RNA–Protein interactions for RNA: ENST00000333070.4

LCK-201, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene LCK, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-201ENST00000333070 LMBRD1Q9NUN5 540 aa20.12■□□□□ 0.81
LCK-201ENST00000333070 CAVIN1Q6NZI2 390 aaKnown RBP20.11■□□□□ 0.81
LCK-201ENST00000333070 TBC1D9Q6ZT07 1266 aa20.11■□□□□ 0.81
LCK-201ENST00000333070 C16orf71Q8IYS4 520 aaPredicted RBP20.11■□□□□ 0.81
LCK-201ENST00000333070 ZNF496Q96IT1 587 aaPredicted RBP20.11■□□□□ 0.81
LCK-201ENST00000333070 RBM42Q9BTD8 480 aaKnown RBP20.11■□□□□ 0.81
LCK-201ENST00000333070 PCDH11XQ9BZA7 1347 aa20.11■□□□□ 0.81
LCK-201ENST00000333070 PCDH11YQ9BZA8 1340 aa20.11■□□□□ 0.81
LCK-201ENST00000333070 PNMA6EA0A0J9YXQ4 647 aa20.11■□□□□ 0.81
LCK-201ENST00000333070 LARP1Q6PKG0 1096 aaKnown RBP20.11■□□□□ 0.81
LCK-201ENST00000333070 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
LCK-201ENST00000333070 IL2RBP14784 551 aa20.1■□□□□ 0.81
LCK-201ENST00000333070 CABP4P57796 275 aa20.1■□□□□ 0.81
LCK-201ENST00000333070 MCTP1Q6DN14 999 aa20.1■□□□□ 0.81
LCK-201ENST00000333070 SASS6Q6UVJ0 657 aa20.1■□□□□ 0.81
LCK-201ENST00000333070 NKX1-1Q15270 411 aaPredicted RBP20.1■□□□□ 0.81
LCK-201ENST00000333070 ROBO1Q9Y6N7 1651 aa20.09■□□□□ 0.81
LCK-201ENST00000333070 SMARCA5O60264 1052 aaPredicted RBP20.09■□□□□ 0.81
LCK-201ENST00000333070 CYP2E1P05181 493 aaPredicted RBP20.09■□□□□ 0.81
LCK-201ENST00000333070 AHDC1Q5TGY3 1603 aaPredicted RBP20.09■□□□□ 0.81
LCK-201ENST00000333070 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
LCK-201ENST00000333070 NCLP19338 710 aaKnown RBP20.08■□□□□ 0.81
LCK-201ENST00000333070 EVA1CP58658 441 aa20.08■□□□□ 0.81
LCK-201ENST00000333070 STRN4Q9NRL3 753 aa20.08■□□□□ 0.81
LCK-201ENST00000333070 CCDC39Q9UFE4 941 aa20.08■□□□□ 0.81
LCK-201ENST00000333070 MAP3K2Q9Y2U5 619 aa20.08■□□□□ 0.81
LCK-201ENST00000333070 SHANK3Q9BYB0 1731 aa20.08■□□□□ 0.81
LCK-201ENST00000333070 GSPT1P15170 499 aaKnown RBP20.08■□□□□ 0.8
LCK-201ENST00000333070 PRIM1P49642 420 aaKnown RBP20.08■□□□□ 0.8
LCK-201ENST00000333070 RABEP1Q15276 862 aa20.08■□□□□ 0.8
LCK-201ENST00000333070 OTUD7AQ8TE49 926 aaPredicted RBP20.08■□□□□ 0.8
LCK-201ENST00000333070 ALDH1L1O75891 902 aa20.07■□□□□ 0.8
LCK-201ENST00000333070 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
LCK-201ENST00000333070 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
LCK-201ENST00000333070 TTC22Q5TAA0 569 aa20.07■□□□□ 0.8
LCK-201ENST00000333070 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
LCK-201ENST00000333070 SSH3Q8TE77 659 aa20.07■□□□□ 0.8
LCK-201ENST00000333070 APBB1O00213 710 aa20.07■□□□□ 0.8
LCK-201ENST00000333070 FMNL2Q96PY5 1086 aa20.07■□□□□ 0.8
LCK-201ENST00000333070 EXOC6BQ9Y2D4 811 aa20.07■□□□□ 0.8
LCK-201ENST00000333070 ERVV-2B6SEH9 535 aa20.06■□□□□ 0.8
LCK-201ENST00000333070 CWC22Q9HCG8 908 aaKnown RBP20.06■□□□□ 0.8
LCK-201ENST00000333070 GLI3P10071 1580 aa20.06■□□□□ 0.8
LCK-201ENST00000333070 CDC45O75419 566 aa20.05■□□□□ 0.8
LCK-201ENST00000333070 DDX58O95786 925 aaKnown RBP20.05■□□□□ 0.8
LCK-201ENST00000333070 POLA2Q14181 598 aa20.05■□□□□ 0.8
LCK-201ENST00000333070 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
LCK-201ENST00000333070 COL22A1Q8NFW1 1626 aaPredicted RBP20.04■□□□□ 0.8
LCK-201ENST00000333070 LRP10Q7Z4F1 713 aa20.04■□□□□ 0.8
LCK-201ENST00000333070 UTP14CQ5TAP6 766 aaKnown RBP20.04■□□□□ 0.8
LCK-201ENST00000333070 OSBPL3Q9H4L5 887 aa20.04■□□□□ 0.8
LCK-201ENST00000333070 COL14A1Q05707 1796 aaKnown RBP20.03■□□□□ 0.8
LCK-201ENST00000333070 PPP1R42Q7Z4L9 355 aa20.03■□□□□ 0.8
LCK-201ENST00000333070 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
LCK-201ENST00000333070 CCDC94Q9BW85 323 aaPredicted RBP20.03■□□□□ 0.8
LCK-201ENST00000333070 LRRCC1Q9C099 1032 aa20.03■□□□□ 0.8
LCK-201ENST00000333070 BTG4Q9NY30 223 aa20.03■□□□□ 0.8
LCK-201ENST00000333070 SALL3Q9BXA9 1300 aa20.03■□□□□ 0.8
LCK-201ENST00000333070 LRSAM1Q6UWE0 723 aa20.02■□□□□ 0.8
LCK-201ENST00000333070 UBR2Q8IWV8 1755 aa20.01■□□□□ 0.79
LCK-201ENST00000333070 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
LCK-201ENST00000333070 LAMB4A4D0S4 1761 aa20.01■□□□□ 0.79
LCK-201ENST00000333070 DDX54Q8TDD1 881 aaKnown RBP20.01■□□□□ 0.79
LCK-201ENST00000333070 XAGE3Q8WTP9 111 aa20.01■□□□□ 0.79
LCK-201ENST00000333070 PAPPAQ13219 1627 aa20■□□□□ 0.79
LCK-201ENST00000333070 UTYO14607 1347 aa20■□□□□ 0.79
LCK-201ENST00000333070 PRPF40AO75400 957 aaKnown RBP20■□□□□ 0.79
LCK-201ENST00000333070 MYL6BP14649 208 aa20■□□□□ 0.79
LCK-201ENST00000333070 PDE1AP54750 535 aa20■□□□□ 0.79
LCK-201ENST00000333070 MTX1Q13505 466 aa20■□□□□ 0.79
LCK-201ENST00000333070 CWF19L2Q2TBE0 894 aaKnown RBP20■□□□□ 0.79
LCK-201ENST00000333070 GPT2Q8TD30 523 aa20■□□□□ 0.79
LCK-201ENST00000333070 COPS6Q7L5N1 327 aa20■□□□□ 0.79
LCK-201ENST00000333070 COL16A1Q07092 1604 aaPredicted RBP19.99■□□□□ 0.79
LCK-201ENST00000333070 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
LCK-201ENST00000333070 C9orf78Q9NZ63 289 aaPredicted RBP19.99■□□□□ 0.79
LCK-201ENST00000333070 RAB11FIP3O75154 756 aa19.98■□□□□ 0.79
LCK-201ENST00000333070 IGKV5-2P06315 115 aa19.98■□□□□ 0.79
LCK-201ENST00000333070 DMTNQ08495 405 aa19.98■□□□□ 0.79
LCK-201ENST00000333070 RIC3Q7Z5B4 369 aa19.98■□□□□ 0.79
LCK-201ENST00000333070 HDAC5Q9UQL6 1122 aa19.98■□□□□ 0.79
LCK-201ENST00000333070 KCPQ6ZWJ8 1503 aa19.98■□□□□ 0.79
LCK-201ENST00000333070 SDSP20132 328 aa19.98■□□□□ 0.79
LCK-201ENST00000333070 DISP2A7MBM2 1401 aa19.97■□□□□ 0.79
LCK-201ENST00000333070 GRM8O00222 908 aa19.97■□□□□ 0.79
LCK-201ENST00000333070 RBM27Q9P2N5 1060 aaKnown RBP19.97■□□□□ 0.79
LCK-201ENST00000333070 TOGARAM1Q9Y4F4 1720 aa19.97■□□□□ 0.79
LCK-201ENST00000333070 TNS2Q63HR2 1409 aa19.97■□□□□ 0.79
LCK-201ENST00000333070 MYRIPQ8NFW9 859 aa19.97■□□□□ 0.79
LCK-201ENST00000333070 METTL22Q9BUU2 404 aaPredicted RBP19.97■□□□□ 0.79
LCK-201ENST00000333070 SURF6O75683 361 aaKnown RBP19.96■□□□□ 0.79
LCK-201ENST00000333070 ANKRD13DQ6ZTN6 518 aa19.96■□□□□ 0.79
LCK-201ENST00000333070 STAP2Q9UGK3 403 aa19.96■□□□□ 0.79
LCK-201ENST00000333070 KIAA2012Q0VF49 1180 aa19.95■□□□□ 0.78
LCK-201ENST00000333070 PKP1Q13835 747 aa19.95■□□□□ 0.78
LCK-201ENST00000333070 TMEM63CQ9P1W3 806 aa19.95■□□□□ 0.78
LCK-201ENST00000333070 TUBGCP6Q96RT7 1819 aa19.95■□□□□ 0.78
LCK-201ENST00000333070 NEURL1BA8MQ27 555 aa19.95■□□□□ 0.78
LCK-201ENST00000333070 PIP4K2AP48426 406 aaPredicted RBP19.95■□□□□ 0.78
LCK-201ENST00000333070 KAZALD1Q96I82 304 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms