RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PLEKHO1Q53GL0 409 aaPredicted RBP20.58■□□□□ 0.89
CTHRC1-201ENST00000330295 TLL2Q9Y6L7 1015 aa20.58■□□□□ 0.89
CTHRC1-201ENST00000330295 CYP19A1P11511 503 aaPredicted RBP20.57■□□□□ 0.88
CTHRC1-201ENST00000330295 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
CTHRC1-201ENST00000330295 ZBTB1Q9Y2K1 713 aa20.57■□□□□ 0.88
CTHRC1-201ENST00000330295 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
CTHRC1-201ENST00000330295 CST9Q5W186 159 aa20.56■□□□□ 0.88
CTHRC1-201ENST00000330295 STYK1Q6J9G0 422 aa20.56■□□□□ 0.88
CTHRC1-201ENST00000330295 PRR5LQ6MZQ0 368 aa20.56■□□□□ 0.88
CTHRC1-201ENST00000330295 CCDC24Q8N4L8 307 aa20.56■□□□□ 0.88
CTHRC1-201ENST00000330295 SLC24A1O60721 1099 aa20.54■□□□□ 0.88
CTHRC1-201ENST00000330295 EIF4A2Q14240 407 aaKnown RBP20.54■□□□□ 0.88
CTHRC1-201ENST00000330295 AMOTQ4VCS5 1084 aa20.54■□□□□ 0.88
CTHRC1-201ENST00000330295 CCDC93Q567U6 631 aa20.53■□□□□ 0.88
CTHRC1-201ENST00000330295 TBC1D9BQ66K14 1250 aa20.53■□□□□ 0.88
CTHRC1-201ENST00000330295 GPC2Q8N158 579 aa20.53■□□□□ 0.88
CTHRC1-201ENST00000330295 ZNF277Q9NRM2 450 aaPredicted RBP20.53■□□□□ 0.88
CTHRC1-201ENST00000330295 SRGNP10124 158 aa20.52■□□□□ 0.88
CTHRC1-201ENST00000330295 FKBP4Q02790 459 aaKnown RBP eCLIP20.52■□□□□ 0.88
CTHRC1-201ENST00000330295 C1orf141Q5JVX7 400 aa20.52■□□□□ 0.88
CTHRC1-201ENST00000330295 C7orf43Q8WVR3 580 aa20.52■□□□□ 0.88
CTHRC1-201ENST00000330295 FZD9O00144 591 aa20.51■□□□□ 0.87
CTHRC1-201ENST00000330295 TRAF5O00463 557 aa20.51■□□□□ 0.87
CTHRC1-201ENST00000330295 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
CTHRC1-201ENST00000330295 MASTLQ96GX5 879 aa20.51■□□□□ 0.87
CTHRC1-201ENST00000330295 POLKQ9UBT6 870 aa20.51■□□□□ 0.87
CTHRC1-201ENST00000330295 CIAPIN1Q6FI81 312 aa20.5■□□□□ 0.87
CTHRC1-201ENST00000330295 SAPCD2Q86UD0 394 aa20.5■□□□□ 0.87
CTHRC1-201ENST00000330295 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
CTHRC1-201ENST00000330295 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
CTHRC1-201ENST00000330295 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
CTHRC1-201ENST00000330295 SCN7AQ01118 1682 aa20.48■□□□□ 0.87
CTHRC1-201ENST00000330295 LMOD1P29536 600 aaPredicted RBP20.47■□□□□ 0.87
CTHRC1-201ENST00000330295 HHIPL1Q96JK4 782 aa20.47■□□□□ 0.87
CTHRC1-201ENST00000330295 CARD14Q9BXL6 1004 aa20.47■□□□□ 0.87
CTHRC1-201ENST00000330295 A0A087WZG4 1122 aa20.46■□□□□ 0.87
CTHRC1-201ENST00000330295 NPHP1O15259 732 aa20.46■□□□□ 0.87
CTHRC1-201ENST00000330295 IARSP41252 1262 aaKnown RBP20.46■□□□□ 0.87
CTHRC1-201ENST00000330295 EIF5P55010 431 aaKnown RBP20.45■□□□□ 0.86
CTHRC1-201ENST00000330295 ST5P78524 1137 aa20.45■□□□□ 0.86
CTHRC1-201ENST00000330295 RTKN2Q8IZC4 609 aa20.44■□□□□ 0.86
CTHRC1-201ENST00000330295 NBPF15Q8N660 670 aa20.44■□□□□ 0.86
CTHRC1-201ENST00000330295 CELF2O95319 508 aaKnown RBP20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 EPS15P42566 896 aa20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 SLC39A6Q13433 755 aa20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 HABP4Q5JVS0 413 aaKnown RBP20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 OLFM4Q6UX06 510 aa20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 USP50Q70EL3 339 aaPredicted RBP20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 SLC52A2Q9HAB3 445 aa20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 BCORQ6W2J9 1755 aa20.43■□□□□ 0.86
CTHRC1-201ENST00000330295 SCNN1DP51172 638 aa20.42■□□□□ 0.86
CTHRC1-201ENST00000330295 VSIG10Q8N0Z9 540 aa20.42■□□□□ 0.86
CTHRC1-201ENST00000330295 JDP2Q8WYK2 163 aa20.42■□□□□ 0.86
CTHRC1-201ENST00000330295 SETDB2Q96T68 719 aa20.42■□□□□ 0.86
CTHRC1-201ENST00000330295 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
CTHRC1-201ENST00000330295 NOGQ13253 232 aa20.41■□□□□ 0.86
CTHRC1-201ENST00000330295 SYNE4Q8N205 404 aa20.41■□□□□ 0.86
CTHRC1-201ENST00000330295 ZIC5Q96T25 663 aa20.41■□□□□ 0.86
CTHRC1-201ENST00000330295 NPR1P16066 1061 aa20.4■□□□□ 0.86
CTHRC1-201ENST00000330295 MRC1P22897 1456 aa20.39■□□□□ 0.85
CTHRC1-201ENST00000330295 AEBP1Q8IUX7 1158 aa20.39■□□□□ 0.85
CTHRC1-201ENST00000330295 TBC1D2BQ9UPU7 963 aa20.39■□□□□ 0.85
CTHRC1-201ENST00000330295 SAGE1Q9NXZ1 904 aa20.38■□□□□ 0.85
CTHRC1-201ENST00000330295 STARD3NLO95772 234 aa20.37■□□□□ 0.85
CTHRC1-201ENST00000330295 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
CTHRC1-201ENST00000330295 COL4A5P29400 1685 aa20.37■□□□□ 0.85
CTHRC1-201ENST00000330295 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
CTHRC1-201ENST00000330295 UBR2Q8IWV8 1755 aa20.36■□□□□ 0.85
CTHRC1-201ENST00000330295 TNNT2P45379 298 aaPredicted RBP20.35■□□□□ 0.85
CTHRC1-201ENST00000330295 CTU1Q7Z7A3 348 aaKnown RBP20.35■□□□□ 0.85
CTHRC1-201ENST00000330295 PSMD1Q99460 953 aa20.35■□□□□ 0.85
CTHRC1-201ENST00000330295 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
CTHRC1-201ENST00000330295 SNED1Q8TER0 1413 aa20.35■□□□□ 0.85
CTHRC1-201ENST00000330295 AKAP4Q5JQC9 854 aa20.34■□□□□ 0.85
CTHRC1-201ENST00000330295 GLIS2Q9BZE0 524 aaPredicted RBP20.34■□□□□ 0.85
CTHRC1-201ENST00000330295 ZNF408Q9H9D4 720 aa20.34■□□□□ 0.85
CTHRC1-201ENST00000330295 HPS5Q9UPZ3 1129 aa20.34■□□□□ 0.85
CTHRC1-201ENST00000330295 KLRG2A4D1S0 409 aaPredicted RBP20.33■□□□□ 0.85
CTHRC1-201ENST00000330295 CAMTA2O94983 1202 aa20.33■□□□□ 0.85
CTHRC1-201ENST00000330295 ADARB2Q9NS39 739 aaKnown RBP20.33■□□□□ 0.85
CTHRC1-201ENST00000330295 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
CTHRC1-201ENST00000330295 NBPF5PQ86XG9 351 aaPredicted RBP20.32■□□□□ 0.84
CTHRC1-201ENST00000330295 RNMTO43148 476 aaKnown RBP20.31■□□□□ 0.84
CTHRC1-201ENST00000330295 IL6STP40189 918 aaPredicted RBP20.31■□□□□ 0.84
CTHRC1-201ENST00000330295 TRPA1O75762 1119 aa20.3■□□□□ 0.84
CTHRC1-201ENST00000330295 HUNKP57058 714 aa20.3■□□□□ 0.84
CTHRC1-201ENST00000330295 SULT6B1Q6IMI4 303 aa20.3■□□□□ 0.84
CTHRC1-201ENST00000330295 RNF186Q9NXI6 227 aa20.3■□□□□ 0.84
CTHRC1-201ENST00000330295 GPRC5DQ9NZD1 345 aa20.3■□□□□ 0.84
CTHRC1-201ENST00000330295 AKAP11Q9UKA4 1901 aa20.29■□□□□ 0.84
CTHRC1-201ENST00000330295 ALDH1B1P30837 517 aa20.29■□□□□ 0.84
CTHRC1-201ENST00000330295 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.84
CTHRC1-201ENST00000330295 FAM155AB1AL88 458 aaPredicted RBP20.28■□□□□ 0.84
CTHRC1-201ENST00000330295 NPM2Q86SE8 214 aaKnown RBP20.28■□□□□ 0.84
CTHRC1-201ENST00000330295 LARGE2Q8N3Y3 721 aa20.28■□□□□ 0.84
CTHRC1-201ENST00000330295 PGAP2Q9UHJ9 254 aa20.28■□□□□ 0.84
CTHRC1-201ENST00000330295 KIF23Q02241 960 aaPredicted RBP20.26■□□□□ 0.83
CTHRC1-201ENST00000330295 TTC5Q8N0Z6 440 aa20.26■□□□□ 0.83
CTHRC1-201ENST00000330295 PKN2Q16513 984 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms