIP32.24■■■□□ 2.75
CDKN3-202ENST00000335183 MAPK8IP3Q9UPT6 1336 aa32.24■■■□□ 2.75
CDKN3-202ENST00000335183 POTEIP0CG38 1075 aa32.23■■■□□ 2.75
CDKN3-202ENST00000335183 POTEJP0CG39 1038 aa32.23■■■□□ 2.75
CDKN3-202ENST00000335183 MYL6BP14649 208 aa32.23■■■□□ 2.75
CDKN3-202ENST00000335183 CHADLQ6NUI6 762 aa32.23■■■□□ 2.75
CDKN3-202ENST00000335183 ZNF277Q9NRM2 450 aaPredicted RBP32.23■■■□□ 2.75
CDKN3-202ENST00000335183 ALDH1B1P30837 517 aa32.22■■■□□ 2.75
CDKN3-202ENST00000335183 KIF6Q6ZMV9 814 aa32.22■■■□□ 2.75
CDKN3-202ENST00000335183 MAP3K15Q6ZN16 1313 aa32.22■■■□□ 2.75
CDKN3-202ENST00000335183 NUTM1Q86Y26 1132 aa32.21■■■□□ 2.75
CDKN3-202ENST00000335183 NYXQ9GZU5 481 aa32.21■■■□□ 2.75
CDKN3-202ENST00000335183 PNNQ9H307 717 aaKnown RBP32.21■■■□□ 2.75
CDKN3-202ENST00000335183 ABCC12Q96J65 1359 aa32.2■■■□□ 2.75
CDKN3-202ENST00000335183 ERVV-1B6SEH8 477 aa32.2■■■□□ 2.75
CDKN3-202ENST00000335183 TTLL7Q6ZT98 887 aa32.2■■■□□ 2.75
CDKN3-202ENST00000335183 RTKN2Q8IZC4 609 aa32.2■■■□□ 2.75
CDKN3-202ENST00000335183 IQCA1LA6NCM1 817 aa32.19■■■□□ 2.74
CDKN3-202ENST00000335183 COL13A1Q5TAT6 717 aaPredicted RBP32.19■■■□□ 2.74
CDKN3-202ENST00000335183 ZBTB3Q9H5J0 574 aa32.18■■■□□ 2.74
CDKN3-202ENST00000335183 GPTP24298 496 aa32.17■■■□□ 2.74
CDKN3-202ENST00000335183 ZNF541Q9H0D2 1346 aa32.17■■■□□ 2.74
CDKN3-202ENST00000335183 L3MBTL3Q96JM7 780 aaPredicted RBP32.16■■■□□ 2.74
CDKN3-202ENST00000335183 SYNE4Q8N205 404 aa32.15■■■□□ 2.74
CDKN3-202ENST00000335183 HSPA1AP0DMV8 641 aaKnown RBP32.14■■■□□ 2.74
CDKN3-202ENST00000335183 HSPA1BP0DMV9 641 aaKnown RBP32.14■■■□□ 2.74
CDKN3-202ENST00000335183 IARSP41252 1262 aaKnown RBP32.14■■■□□ 2.74
CDKN3-202ENST00000335183 CRY2Q49AN0 593 aa32.14■■■□□ 2.74
CDKN3-202ENST00000335183 TAF1DQ9H5J8 278 aaPredicted RBP32.14■■■□□ 2.74
CDKN3-202ENST00000335183 UBN2Q6ZU65 1347 aa32.13■■■□□ 2.73
CDKN3-202ENST00000335183 RPGRQ92834 1020 aaKnown RBP32.13■■■□□ 2.73
CDKN3-202ENST00000335183 CREBZFQ9NS37 354 aa32.13■■■□□ 2.73
CDKN3-202ENST00000335183 TSPYL4Q9UJ04 414 aa32.13■■■□□ 2.73
CDKN3-202ENST00000335183 EAPPQ56P03 285 aaPredicted RBP32.12■■■□□ 2.73
CDKN3-202ENST00000335183 LDHDQ86WU2 507 aa32.12■■■□□ 2.73
CDKN3-202ENST00000335183 SUSD4Q5VX71 490 aa32.11■■■□□ 2.73
CDKN3-202ENST00000335183 MKRN1Q9UHC7 482 aaKnown RBP32.11■■■□□ 2.73
CDKN3-202ENST00000335183 IBTKQ9P2D0 1353 aaPredicted RBP32.1■■■□□ 2.73
CDKN3-202ENST00000335183 HACL1Q9UJ83 578 aa32.1■■■□□ 2.73
CDKN3-202ENST00000335183 ERBB4Q15303 1308 aa32.09■■■□□ 2.73
CDKN3-202ENST00000335183 RIPK4P57078 832 aa32.09■■■□□ 2.73
CDKN3-202ENST00000335183 RIC1Q4ADV7 1423 aa32.09■■■□□ 2.73
CDKN3-202ENST00000335183 EIF2S2P20042 333 aaKnown RBP32.08■■■□□ 2.73
CDKN3-202ENST00000335183 GIGYF2Q6Y7W6 1299 aaKnown RBP32.08■■■□□ 2.73
CDKN3-202ENST00000335183 ZNF34Q8IZ26 560 aa32.08■■■□□ 2.73
CDKN3-202ENST00000335183 PSMD1Q99460 953 aa32.08■■■□□ 2.73
CDKN3-202ENST00000335183 CLEC11AQ9Y240 323 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms