RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CWC25Q9NXE8 425 aaPredicted RBP19.45■□□□□ 0.7
PDGFB-201ENST00000331163 NAP1L2Q9ULW6 460 aaPredicted RBP19.45■□□□□ 0.7
PDGFB-201ENST00000331163 SEC24BO95487 1268 aa19.45■□□□□ 0.7
PDGFB-201ENST00000331163 GJD4Q96KN9 370 aaPredicted RBP19.45■□□□□ 0.7
PDGFB-201ENST00000331163 NCOA3Q9Y6Q9 1424 aa19.45■□□□□ 0.7
PDGFB-201ENST00000331163 GCC1Q96CN9 775 aa19.45■□□□□ 0.7
PDGFB-201ENST00000331163 AK7Q96M32 723 aa19.45■□□□□ 0.7
PDGFB-201ENST00000331163 TRPC5Q9UL62 973 aaPredicted RBP19.45■□□□□ 0.7
PDGFB-201ENST00000331163 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
PDGFB-201ENST00000331163 BOLA2Q9H3K6 86 aa19.44■□□□□ 0.7
PDGFB-201ENST00000331163 ABCC4O15439 1325 aa19.44■□□□□ 0.7
PDGFB-201ENST00000331163 ANO2Q9NQ90 1003 aa19.44■□□□□ 0.7
PDGFB-201ENST00000331163 SNRKQ9NRH2 765 aa19.44■□□□□ 0.7
PDGFB-201ENST00000331163 IQSEC3Q9UPP2 1182 aaPredicted RBP19.44■□□□□ 0.7
PDGFB-201ENST00000331163 HLFQ16534 295 aa19.43■□□□□ 0.7
PDGFB-201ENST00000331163 BEND3Q5T5X7 828 aa19.43■□□□□ 0.7
PDGFB-201ENST00000331163 STRCP1A6NGW2 1772 aa19.43■□□□□ 0.7
PDGFB-201ENST00000331163 COL5A2P05997 1499 aaPredicted RBP19.42■□□□□ 0.7
PDGFB-201ENST00000331163 CRKLP46109 303 aaKnown RBP19.42■□□□□ 0.7
PDGFB-201ENST00000331163 NAP1L5Q96NT1 182 aaPredicted RBP19.42■□□□□ 0.7
PDGFB-201ENST00000331163 RFC4P35249 363 aa19.42■□□□□ 0.7
PDGFB-201ENST00000331163 HDAC5Q9UQL6 1122 aa19.42■□□□□ 0.7
PDGFB-201ENST00000331163 APBA3O96018 575 aa19.41■□□□□ 0.7
PDGFB-201ENST00000331163 MED1Q15648 1581 aaPredicted RBP19.41■□□□□ 0.7
PDGFB-201ENST00000331163 CPDO75976 1380 aa19.41■□□□□ 0.7
PDGFB-201ENST00000331163 TFCP2L1Q9NZI6 479 aa19.41■□□□□ 0.7
PDGFB-201ENST00000331163 STRCQ7RTU9 1775 aa19.41■□□□□ 0.7
PDGFB-201ENST00000331163 FKBP4Q02790 459 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDGFB-201ENST00000331163 GCKRQ14397 625 aa19.4■□□□□ 0.7
PDGFB-201ENST00000331163 MSL1Q68DK7 614 aa19.4■□□□□ 0.7
PDGFB-201ENST00000331163 METTL22Q9BUU2 404 aaPredicted RBP19.4■□□□□ 0.7
PDGFB-201ENST00000331163 SRP68Q9UHB9 627 aaKnown RBP19.4■□□□□ 0.7
PDGFB-201ENST00000331163 AKAP12Q02952 1782 aa19.4■□□□□ 0.7
PDGFB-201ENST00000331163 NEURL1BA8MQ27 555 aa19.4■□□□□ 0.7
PDGFB-201ENST00000331163 KDM6AO15550 1401 aaPredicted RBP19.4■□□□□ 0.7
PDGFB-201ENST00000331163 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.7
PDGFB-201ENST00000331163 KDM2BQ8NHM5 1336 aa19.39■□□□□ 0.7
PDGFB-201ENST00000331163 MPHOSPH8Q99549 860 aa19.39■□□□□ 0.69
PDGFB-201ENST00000331163 IGKV5-2P06315 115 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 NRKQ7Z2Y5 1582 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 SPATA31A5Q5VU36 1347 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 SPATA31A7Q8IWB4 1347 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 HEG1Q9ULI3 1381 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 ATP8B2P98198 1209 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 FBXW7Q969H0 707 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 TIMM10P62072 90 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 HDAC1Q13547 482 aaPredicted RBP19.38■□□□□ 0.69
PDGFB-201ENST00000331163 EPHA10Q5JZY3 1008 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 PLBD2Q8NHP8 589 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 RHPN1Q8TCX5 695 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 CDCA7Q9BWT1 371 aaPredicted RBP19.38■□□□□ 0.69
PDGFB-201ENST00000331163 TEX13AQ9BXU3 409 aaPredicted RBP19.38■□□□□ 0.69
PDGFB-201ENST00000331163 CCDC87Q9NVE4 849 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 CEMIPQ8WUJ3 1361 aa19.38■□□□□ 0.69
PDGFB-201ENST00000331163 NFAT5O94916 1531 aa19.37■□□□□ 0.69
PDGFB-201ENST00000331163 NUCB1Q02818 461 aa19.37■□□□□ 0.69
PDGFB-201ENST00000331163 SF3B2Q13435 895 aaKnown RBP19.37■□□□□ 0.69
PDGFB-201ENST00000331163 NCBP3Q53F19 620 aaKnown RBP19.37■□□□□ 0.69
PDGFB-201ENST00000331163 LDHAL6AQ6ZMR3 332 aa19.37■□□□□ 0.69
PDGFB-201ENST00000331163 KIAA1211Q6ZU35 1233 aa19.37■□□□□ 0.69
PDGFB-201ENST00000331163 GPATCH3Q96I76 525 aa19.37■□□□□ 0.69
PDGFB-201ENST00000331163 KRT27Q7Z3Y8 459 aa19.37■□□□□ 0.69
PDGFB-201ENST00000331163 SOS1Q07889 1333 aaPredicted RBP19.37■□□□□ 0.69
PDGFB-201ENST00000331163 CWC27Q6UX04 472 aaKnown RBP19.37■□□□□ 0.69
PDGFB-201ENST00000331163 JAG2Q9Y219 1238 aa19.37■□□□□ 0.69
PDGFB-201ENST00000331163 SNAP23O00161 211 aa19.36■□□□□ 0.69
PDGFB-201ENST00000331163 MX1P20591 662 aa19.36■□□□□ 0.69
PDGFB-201ENST00000331163 C8orf34Q49A92 452 aa19.36■□□□□ 0.69
PDGFB-201ENST00000331163 DIAPH3Q9NSV4 1193 aa19.36■□□□□ 0.69
PDGFB-201ENST00000331163 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
PDGFB-201ENST00000331163 IFIT5Q13325 482 aaKnown RBP19.36■□□□□ 0.69
PDGFB-201ENST00000331163 METTL24Q5JXM2 366 aa19.36■□□□□ 0.69
PDGFB-201ENST00000331163 RTCBQ9Y3I0 505 aaKnown RBP19.36■□□□□ 0.69
PDGFB-201ENST00000331163 HOXB7P09629 217 aa19.35■□□□□ 0.69
PDGFB-201ENST00000331163 FOXD4L5Q5VV16 416 aaPredicted RBP19.35■□□□□ 0.69
PDGFB-201ENST00000331163 FAM196AQ6ZSG2 479 aa19.35■□□□□ 0.69
PDGFB-201ENST00000331163 FOXD4L4Q8WXT5 416 aaPredicted RBP19.35■□□□□ 0.69
PDGFB-201ENST00000331163 IRS4O14654 1257 aaPredicted RBP19.35■□□□□ 0.69
PDGFB-201ENST00000331163 NBPF5PQ86XG9 351 aaPredicted RBP19.35■□□□□ 0.69
PDGFB-201ENST00000331163 VPS37DQ86XT2 251 aa19.35■□□□□ 0.69
PDGFB-201ENST00000331163 FSD1Q9BTV5 496 aa19.35■□□□□ 0.69
PDGFB-201ENST00000331163 EDC3Q96F86 508 aaKnown RBP19.35■□□□□ 0.69
PDGFB-201ENST00000331163 PALLDQ8WX93 1383 aa19.35■□□□□ 0.69
PDGFB-201ENST00000331163 SMC5Q8IY18 1101 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 DCTPP1Q9H773 170 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 CEP126Q9P2H0 1117 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 PDIA6Q15084 440 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 FGD1P98174 961 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 ITPK1Q13572 414 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 AAMPQ13685 434 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 USPL1Q5W0Q7 1092 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
PDGFB-201ENST00000331163 KIF1BPQ96EK5 621 aa19.34■□□□□ 0.69
PDGFB-201ENST00000331163 LTN1O94822 1766 aa19.33■□□□□ 0.68
PDGFB-201ENST00000331163 DTNBO60941 627 aa19.33■□□□□ 0.68
PDGFB-201ENST00000331163 RXRBP28702 533 aa19.33■□□□□ 0.68
PDGFB-201ENST00000331163 VPS72Q15906 364 aa19.33■□□□□ 0.68
PDGFB-201ENST00000331163 SLC4A9Q96Q91 983 aa19.33■□□□□ 0.68
PDGFB-201ENST00000331163 TFCP2Q12800 502 aa19.32■□□□□ 0.68
PDGFB-201ENST00000331163 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms