RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 MYD88Q99836 296 aa22.77■■□□□ 1.24
SPSB1-201ENST00000328089 SMC3Q9UQE7 1217 aa22.77■■□□□ 1.24
SPSB1-201ENST00000328089 BRD1O95696 1058 aa22.76■■□□□ 1.23
SPSB1-201ENST00000328089 HSPA4P34932 840 aa22.76■■□□□ 1.23
SPSB1-201ENST00000328089 ZNF830Q96NB3 372 aaPredicted RBP22.76■■□□□ 1.23
SPSB1-201ENST00000328089 RUFY3Q7L099 469 aa22.76■■□□□ 1.23
SPSB1-201ENST00000328089 ADCY9O60503 1353 aa22.76■■□□□ 1.23
SPSB1-201ENST00000328089 COPS6Q7L5N1 327 aa22.75■■□□□ 1.23
SPSB1-201ENST00000328089 KRT28Q7Z3Y7 464 aa22.75■■□□□ 1.23
SPSB1-201ENST00000328089 FSD1Q9BTV5 496 aa22.75■■□□□ 1.23
SPSB1-201ENST00000328089 REREQ9P2R6 1566 aa22.75■■□□□ 1.23
SPSB1-201ENST00000328089 RAB11FIP3O75154 756 aa22.75■■□□□ 1.23
SPSB1-201ENST00000328089 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
SPSB1-201ENST00000328089 EAF2Q96CJ1 260 aaPredicted RBP22.75■■□□□ 1.23
SPSB1-201ENST00000328089 TAF6LQ9Y6J9 622 aa22.75■■□□□ 1.23
SPSB1-201ENST00000328089 XAGE3Q8WTP9 111 aa22.74■■□□□ 1.23
SPSB1-201ENST00000328089 DNAJC2Q99543 621 aaKnown RBP22.74■■□□□ 1.23
SPSB1-201ENST00000328089 NAP1L2Q9ULW6 460 aaPredicted RBP22.74■■□□□ 1.23
SPSB1-201ENST00000328089 POLA2Q14181 598 aa22.74■■□□□ 1.23
SPSB1-201ENST00000328089 SLFNL1Q499Z3 407 aa22.74■■□□□ 1.23
SPSB1-201ENST00000328089 LSG1Q9H089 658 aaKnown RBP22.74■■□□□ 1.23
SPSB1-201ENST00000328089 ECHDC1Q9NTX5 307 aa22.74■■□□□ 1.23
SPSB1-201ENST00000328089 KCNH5Q8NCM2 988 aa22.73■■□□□ 1.23
SPSB1-201ENST00000328089 CCDC85AQ96PX6 553 aaPredicted RBP22.73■■□□□ 1.23
SPSB1-201ENST00000328089 NRKQ7Z2Y5 1582 aa22.73■■□□□ 1.23
SPSB1-201ENST00000328089 KSR2Q6VAB6 950 aa22.73■■□□□ 1.23
SPSB1-201ENST00000328089 GLRX3O76003 335 aaKnown RBP22.73■■□□□ 1.23
SPSB1-201ENST00000328089 SYT1P21579 422 aa22.72■■□□□ 1.23
SPSB1-201ENST00000328089 USP16Q9Y5T5 823 aa22.72■■□□□ 1.23
SPSB1-201ENST00000328089 GRM8O00222 908 aa22.72■■□□□ 1.23
SPSB1-201ENST00000328089 MCM2P49736 904 aa22.72■■□□□ 1.23
SPSB1-201ENST00000328089 LRRC2Q9BYS8 371 aa22.72■■□□□ 1.23
SPSB1-201ENST00000328089 PDRG1Q9NUG6 133 aa22.72■■□□□ 1.23
SPSB1-201ENST00000328089 RAD50Q92878 1312 aa22.72■■□□□ 1.23
SPSB1-201ENST00000328089 EPHA10Q5JZY3 1008 aa22.71■■□□□ 1.23
SPSB1-201ENST00000328089 ISY1Q9ULR0 285 aaKnown RBP22.71■■□□□ 1.23
SPSB1-201ENST00000328089 R3HCC1Q9Y3T6 440 aaKnown RBP22.71■■□□□ 1.23
SPSB1-201ENST00000328089 ZNF445P59923 1031 aa22.71■■□□□ 1.23
SPSB1-201ENST00000328089 NMIQ13287 307 aaPredicted RBP22.71■■□□□ 1.23
SPSB1-201ENST00000328089 GJB2P29033 226 aa22.71■■□□□ 1.23
SPSB1-201ENST00000328089 RBM10P98175 930 aaKnown RBP22.71■■□□□ 1.23
SPSB1-201ENST00000328089 DNM1Q05193 864 aaKnown RBP22.71■■□□□ 1.23
SPSB1-201ENST00000328089 CLEC17AQ6ZS10 378 aa22.71■■□□□ 1.23
SPSB1-201ENST00000328089 UBE3BQ7Z3V4 1068 aa22.71■■□□□ 1.23
SPSB1-201ENST00000328089 PIK3C2AO00443 1686 aa22.7■■□□□ 1.22
SPSB1-201ENST00000328089 ARHGEF25Q86VW2 580 aa22.7■■□□□ 1.22
SPSB1-201ENST00000328089 SASH1O94885 1247 aa22.7■■□□□ 1.22
SPSB1-201ENST00000328089 LRSAM1Q6UWE0 723 aa22.7■■□□□ 1.22
SPSB1-201ENST00000328089 ZNF496Q96IT1 587 aaPredicted RBP22.7■■□□□ 1.22
SPSB1-201ENST00000328089 CUL4AQ13619 759 aa22.69■■□□□ 1.22
SPSB1-201ENST00000328089 CCDC129Q6ZRS4 1044 aa22.69■■□□□ 1.22
SPSB1-201ENST00000328089 LIMCH1Q9UPQ0 1083 aa22.69■■□□□ 1.22
SPSB1-201ENST00000328089 ZSCAN30Q86W11 494 aa22.69■■□□□ 1.22
SPSB1-201ENST00000328089 GPATCH3Q96I76 525 aa22.69■■□□□ 1.22
SPSB1-201ENST00000328089 STX6O43752 255 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 GIMAP6Q6P9H5 292 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 RBM8AQ9Y5S9 174 aaKnown RBP22.68■■□□□ 1.22
SPSB1-201ENST00000328089 A0A0D9SFI3 127 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 ANAPC15P60006 121 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 KAZALD1Q96I82 304 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 USP25Q9UHP3 1055 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 PXDNQ92626 1479 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 WDR33Q9C0J8 1336 aaKnown RBP22.68■■□□□ 1.22
SPSB1-201ENST00000328089 HCLS1P14317 486 aaPredicted RBP22.68■■□□□ 1.22
SPSB1-201ENST00000328089 CAMK4Q16566 473 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 HSP90AB4PQ58FF6 505 aa22.68■■□□□ 1.22
SPSB1-201ENST00000328089 NEUROD6Q96NK8 337 aa22.67■■□□□ 1.22
SPSB1-201ENST00000328089 SEC62Q99442 399 aaKnown RBP22.67■■□□□ 1.22
SPSB1-201ENST00000328089 TFIP11Q9UBB9 837 aaKnown RBP22.67■■□□□ 1.22
SPSB1-201ENST00000328089 NEXNQ0ZGT2 675 aa22.67■■□□□ 1.22
SPSB1-201ENST00000328089 IGKV5-2P06315 115 aa22.66■■□□□ 1.22
SPSB1-201ENST00000328089 CEBPZQ03701 1054 aaKnown RBP22.66■■□□□ 1.22
SPSB1-201ENST00000328089 C17orf53Q8N3J3 647 aaPredicted RBP22.66■■□□□ 1.22
SPSB1-201ENST00000328089 TSPY26PQ9H489 355 aa22.66■■□□□ 1.22
SPSB1-201ENST00000328089 CYP46A1Q9Y6A2 500 aa22.66■■□□□ 1.22
SPSB1-201ENST00000328089 ZKSCAN1P17029 563 aaPredicted RBP22.66■■□□□ 1.22
SPSB1-201ENST00000328089 AMOTQ4VCS5 1084 aa22.66■■□□□ 1.22
SPSB1-201ENST00000328089 ZNF790Q6PG37 636 aa22.66■■□□□ 1.22
SPSB1-201ENST00000328089 TTC5Q8N0Z6 440 aa22.66■■□□□ 1.22
SPSB1-201ENST00000328089 CEMIPQ8WUJ3 1361 aa22.66■■□□□ 1.22
SPSB1-201ENST00000328089 DDX58O95786 925 aaKnown RBP22.66■■□□□ 1.22
SPSB1-201ENST00000328089 KIF13AQ9H1H9 1805 aa22.65■■□□□ 1.22
SPSB1-201ENST00000328089 FGD1P98174 961 aa22.65■■□□□ 1.22
SPSB1-201ENST00000328089 ME3Q16798 604 aa22.65■■□□□ 1.22
SPSB1-201ENST00000328089 DDX46Q7L014 1031 aaKnown RBP22.65■■□□□ 1.22
SPSB1-201ENST00000328089 ZNF589Q86UQ0 364 aaPredicted RBP22.65■■□□□ 1.22
SPSB1-201ENST00000328089 RUFY2Q8WXA3 655 aa22.65■■□□□ 1.22
SPSB1-201ENST00000328089 MBD3O95983 291 aa22.64■■□□□ 1.22
SPSB1-201ENST00000328089 DNTTIP2Q5QJE6 756 aaKnown RBP22.64■■□□□ 1.22
SPSB1-201ENST00000328089 DDX11Q96FC9 970 aa22.64■■□□□ 1.22
SPSB1-201ENST00000328089 A0A0G2JS52 829 aa22.64■■□□□ 1.21
SPSB1-201ENST00000328089 ZSCAN22P10073 491 aaPredicted RBP22.64■■□□□ 1.21
SPSB1-201ENST00000328089 LINS1Q8NG48 757 aa22.64■■□□□ 1.21
SPSB1-201ENST00000328089 HYPKQ9NX55 129 aa22.63■■□□□ 1.21
SPSB1-201ENST00000328089 CREB3L3Q68CJ9 461 aa22.62■■□□□ 1.21
SPSB1-201ENST00000328089 INTS4Q96HW7 963 aaKnown RBP22.62■■□□□ 1.21
SPSB1-201ENST00000328089 PPP1R9BQ96SB3 815 aa22.62■■□□□ 1.21
SPSB1-201ENST00000328089 BCL11BQ9C0K0 894 aaPredicted RBP22.62■■□□□ 1.21
SPSB1-201ENST00000328089 TPCN1Q9ULQ1 816 aa22.62■■□□□ 1.21
SPSB1-201ENST00000328089 RGPD1P0DJD0 1748 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms