RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 OFD1O75665 1012 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 LMTK3Q96Q04 1460 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 PTPRTO14522 1441 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 FIBPO43427 364 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 NUCB1Q02818 461 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 CCDC12Q8WUD4 166 aaPredicted RBP13.39□□□□□ -0.27
COL4A5-201ENST00000328300 TTC37Q6PGP7 1564 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 ME1P48163 572 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 PYM1Q9BRP8 204 aaKnown RBP13.39□□□□□ -0.27
COL4A5-201ENST00000328300 MAP3K19Q56UN5 1328 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 TNMDQ9H2S6 317 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 BOLA2Q9H3K6 86 aa13.39□□□□□ -0.27
COL4A5-201ENST00000328300 CARD14Q9BXL6 1004 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 ARGLU1Q9NWB6 273 aaPredicted RBP13.38□□□□□ -0.27
COL4A5-201ENST00000328300 GRM8O00222 908 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 RNMTO43148 476 aaKnown RBP13.38□□□□□ -0.27
COL4A5-201ENST00000328300 WDHD1O75717 1129 aaPredicted RBP13.38□□□□□ -0.27
COL4A5-201ENST00000328300 ANAPC15P60006 121 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 TNIP1Q15025 636 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 EYA1Q99502 592 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 SMC2O95347 1197 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 PRPF40BQ6NWY9 871 aaKnown RBP13.38□□□□□ -0.27
COL4A5-201ENST00000328300 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
COL4A5-201ENST00000328300 RHPN1Q8TCX5 695 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 MKNK2Q9HBH9 465 aa13.38□□□□□ -0.27
COL4A5-201ENST00000328300 CDR1P51861 262 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 ARHGAP31Q2M1Z3 1444 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 SMTNL1A8MU46 457 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 CRACR2BQ8N4Y2 399 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-201ENST00000328300 CEP57L1Q8IYX8 460 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 XAGE3Q8WTP9 111 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 FAM43AQ8N2R8 423 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 ATP7BP35670 1465 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 KIF5BP33176 963 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 NBPF6Q5VWK0 638 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-201ENST00000328300 ZNF444Q8N0Y2 327 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-201ENST00000328300 NBPF4Q96M43 638 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 RAB34Q9BZG1 259 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 ZNHIT6Q9NWK9 470 aaKnown RBP13.37□□□□□ -0.27
COL4A5-201ENST00000328300 MYO6Q9UM54 1294 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
COL4A5-201ENST00000328300 PDE4BQ07343 736 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 STK3Q13188 491 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 UTP14AQ9BVJ6 771 aaKnown RBP13.36□□□□□ -0.27
COL4A5-201ENST00000328300 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 MTMR7Q9Y216 660 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 IL13P35225 146 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 ATP6V1AP38606 617 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 RAD50Q92878 1312 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 YEATS2Q9ULM3 1422 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
COL4A5-201ENST00000328300 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
COL4A5-201ENST00000328300 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-201ENST00000328300 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-201ENST00000328300 PARP10Q53GL7 1025 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 TET3O43151 1660 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 CTAGE5O15320 804 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 SMARCA5O60264 1052 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-201ENST00000328300 VAMP4O75379 141 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
COL4A5-201ENST00000328300 ANKRD2Q9GZV1 360 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 PPP1R1BQ9UD71 204 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-201ENST00000328300 AATKQ6ZMQ8 1374 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 HLA-DOAP06340 250 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 CATIPQ7Z7H3 387 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 NUP62CLQ9H1M0 184 aa13.35□□□□□ -0.27
COL4A5-201ENST00000328300 ATP2B1P20020 1258 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 COPS6Q7L5N1 327 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL4A5-201ENST00000328300 KDM5CP41229 1560 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 CCAR2Q8N163 923 aaKnown RBP13.34□□□□□ -0.27
COL4A5-201ENST00000328300 GNAT2P19087 354 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
COL4A5-201ENST00000328300 KRT23Q9C075 422 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 ERVK-7P63135 1459 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 KIF20AO95235 890 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 MNS1Q8NEH6 495 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 SYNMO15061 1565 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
COL4A5-201ENST00000328300 NCOA7Q8NI08 942 aa13.33□□□□□ -0.27
COL4A5-201ENST00000328300 ODF2Q5BJF6 829 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 ZNF592Q92610 1267 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 GPTP24298 496 aa13.33□□□□□ -0.28
COL4A5-201ENST00000328300 ERCC4Q92889 916 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms