RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 CAMK4Q16566 473 aa8.52□□□□□ -1.05
BEST3-202ENST00000330891 DNAJC2Q99543 621 aaKnown RBP8.52□□□□□ -1.05
BEST3-202ENST00000330891 TFIP11Q9UBB9 837 aaKnown RBP8.52□□□□□ -1.05
BEST3-202ENST00000330891 CDC42BPGQ6DT37 1551 aa8.52□□□□□ -1.05
BEST3-202ENST00000330891 CLCN1P35523 988 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 BEND3Q5T5X7 828 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 CLASRPQ8N2M8 674 aaKnown RBP8.51□□□□□ -1.05
BEST3-202ENST00000330891 FAM13BQ9NYF5 915 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 TBX22Q9Y458 520 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 SNX14Q9Y5W7 946 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 ABCA3Q99758 1704 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 CCDC129Q6ZRS4 1044 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 TSC1Q92574 1164 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 BICC1Q9H694 974 aaKnown RBP8.51□□□□□ -1.05
BEST3-202ENST00000330891 IBTKQ9P2D0 1353 aaPredicted RBP8.51□□□□□ -1.05
BEST3-202ENST00000330891 GIMAP6Q6P9H5 292 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 PI4K2BQ8TCG2 481 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 DDX11Q96FC9 970 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 SUCLG2Q96I99 432 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 MYD88Q99836 296 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 TTC21AQ8NDW8 1320 aa8.51□□□□□ -1.05
BEST3-202ENST00000330891 RUFY3Q7L099 469 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 DRC7Q8IY82 874 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 CNTROBQ8N137 903 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 KIF1BPQ96EK5 621 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 USP25Q9UHP3 1055 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 SMC3Q9UQE7 1217 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 CYP2E1P05181 493 aaPredicted RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 HCLS1P14317 486 aaPredicted RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 DNM1Q05193 864 aaKnown RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 SSH3Q8TE77 659 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 SEC62Q99442 399 aaKnown RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 FSD1Q9BTV5 496 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 COL22A1Q8NFW1 1626 aaPredicted RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 PTMSP20962 102 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 G3BP1Q13283 466 aaKnown RBP eCLIP8.5□□□□□ -1.05
BEST3-202ENST00000330891 PLEKHO1Q53GL0 409 aaPredicted RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 EPHA10Q5JZY3 1008 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 COPS6Q7L5N1 327 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 IP6K1Q92551 441 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 EAF2Q96CJ1 260 aaPredicted RBP8.5□□□□□ -1.05
BEST3-202ENST00000330891 USP16Q9Y5T5 823 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 ARHGEF10O15013 1369 aa8.5□□□□□ -1.05
BEST3-202ENST00000330891 PEAK1Q9H792 1746 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 RAB11FIP4Q86YS3 637 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 XAGE3Q8WTP9 111 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 NEUROD6Q96NK8 337 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 SGSM2O43147 1006 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 RNMTO43148 476 aaKnown RBP8.49□□□□□ -1.05
BEST3-202ENST00000330891 SYT1P21579 422 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 CHST3Q7LGC8 479 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 SIRT1Q96EB6 747 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 LTBP4Q8N2S1 1624 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 A0A087WWV3 80 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 GJB2P29033 226 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 CCDC173Q0VFZ6 552 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 NMIQ13287 307 aaPredicted RBP8.49□□□□□ -1.05
BEST3-202ENST00000330891 UBE3BQ7Z3V4 1068 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 OSBPL3Q9H4L5 887 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 PDRG1Q9NUG6 133 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 PLEKHG1Q9ULL1 1385 aa8.49□□□□□ -1.05
BEST3-202ENST00000330891 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 SALL3Q9BXA9 1300 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 BRD1O95696 1058 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 HSP90AB3PQ58FF7 597 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 ANKLE2Q86XL3 938 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 TTC12Q9H892 705 aaPredicted RBP8.48□□□□□ -1.05
BEST3-202ENST00000330891 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
BEST3-202ENST00000330891 DDX46Q7L014 1031 aaKnown RBP8.48□□□□□ -1.05
BEST3-202ENST00000330891 CKAP2LQ8IYA6 745 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 DBF4Q9UBU7 674 aaPredicted RBP8.48□□□□□ -1.05
BEST3-202ENST00000330891 CAMTA1Q9Y6Y1 1673 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 MST1RQ04912 1400 aa8.48□□□□□ -1.05
BEST3-202ENST00000330891 A0A0D9SFI3 127 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 RAB11FIP3O75154 756 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 HSPA4P34932 840 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 KRT28Q7Z3Y7 464 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 LSG1Q9H089 658 aaKnown RBP8.47□□□□□ -1.05
BEST3-202ENST00000330891 NALCNQ8IZF0 1738 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 SASH1O94885 1247 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 GUCY1B3Q02153 619 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 ZSCAN30Q86W11 494 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 RAPGEF4Q8WZA2 1011 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 SYAP1Q96A49 352 aaPredicted RBP8.47□□□□□ -1.05
BEST3-202ENST00000330891 PKNOX2Q96KN3 472 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 RBM8AQ9Y5S9 174 aaKnown RBP8.47□□□□□ -1.05
BEST3-202ENST00000330891 HSP90B1P14625 803 aaKnown RBP8.47□□□□□ -1.05
BEST3-202ENST00000330891 KIAA2012Q0VF49 1180 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 LRSAM1Q6UWE0 723 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 ZNF589Q86UQ0 364 aaPredicted RBP8.47□□□□□ -1.05
BEST3-202ENST00000330891 ZNF496Q96IT1 587 aaPredicted RBP8.47□□□□□ -1.05
BEST3-202ENST00000330891 SNRKQ9NRH2 765 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 ADCY9O60503 1353 aa8.47□□□□□ -1.05
BEST3-202ENST00000330891 AKAP12Q02952 1782 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms